KEGG   Strigops habroptila (Kakapo): 115608838
Entry
115608838         CDS       T08851                                 
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
  KO
K06588  integrin beta 5
Organism
shab  Strigops habroptila (Kakapo)
Pathway
shab04145  Phagosome
shab04148  Efferocytosis
shab04510  Focal adhesion
shab04512  ECM-receptor interaction
shab04810  Regulation of actin cytoskeleton
shab04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:shab00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115608838 (ITGB5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115608838 (ITGB5)
   04148 Efferocytosis
    115608838 (ITGB5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115608838 (ITGB5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115608838 (ITGB5)
   04810 Regulation of actin cytoskeleton
    115608838 (ITGB5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:shab04131]
    115608838 (ITGB5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:shab04515]
    115608838 (ITGB5)
Membrane trafficking [BR:shab04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    115608838 (ITGB5)
Cell adhesion molecules [BR:shab04515]
 Integrins
  Integrin beta subunits
   115608838 (ITGB5)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt PSI_integrin EGF_integrin I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E RNA_pol_A_CTD
Other DBs
NCBI-GeneID: 115608838
NCBI-ProteinID: XP_030344124
LinkDB
Position
5:52909256..52971682
AA seq 811 aa
MPRRGGLSAPAAARRPPPLLLLRLLLLAAPLQPGRGLNLCTSGSATSCEECLLIHPKCAW
CSKEEFGSTKSTTSRCDFLQNLIANGCAGAIENPSSSISVVKNIPLSSKGSGQTHLDVTQ
ITPQKVALNLRPGDKTSFHVQVRQVEDYPVDLYYLMDLSLSMNDDLDNIRNLGTKLAEEM
RKLTSNFRLGFGSFVDKNISPFSYTAPRYQNNPCIGYKLFPSCVPSFGFRHLLSLTDKVD
RFNEEVQKQKVSRNRDAPEGGFDAILQAAVCKEKIGWRKEASHLLVFTTDDVPHIALDGK
LGGLVQPHDGQCHLNEANEYSASSQLDYPSLALLGEKLAENNIHLIFAVTKSHYILYKNF
TALIPGTTVEILHKDSKNIIELIVKAYNSIRSKVELTVWDSPEDIGLTFTATCQDGLSYP
GLRKCGDLKIGDTVSFEVAVEARSCPAEDTSHTFTIKPAGFRDTLEVAVTYNCLCGCTSH
AAPASGKCSGNGTYACGLCECDAGYLGARCECEEGASGDVHQAMCREAEGKPLCSGRGEC
SCNQCLCYESEFGNIYGPFCECDDFSCARYKGVLCSGHGECHCGECKCHAGYIGDNCNCS
TETDGCVSSDGQMCSGRGSCVCGKCQCTEPGAFGETCEKCPTCPGVCSTKRDCIECKLFN
SGRLADNQTCQKHCKDEIITTVDVLETDDPNAILCAYPVNNCVMKFTYLELASGKSNLTV
LKEPACSSAPSAVTIVLAVIGSVVLIGIILLGLWKLLVTIHDRREFDRFQSERSRARYEM
ASNPLYRKPISTHNVEFTFNKLNKSYNGTVD
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgccccgccgaggggggctgtcggcccccgccgccgcccgccggccccccccgctcctc
cttctccgcctcctcctcctggccgctccgctgcagcccggcagaggtctcaatctgtgc
accagcggaagcgccacgtcctgtgaagagtgtcttctcatccatcccaagtgtgcctgg
tgctccaaggaggaatttggcagcactaagtccaccacatcacggtgcgacttcctgcag
aacctgattgcaaacggttgtgccggagccatcgaaaaccccagcagcagcataagcgtg
gtgaagaacatcccactgagcagcaagggctcgggccaaactcacctggatgtcacgcag
atcacacctcagaaggttgccttgaatcttcgtcctggtgacaagacctccttccatgtt
caggttcggcaagttgaggactatccagtggatctgtactacctgatggatctctccctg
tcaatgaatgacgacctagataatattcgcaatctggggacgaagctggctgaagagatg
cgaaagctcactagcaattttcggctggggtttggctctttcgtggacaaaaacatttct
cctttctcctacacagcaccaagataccaaaacaatccctgcattggttacaagctgttc
cccagttgtgtcccatcctttggcttccgccacctcctgtccctaacagataaagtcgac
cgtttcaatgaagaagttcagaaacagaaggtttcccgcaaccgagatgctccagagggt
ggtttcgatgcgattttgcaggctgctgtgtgcaaggagaagattggctggcgtaaggag
gcatctcacctgctggtcttcacaacggatgatgtgccccacatagccctggatgggaag
ctgggggggctggtgcagccccacgatggccagtgccacctgaatgaagccaacgagtac
agtgcatccagccagctggattatccttccctggcacttcttggggagaaacttgctgaa
aacaacatccacctgattttcgctgttacaaaaagtcattacatcctgtacaagaacttc
actgccttgattcctgggacaacagtggagattttgcacaaagactccaagaacatcatc
gagctgatcgtcaaggcctacaacagtattcggtccaaggtagagctcacagtctgggat
agccctgaggacattggcttgaccttcaccgccacgtgccaggatgggttgtcctatcct
gggctcaggaagtgtggggatctcaaaataggagatacggtttccttcgaggtggcggtg
gaggcacggagctgccccgctgaggacacctcccacactttcaccatcaagcccgccggc
tttcgggacacgctggaggtggcggtgacctacaactgcctctgcggctgcaccagccac
gccgcgccggccagcggcaagtgcagcggcaacgggacctacgcctgtgggctgtgcgag
tgcgatgccggctacctgggggccaggtgtgagtgcgaggagggtgccagcggggacgtg
caccaggccatgtgccgggaggcggagggcaagcccctctgcagcgggagaggggagtgc
agctgcaaccagtgcctctgctacgagagcgagtttgggaacatctatgggcccttctgc
gagtgtgatgacttctcctgcgccaggtacaagggagtcctctgctcaggccatggagag
tgtcactgcggggagtgcaagtgccatgcaggttacatcggggacaactgcaactgctcc
actgagacggatggctgtgtgtccagcgacgggcagatgtgcagcggcaggggcagctgc
gtctgcgggaagtgccagtgcaccgagccaggggcttttggagagacgtgtgagaagtgt
cccacctgcccaggtgtctgcagcactaaaagggactgcattgaatgcaagctgtttaac
tcaggaagactggctgataaccaaacctgccaaaagcactgtaaggatgagatcatcacc
actgtggatgttctcgaaacggatgacccaaatgcaattctctgtgcctacccagtgaat
aactgcgtcatgaaattcacctacttggagcttgccagtgggaaatccaacctcaccgtc
ctcaaagagccagcatgcagctcagcccccagcgccgtgacgatcgtgctggcagtgatt
ggcagcgtggtcctgattggcatcatcctgctggggctctggaagctgctcgtcaccatt
catgacaggcgggagtttgaccggttccagagtgaacgttcacgggccagatatgaaatg
gcatccaatcctctctaccgaaagcctatttccacacataacgtagagttcacgttcaac
aagctcaacaagtcttacaacggtacagttgactga

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