Strigops habroptila (Kakapo): 115608838
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Entry
115608838 CDS
T08851
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04145
Phagosome
shab04148
Efferocytosis
shab04510
Focal adhesion
shab04512
ECM-receptor interaction
shab04810
Regulation of actin cytoskeleton
shab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115608838 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115608838 (ITGB5)
04148 Efferocytosis
115608838 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
115608838 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115608838 (ITGB5)
04810 Regulation of actin cytoskeleton
115608838 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115608838 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shab04515
]
115608838 (ITGB5)
Membrane trafficking [BR:
shab04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
115608838 (ITGB5)
Cell adhesion molecules [BR:
shab04515
]
Integrins
Integrin beta subunits
115608838 (ITGB5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
RNA_pol_A_CTD
Motif
Other DBs
NCBI-GeneID:
115608838
NCBI-ProteinID:
XP_030344124
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All DBs
Position
5:52909256..52971682
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AA seq
811 aa
AA seq
DB search
MPRRGGLSAPAAARRPPPLLLLRLLLLAAPLQPGRGLNLCTSGSATSCEECLLIHPKCAW
CSKEEFGSTKSTTSRCDFLQNLIANGCAGAIENPSSSISVVKNIPLSSKGSGQTHLDVTQ
ITPQKVALNLRPGDKTSFHVQVRQVEDYPVDLYYLMDLSLSMNDDLDNIRNLGTKLAEEM
RKLTSNFRLGFGSFVDKNISPFSYTAPRYQNNPCIGYKLFPSCVPSFGFRHLLSLTDKVD
RFNEEVQKQKVSRNRDAPEGGFDAILQAAVCKEKIGWRKEASHLLVFTTDDVPHIALDGK
LGGLVQPHDGQCHLNEANEYSASSQLDYPSLALLGEKLAENNIHLIFAVTKSHYILYKNF
TALIPGTTVEILHKDSKNIIELIVKAYNSIRSKVELTVWDSPEDIGLTFTATCQDGLSYP
GLRKCGDLKIGDTVSFEVAVEARSCPAEDTSHTFTIKPAGFRDTLEVAVTYNCLCGCTSH
AAPASGKCSGNGTYACGLCECDAGYLGARCECEEGASGDVHQAMCREAEGKPLCSGRGEC
SCNQCLCYESEFGNIYGPFCECDDFSCARYKGVLCSGHGECHCGECKCHAGYIGDNCNCS
TETDGCVSSDGQMCSGRGSCVCGKCQCTEPGAFGETCEKCPTCPGVCSTKRDCIECKLFN
SGRLADNQTCQKHCKDEIITTVDVLETDDPNAILCAYPVNNCVMKFTYLELASGKSNLTV
LKEPACSSAPSAVTIVLAVIGSVVLIGIILLGLWKLLVTIHDRREFDRFQSERSRARYEM
ASNPLYRKPISTHNVEFTFNKLNKSYNGTVD
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgccccgccgaggggggctgtcggcccccgccgccgcccgccggccccccccgctcctc
cttctccgcctcctcctcctggccgctccgctgcagcccggcagaggtctcaatctgtgc
accagcggaagcgccacgtcctgtgaagagtgtcttctcatccatcccaagtgtgcctgg
tgctccaaggaggaatttggcagcactaagtccaccacatcacggtgcgacttcctgcag
aacctgattgcaaacggttgtgccggagccatcgaaaaccccagcagcagcataagcgtg
gtgaagaacatcccactgagcagcaagggctcgggccaaactcacctggatgtcacgcag
atcacacctcagaaggttgccttgaatcttcgtcctggtgacaagacctccttccatgtt
caggttcggcaagttgaggactatccagtggatctgtactacctgatggatctctccctg
tcaatgaatgacgacctagataatattcgcaatctggggacgaagctggctgaagagatg
cgaaagctcactagcaattttcggctggggtttggctctttcgtggacaaaaacatttct
cctttctcctacacagcaccaagataccaaaacaatccctgcattggttacaagctgttc
cccagttgtgtcccatcctttggcttccgccacctcctgtccctaacagataaagtcgac
cgtttcaatgaagaagttcagaaacagaaggtttcccgcaaccgagatgctccagagggt
ggtttcgatgcgattttgcaggctgctgtgtgcaaggagaagattggctggcgtaaggag
gcatctcacctgctggtcttcacaacggatgatgtgccccacatagccctggatgggaag
ctgggggggctggtgcagccccacgatggccagtgccacctgaatgaagccaacgagtac
agtgcatccagccagctggattatccttccctggcacttcttggggagaaacttgctgaa
aacaacatccacctgattttcgctgttacaaaaagtcattacatcctgtacaagaacttc
actgccttgattcctgggacaacagtggagattttgcacaaagactccaagaacatcatc
gagctgatcgtcaaggcctacaacagtattcggtccaaggtagagctcacagtctgggat
agccctgaggacattggcttgaccttcaccgccacgtgccaggatgggttgtcctatcct
gggctcaggaagtgtggggatctcaaaataggagatacggtttccttcgaggtggcggtg
gaggcacggagctgccccgctgaggacacctcccacactttcaccatcaagcccgccggc
tttcgggacacgctggaggtggcggtgacctacaactgcctctgcggctgcaccagccac
gccgcgccggccagcggcaagtgcagcggcaacgggacctacgcctgtgggctgtgcgag
tgcgatgccggctacctgggggccaggtgtgagtgcgaggagggtgccagcggggacgtg
caccaggccatgtgccgggaggcggagggcaagcccctctgcagcgggagaggggagtgc
agctgcaaccagtgcctctgctacgagagcgagtttgggaacatctatgggcccttctgc
gagtgtgatgacttctcctgcgccaggtacaagggagtcctctgctcaggccatggagag
tgtcactgcggggagtgcaagtgccatgcaggttacatcggggacaactgcaactgctcc
actgagacggatggctgtgtgtccagcgacgggcagatgtgcagcggcaggggcagctgc
gtctgcgggaagtgccagtgcaccgagccaggggcttttggagagacgtgtgagaagtgt
cccacctgcccaggtgtctgcagcactaaaagggactgcattgaatgcaagctgtttaac
tcaggaagactggctgataaccaaacctgccaaaagcactgtaaggatgagatcatcacc
actgtggatgttctcgaaacggatgacccaaatgcaattctctgtgcctacccagtgaat
aactgcgtcatgaaattcacctacttggagcttgccagtgggaaatccaacctcaccgtc
ctcaaagagccagcatgcagctcagcccccagcgccgtgacgatcgtgctggcagtgatt
ggcagcgtggtcctgattggcatcatcctgctggggctctggaagctgctcgtcaccatt
catgacaggcgggagtttgaccggttccagagtgaacgttcacgggccagatatgaaatg
gcatccaatcctctctaccgaaagcctatttccacacataacgtagagttcacgttcaac
aagctcaacaagtcttacaacggtacagttgactga
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