Strigops habroptila (Kakapo): 115609403
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Entry
115609403 CDS
T08851
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115609403 (TAF1B)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
115609403 (TAF1B)
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
Motif
Other DBs
NCBI-GeneID:
115609403
NCBI-ProteinID:
XP_030345430
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All DBs
Position
6:47430700..47483158
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AA seq
595 aa
AA seq
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MDEEATRDFNERCAQCSEVNWGLTDGGRFYCRSCHNVTERTREVVNTDFITNTRVQTISK
GSRKQEKTDGGCEWYVCEGFQLVLKKQAEALEALGVCPQMKDEVLWNFWRCYLQRSKQAY
CIRPAGETVKALSPQVCDSSTDVDSDPERPSLLHVLSLSESEGDLQTDNSFASSTSKVSE
CTSLCSGSVDGSLYLKKNQKEKLRMTMPMTLSFCYMALLWLREPVTLSDLLRFVVEGHIP
YLNVFQHFPEKMKLCGVDLKIFCVESWPAYEEVYNKMLELAVFLELPRFPDITDSCFLHP
DMLCMKYLMEANLPDELHNWTCRVVKKIGIGDVDFLTLVPGNKSTAKVKYDILAAAVIVV
VLKLLFLLDDKYEWLLSDFAEERNKNNKEGDPYFEFQKWYKVIKCSLDAKQKKLDEERAK
YLWRCEKPLFYSAKMKSKVLKRRQMVVNLQNQFGKLAGSVRPAEKPNPSSFQLSWSEENT
DGSCFHGHSLKGILQEKCGLLKPMNPDYWLCTVKLCTERSCGHLAHYSREEDFPQSYHFV
LRLFSFLLRIQPSYIHDEVCVIEQKLFNKKFYKKAKIQHRSKEIKRPKNNIIKTM
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaggccacgagagattttaatgaacgctgtgcccagtgttcagaagtgaac
tggggtctcactgatggaggcagattttattgcagatcttgccacaatgttactgagaga
actagagaagttgtaaacactgattttattactaacacgcgagtccaaacaatctccaaa
ggttcaagaaagcaggaaaaaactgatggaggctgtgaatggtatgtttgtgaaggcttt
cagcttgtactcaagaaacaagctgaagctttagaagcattaggagtatgtccacaaatg
aaggatgaagttctatggaatttttggaggtgttaccttcagaggagcaaacaggcatac
tgcatccgaccagctggggagactgtcaaagcattatcaccacaggtatgtgatagcagt
actgatgtggacagtgatccagagaggcctagccttcttcacgtgctgtccctctctgaa
agtgagggggatctgcagaccgataacagctttgcctcgtcaactagcaaggtctcagaa
tgcacctctttgtgctctggatcagtagatggtagcttgtatttaaagaagaaccaaaag
gagaaactgaggatgacaatgccaatgaccctttcattctgttacatggcattactctgg
ctgagagaaccagtgacattatctgacctcttaaggtttgttgttgaaggtcatattcca
tatttgaatgttttccagcattttccggagaagatgaaattatgtggagttgatcttaag
atcttttgtgtagagtcatggcctgcatatgaagaagtatacaacaaaatgcttgagctt
gcagtgtttttagaactgcctcgttttccagatataacagacagctgctttcttcatcca
gacatgttgtgcatgaagtacttgatggaagctaatttacctgatgaattgcataattgg
acttgtcgagtggtgaaaaagatcggtattggagatgtggatttcctgactcttgtgcct
ggaaataagtcaacagcaaaagtgaaatacgacattcttgctgcagcagttattgtagtt
gtgctcaaattattgtttttattagatgataagtatgaatggttactttcagactttgct
gaagaaagaaataaaaacaacaaagaaggtgacccatattttgagttccaaaagtggtac
aaggtgataaaatgttccttggatgcgaagcaaaagaaattagatgaagaaagagccaag
tatttgtggagatgtgaaaagccactgttttattcagccaagatgaaatcaaaagttctt
aagagaagacaaatggttgtgaacttacaaaatcagtttggcaagctggctggttccgtg
cgacctgctgaaaagccaaatccttcaagttttcagttaagttggtcagaagaaaacaca
gatgggagttgttttcacgggcatagcctgaagggaattttgcaagaaaaatgtggttta
cttaaacccatgaaccctgactattggctgtgtacagttaaactatgcactgagagatca
tgtggtcatctggctcattactccagagaagaggactttccccagagttaccattttgta
ctaaggttattctcctttcttctgaggatacagccttcttatatccatgacgaggtgtgt
gtgatagaacagaaactttttaataaaaaattctataaaaaagccaaaatacagcacagg
tctaaggaaataaaaaggcctaaaaataacattattaaaaccatgtaa
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