Strigops habroptila (Kakapo): 115609276
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Entry
115609276 CDS
T08851
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04517
IgSF CAM signaling
shab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115609276 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115609276 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shab04812
]
115609276 (SPTBN1)
Cytoskeleton proteins [BR:
shab04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115609276 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
115609276 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
115609276
NCBI-ProteinID:
XP_030345104
UniProt:
A0A672TS10
LinkDB
All DBs
Position
6:complement(74610813..74746641)
Genome browser
AA seq
2361 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAGSPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAE
VIQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPP
TPEPSPKVAEDADSQQQWDGTKEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSSK
ESSPAPSPTADRKAKAAIQAQTAATLPAKTQEMPSAQMEGFLHRKHEWETHSKKASSRSW
HNVYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKEAVCEIAVDYKKKKHVFKLRLTDG
NEYLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSPG
KREKDKEKDKEKRFSLFGKKK
NT seq
7086 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacagtagcgacagattacgacaacattgaaatccaacagcagtacagtgat
gtcaacaaccgctgggacgtcgacgactgggacaatgagaatagttcagctcggctgttt
gaacggtcccgcatcaaggccctagctgatgaacgtgaggcagttcagaagaagactttc
acaaagtgggttaattcccatttggcacgtgtatcatgcaggattacagatctgtacacc
gaccttcgagatggaaggatgctcatcaaactgctggaagttctttcaggagagagactt
cctaaaccaactaaaggaaggatgcgcatccattgcctggagaatgttgataaagccctc
cagttcctgaaagagcaaagagtgcacttagaaaacatgggatcccatgatattgtggat
gggaatcacaggctgacgcttggccttatttggactattatcctgagattccagatccaa
gatatcagtgttgagactgaggacaacaaggagaagaagtctgctaaagatgctttgctt
ttgtggtgccagatgaagacagccggttaccccaacgtcaacattcacaacttcacaaca
agctggagggatgggatggctttcaatgcactaatacacaagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gctgagcaacaccttggtcttaccaagctcctggaccctgaggatatcagtgttgaccat
cctgatgaaaagtcaatcatcacctacgtggtgacatattaccactacttctccaagatg
aaagctttagctgttgaaggaaaacgtattggaaaggtgcttgacaatgccattgagaca
gagaagatgattgagaaatatgaatctttggcttctgacctccttgagtggattgagcaa
accatcatcatcctcaacaatcgcaagtttgccaactccctggttggtgtgcagcagcag
cttcaggcattcaacacctaccgcaccgtggagaaaccacccaaatttacagaaaaaggg
aacctggaagtgctgctttttaccatccagagcaaaatgagagccaacaatcagaaagta
tacatgccaagggagggcaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatccgacaggagaaactg
gaacaactcgcacgcagatttgatcgcaaggcagctatgagagaaacctggctgagtgaa
aaccagcgtctcgtctctcaggacaattttggctttgaccttccagcagtagaagctgca
acaaagaagcacgaggccattgaaactgatattgcagcatatgaagaacgagtccaggcc
gtggttgcggttgcaaaggagcttgagactgaaaactaccatgatatcaaacgcattact
gctagaaaggacaacgttatccgcctctgggagtatctcctggagctgctccgcgcacgg
agacagcgcctggagatgaaccttggtctgcaaaagatattccaggaaatgctgtacatt
atggactggatggatgagatgaaggtgcttctgctgtctcaagactatggcaaacacttg
ttaggagttgaagacctgctgcagaaacatgctcttgtggaagctgacattgcaattcag
gctgagagagtgagaggggtcaatgcatctgctcagaagtttgccactgatggagaaggt
tacaagccgtgtgacccgcaggtgatccgggaccgtgttgctcacatggagttctgttac
caagagctgtgccagcttgcggccgagcgccgggcacgcttagaggagtcccggcgcctc
tggaagttcttctgggaaatggctgaagaagaaggttggatcagggagaaggaacagatc
ctgtcatctgatgactatgggaaggacctcaccagtgttgtccgtctcttgagtaagcat
aaggcgtttgaagacgaaatgagtggccgtagtggccacttccagcaggcgatcaaagaa
ggtgaagacatgatcgcggaggagcattttgggtctgagaagatcagagaaagaattaag
gatatccgggagcagtgggctaacttggaacagttatctgccattaggaagaagcgtctg
gaggaagcctctctccttcaccagttccaggctgacgctgatgatattgatgcatggatg
ttggacatcctcaaaattgtctccagcaatgatgttggccacgatgaatattcgactcag
tccttggtcaagaaacacaaagatgtggctgaagagattgcaagctaccggccaaccatt
gactctcttcatgaacaggcgaaggctctgccgcaggaacacgccggctctccagatgtc
caaggcagattgtctggaatagaggaaaggtacaaggaagttgctgagctgactcggctg
cgtaaacaggccttgcaggataccctggctctttataagatgttcagcgaggcagatgct
tgtgagctttggattgacgaaaaggagaagtggctgaataatatgcagattccagagaag
ctggaggacctggaagtgatccagcacagatttgaaagcttagagccagaaatgaacaac
caggcatcgcgtgtggcagtggtgaaccagattgctagacagctaatgcacagcggccac
ccgagcgagaaggagatcaaagcacagcaagacaagctcaacacaagatggagccagttc
agagaattggtggacaggaagaaggatgctctgctctctgccctgagtatccagaactac
caccttgaatgtaatgaaaccaaatcctggatcagggaaaagaccaaagtgatcgaatcc
acacaggatctgggtaatgatctggcaggggtgatggccctgcagaggaagctgacggga
atggaacgtgacctggtggccattgaagccaagctcagtgacctacagaaagaggcggaa
aagctggaatcggagcatcccgaccaggcccaggctattctttcacggcttgcagaaatc
aatgatgtatgggaagaaatgaagaccaccctcaagaaccgggaagagtcccttggagag
gcaagcaaactgcagcagttcctgagggatctggatgacttccagtcctggctgtccaga
acacagactgcaatcgcatccgaagacatgccaaacacactgacggaggcggagaagctg
ctcactcagcatgagaacattaagaatgaaatcaacaattatgaggaagattatcagaaa
atgagggacatgggtgagatggtgacccaagggcaaactgacgctcagtacatgttcttg
cgccagcgcctacaagctttggacactggctggaatgagctccacaaaatgtgggagaac
aggcaaaatctcctgtcccagtctcatgcctaccagctgtttctcagagacaccaagcaa
gcagaagcatttcttaataaccaggagtatgttctggcacacacggaaatgcccactacc
ttggaaggagcagaagctgctattaaaaaacaggaggatttcatgaccacgatggatgcc
aatgaagaaaagatcaatgcagttgtagagactggcaggaggctggttagtgatgggaac
atcaactcggataaaatccaagagaaagtggactctattgatgacagacataggaagaac
cgtgaagcagccagcgagcttctgatgaggctgaaagataacagggatctccagaagttt
ctccaggattgtcaagagctctcactctggatcaatgagaagatgcttacagcccaggac
atgtcctatgatgaggcgaggaacctgcacagcaagtggctgaagcatcaggcttttatg
gcagagcttgcatccaacaaagagtggctggataagattgaaaaggagggaatgcagctc
attgcagagaaaccagagactgaagctgtggtgaaagaaaagctgacaggtctccatcaa
atgtgggaagagctcgaatccactacccagaccaaggctcagcgtctctttgatgcaaac
aaggcagagcttttcacccagagctgtgctgatttggacaagtggctgaatggtttggag
agccagattcagtcggatgactacggaaaagatctcaccagtgtcaacatcctgttgaag
aagcagcagatgctagaaaatcaaatggatgttcgtaagaaggagatcgaggagctgcaa
agccaggcaagggcattgagtcaagaagggaagagtacagatgaggtggatggcaagcgc
cttactgtagaaaagaagtttttggagttgttggagcctttgaatgaaaggaaggcaaac
ctgctggcctccaaagagatccaccagttcaaccgggatgtggaagatgaaattttgtgg
gttggagagaggatgcccatagctacatcaacggatcatggacacaacctccagactgtg
cagctactcataaagaaaaatcagacccttcagaaagaaatccagggacatcagcctcgt
atcgatgacatttttgagaggagtcaaaacatcatcacagagagcagccctaatgctgag
gtgatccagcagagacttgcagacctgaagcagctctggaacctcctcatcgaggagacg
gagaagcgccacaagcgcttggaggagtctcacagagcacagcagtattactttgatgct
gccgaggccgaggcctggatgagtgagcaggagctctacatgatgtcagaagagaaagcc
aaggatgaacagagtgccgtgtccatgctgaagaagcaccagattttggaacaagctgta
gaagactatgctgaaactgtgcaccagctttcaaagaccagcagaactttggtggcagat
aatcacccagaaagtgagcgtatcagcatgcgccagtccaaagtggacaagctgtatgca
ggcctgaaggatctggctgaagagagacggggcaagctggatgagaggcacaggctgttc
cagctgaaccgcgaggtggatgacctggagcaatggattgctgaaagggaggtggtggca
ggatcccacgagctgggacaggattacgaacatgtaacgatgctccaggagcggttccga
gaatttgcccgggacactgggaacattggacaggaacgtgttgacactgtcaaccacatg
gcagatgaactcatcaactctggacactcggatgctgcgaccattgcagagtggaaggat
ggactcaatgaggcctgggctgatctgctggagctcattgacacgagaacacaaattcta
gcagcctcttatgaactgcacaaattttaccacgatgccaaggaaatcttgggacgtatt
caagacaaacataagaaactgcctgaagagcttggtagagaccaaaacacagtggaaacg
ctacagagaatgcacacaacgtttgagcatgatatccaggcactcggcacccaggtgaga
cagctgcaggaggatgctgcacgccttcaggctgcctatgctggagacaaagctgatgac
atccagaagagggaaaacgaggtcctggaagcatggaaggcgctgctggatgcctgtgag
ggccgcagggtgaggctggtggatacaggagacaaattccgcttcttcagcatggttcgt
gacctcatgctttggatggaagatgttatccgacagatagaagcccaggaaaagccaagg
gacgtttcatctgttgaactactaatgaacaatcaccagggaatcaaagcagaaatcgat
gcccggaatgacagctttactacctgcatcgagctcggcaaatctcttctggcaaggaag
cactatgcatccgaggagatcaaggaaaagctgctgcagctgacagagaagagaaaagaa
atgatcgacaaatgggaagacagatgggagtggctgagactgattttggaggtacaccag
ttctccagagacgcgagtgtggctgaggcctggctgctggggcaggagccctacctctct
agtcgtgaaataggccagagcgttgatgaagtggaaaaactgatcaagcggcacgaagcg
ttcgagaagtccgcagctacctgggatgagaggtttgcagcactggaacgactgaccacg
ttggaactgctggaagtacgtcgacaacaagaggaagaggagaggaagagacagcctccc
actccagagcccagcccaaaggttgccgaggatgcagactcccagcagcaatgggatggg
acaaaagaacaggtttcccaaaatggtttgccatcagaccaggaatctccacgggtggca
gaaactgcagaaacaaatgaaatggtcaatggagctgcagaacagaggacaagttcgaag
gagtctagtcctgctccatctccaacggcagaccgcaaagccaaggctgccattcaggcc
cagactgctgctaccctaccagccaaaacacaggagatgccttcagctcagatggagggc
ttcttacatcgcaaacacgagtgggagacacacagcaagaaagcctcgagcagatcatgg
cataacgtgtactgtgtcataaacaaccaagagatgggcttctacaaggattcgaaagct
gctgcttctggcatcccctaccacaatgagattcctgtcagcttgaaggaagcggtctgt
gaaatagcggtcgattataagaagaaaaagcatgtgttcaagctaagattgaccgatggc
aacgaatacctcttccaagccaaagacgatgaggagatgaacacgtggattcaggccatc
acatccgctatctcttctgacaaaatcgaagtgtccccgaccacccagagcactccagcc
tccagccgtgcccagaccctgcctgccagcgtcacaataaccagcgagtccagccctggc
aagcgggagaaagacaaggagaaagacaaggagaaaagattcagcctttttggtaaaaag
aagtga
DBGET
integrated database retrieval system
