Strigops habroptila (Kakapo): 115609217
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Entry
115609217 CDS
T08851
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shab01009
]
115609217 (VPS54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115609217 (VPS54)
Protein phosphatases and associated proteins [BR:
shab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115609217 (VPS54)
Membrane trafficking [BR:
shab04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
115609217 (VPS54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
SBP_bac_6
Motif
Other DBs
NCBI-GeneID:
115609217
NCBI-ProteinID:
XP_030344930
UniProt:
A0A672UQ80
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All DBs
Position
6:complement(65227071..65278544)
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AA seq
976 aa
AA seq
DB search
MASSHSSSPVPQSNSSDAFFKKEMDVTKRFRPVQSLPDVCPKEPTGDPHNLCDSPSLVAD
QHRWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGVDFVDTEVTPSFYLPQITKEHFALY
QQEIAPREKVHERCKSICTPKDTFDGTLLHTHDKSRTDLEQVPKIFMKPDFALEDSLTFN
AVLPWSHFSTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLRKTSQAVKLLREKIAQIDKVMCEGSLRVLRLSLTRNNCIKAYNKLKLMATVHQTQ
PTVQLLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YARNDLNRPLEDDCQILEEERLVSLVFGLLKQRKLNFYEIYGDEMIITAKNIIKQCVVNT
VSQIEEIDTEVVVKLADQMRMMNFPQWFDLLKNIFSKFTIFLKRIKATLNTIRSVVFLVL
DKNQKTRDLEDTLQKNSAKDSTVDTEVAYLTHEGMFISDAFSEGDLPPVAADTTSQRNTS
PNSEPCSSDSVSEPECTTDSSSSKEQTSSSVTPGGVEMMISDDMKLTDLELVRLANNIQE
LLYNASDICHDRSVKFLMSRAKDGFLEKLNSNEFVTLSRLMEGFILDTEQICGRKSMSLR
GALQSQANRFVNRFHEERKTKLSLLLDNERWKQAEVPAEFQDLVDSVSDGRISLPEKKPA
ATEERKPAEFLIVEGQKYATVGTVLLLIRIILEYCQCVDNIPSITTDMLTRLSDLLKYFN
SRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPIIRAHFEARLQPKQYSMLR
HFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEAI
YDLLPEEQTQMLFLRINASYKLHLKRQLAHLNVVNDGGPLNGLVTSDVAFYTGNLQALKG
LNNLDLNMAEIWEQKR
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagccacagttcttcaccagtgcctcagtcaaacagcagtgatgctttcttt
aaaaaggaaatggatgtcacgaaacgctttcgacctgtgcagtcactgcctgatgtgtgt
cccaaggaacctacaggcgatccccataatttatgtgacagcccatctctagttgcggat
cagcacagatggactatttatcattccaaagtcaatctcccagcagcactaaatgatcct
aggttagcaaaaagggaatctgatttctttacaaaaacatggggagtggactttgtggac
actgaagtcacgccttcattctacctcccacagatcaccaaggaacattttgcattatac
caacaggaaatcgctccgagagagaaggttcatgaaagatgcaagagcatttgtactcct
aaggataccttcgacgggactctattacacacccacgataaatccaggacagatctggaa
caagtacctaagatttttatgaaaccagattttgcattggaagattccttaacctttaat
gccgttttaccatggtctcattttagtactgctggtgggaaaggaaatcgtgatgcagct
tcctccaagttacttcaagaaaagctgagccattatttggacattgtggaagtcaatatt
gctcatcagatttctctgcgctcagaagcattttttcatgcaatgacctctcagcatgag
ttgcaggactacctcaggaaaacctcccaggctgtaaaattacttagagagaaaatcgcc
caaattgataaagtaatgtgtgaaggatcacttcgagttttaagactgtcactcaccaga
aataactgtataaaagcatacaataaactgaagttaatggctactgtacaccaaacacag
cccacagtacagttgctgctatccacttctgagttcgttggagctttggacttaatagca
accacacaggaggtgttacagcaagagcttcaaggcattcacagtttccggcatcttggc
tcacagctttgtgaactggaaaagctgatagataaaatgatgattgcggagttttcgacg
tacgctcgcaatgatttaaatagacccttagaagatgattgccaaattctagaagaggag
agactggtatcactagtatttggacttctaaaacaaagaaagctaaatttttatgaaata
tatggagatgaaatgattattactgcaaagaacataattaaacagtgtgtggttaatacg
gtatcgcagatagaagaaatagatacagaagtggttgttaagcttgcagaccagatgagg
atgatgaattttcctcagtggtttgatttactgaagaatattttttctaagtttactatc
ttcctcaagaggataaaggcaacattaaatactatccgtagcgtggttttcttggttcta
gacaagaaccaaaaaaccagagacctggaggacaccttacaaaagaactctgctaaggac
agtacggtagacacagaagtggcttacctgactcacgaaggcatgttcataagcgatgcg
ttcagcgaaggggacctcccgcctgtagcagctgacactacctctcaaagaaacacttct
ccaaacagtgagccctgtagcagcgattcggtctctgaaccggaatgcactactgattcc
tcatccagcaaagagcaaacgtcatcttcggttactccagggggagtagagatgatgatc
agtgatgacatgaagctgactgacctggaactggtcaggctggcgaacaatattcaagag
ttactttataatgcctctgatatctgccatgatcgttcagtcaagttcctcatgtcaaga
gcaaaggatggcttcctagagaagctgaattccaatgagtttgttactctttctcgcttg
atggaaggctttatcttggatacggagcagatctgcggcaggaaaagtatgtccttgcga
ggagcgctgcagagtcaagccaatagatttgtgaacagattccatgaggagaggaagacg
aaactaagcctacttttggacaatgagcgctggaagcaagctgaagttcctgccgagttt
caggatcttgttgattcggtgtcagatggcagaatttctctccctgaaaaaaaaccagca
gctactgaagaaagaaagccagctgaattccttattgttgaaggacaaaaatatgcaaca
gttgggacagtattgctgttaataagaataatccttgaatactgccagtgtgtagataac
attccatctatcaccactgacatgcttacccgcctgtctgatttactgaagtatttcaac
tctagaagttgccaactagtgcttggggctggtgcgttacaagttgttggtttgaaaaca
atcactacaaaaaacctagccctttcttcacgttgcctacagctaatcgtacactacatt
cctattatcagggctcattttgaagctcgtctgcagccgaagcagtatagcatgctcagg
cattttgaccacattacaaaggattatcacgaccacatagctgagatttcagcaaagctc
gttgccataatggatagcttatttgacaaactgttatccaagtatgaagtgaaagctcct
gttccttcagcatgcttcaggaatatctgcaagcaaatggcaaagatgcatgaagctata
tatgatctccttcccgaggagcaaactcagatgttgtttttgcgcattaacgcaagctac
aaacttcacttgaagaggcagctggcccacctcaacgtggtcaatgatggaggacctctg
aacggactggttacttcagatgtagctttttacactggaaaccttcaagccctgaaaggc
cttaacaacttagacctaaacatggctgagatttgggagcagaagaggtga
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