Strigops habroptila (Kakapo): 115608830
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Entry
115608830 CDS
T08851
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shab03016
]
115608830 (TRUB1)
Enzymes [BR:
shab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
115608830 (TRUB1)
Transfer RNA biogenesis [BR:
shab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
115608830 (TRUB1)
Prokaryotic type
115608830 (TRUB1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
115608830
NCBI-ProteinID:
XP_030344108
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Position
5:74228595..74259450
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AA seq
286 aa
AA seq
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MAAREAGGVVLGKAAEKLFSLSGLFAVYKPKGPTSAGVLNLLKERLLAEAGVRTNGNKRN
QVLKIGHGGTLDSAAEGVLVIGIGKGTKMLGSMLAGSKKYTAIGLLGKATDTLDATGKVT
EEKPYDQITKGDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGEAVEAKPARPVR
VYSLSLQQFQPPLFTLDVECGGGFYVRSLVSDIGKELSTCATMQELTRTKHGPFTLEEHA
LHEDKWTIDEIAQSLEHCTSLLPGEPSHKKLKTEHPGETAVSCEDK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagggaggcgggcggcgtggtgctgggcaaggcggccgagaagctcttctcc
ctcagcgggctgttcgccgtgtacaagcccaaggggcccacctctgccggcgtgctcaac
ctgctgaaggagaggctgctggcagaagctggcgtgcgaacaaatgggaacaaaagaaat
caggttttgaaaattggacatggtggaactttggacagtgcagctgaaggagttctggtg
attggtattggaaaaggaacaaaaatgctgggatctatgttggcaggttccaagaaatac
actgccattggactcctgggcaaagctactgatacattagatgctacaggaaaagtcact
gaagaaaaaccttatgaccagataacaaaaggagatcttgaaaatgtgctacagaagttc
acaggggacataatgcaggttcctccactctattctgctttgaagaaggatggagaaagg
ctatcaactctgatgaagagaggagaagcagtcgaagcaaagcctgctcggccagtaaga
gtgtacagcctctctctccagcagttccagccaccactgttcacactggatgttgaatgt
ggcggtggcttttatgtcaggagcctggtcagtgacattggcaaagaactctctacctgt
gccactatgcaagagctgacccgaaccaaacacgggccatttacgctggaagagcatgcc
cttcatgaagacaaatggacaattgatgaaattgcacaatccttagagcattgcacatct
ctcctcccaggagagccatctcataaaaaattgaagacagagcatcctggtgaaactgct
gtgagctgtgaagacaagtga
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