Strigops habroptila (Kakapo): 115609460
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Entry
115609460 CDS
T08851
Symbol
COL10A1
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
shab
Strigops habroptila (Kakapo)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
115609460
NCBI-ProteinID:
XP_030345604
UniProt:
A0A672TR77
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Position
6:12042921..12049980
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AA seq
676 aa
AA seq
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MYLQISLLLLFCLNVVHGSDGYFSERYQKQSSVKGPHFLPFNVKSQGVQVRGEQGPPGPP
GPIGPRGQPGPAGKPGFGSPGPQGPPGPPGPPGFSAVGKPGVPGLPGKPGERGLNGEKGE
AGPVGLPGPRGPQGPPGTPGPAGLSVPGKPGPQGPPGAQGPRGAPGEKGEPGIPGINGQK
GENGFGIPGRPGNRGLPGPQGPRGLPGPAGVGKPGENGLPGQPGMKGDRGLPGAPGAAGA
PGPQGPPGEPGEVRIGKPGPMGPPGAAGIPGAKGHPGPAGLPGSPGLPGFGKPGLPGMKG
HRGPEGPPGLLGPKGEQGPAGVPGEPGPVGPPGNMGPQGLKGLPGENGLPGPKGDMGPAG
APGFPGAKGERGLPGLEGKPGYPGEQGLAGPKGHPGFPGPKGDTGHAGLPGLPGPMGPQG
VKGVPGMNGEPGPRGPSGIPGTRGPIGPPGLPGAPGAKGEPGAPGLPGPAGISTKGLSGP
MGPPGPPGPKGNTGEPGLPGPPGPPGPPGQAVIPQMPESYVKAGESRELSGMSFMKGVNQ
ALTGMPVSAFSVILSKAYPGATVPIKFDKILYNRQQHYDPRTGIFTCRIPGLYYFSYHVH
AKGTNVWVALYKNGSPLMYTYDEYKKGYLDQASGSAVIDLMENDQVWLQLPNSESNGLYS
SDYVHSSFSGFLFAHI
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtacctacaaatatccctactgctgctgttttgtctgaatgttgtccatggtagtgat
ggatatttttctgagcgataccagaaacaatccagcgtcaaggggccacattttctacca
ttcaatgtaaaaagtcaaggtgtgcaggtaaggggtgaacaaggaccccctggcccccca
ggcccgattggaccaagaggacaaccaggtcccgcaggaaagccagggtttggaagtcct
ggtccccaagggccccctggtcccccaggaccacctggattctctgcggttgggaagcct
ggtgtgccgggtctaccaggaaagccaggagaaagaggactaaatggtgagaaaggagaa
gctggacctgttgggctcccaggaccaagagggccacagggaccccctggcactcccggc
cccgcgggactgtctgtgcctggcaagccaggcccacaaggacctccaggagctcaaggg
ccaaggggcgcccccggtgagaagggagagccaggtatccccggtataaacggacaaaag
ggagagaatggatttggcattccaggccgcccaggtaacaggggtcttccaggcccgcag
ggcccccggggcctccctggtcccgctggggtagggaagcctggtgaaaatggtcttcca
ggtcagccaggtatgaaaggtgacagaggcttaccaggtgcacccggagcagctggagcc
ccaggtccccaggggcctccaggagaacccggggaagttcgcattggcaagcctgggcca
atgggaccaccaggagcagctggcatccccggagccaagggacaccccggacccgcaggc
ttgcctggatccccaggccttccaggatttggaaagccaggactgccagggatgaaggga
cacagagggcctgagggtcctcctggccttctgggacctaaaggagagcaaggcccagcc
ggtgtgccaggagaaccagggcctgtcgggccaccagggaacatgggccctcagggactc
aaaggcttacctggtgagaacggcctgcctgggcccaaaggtgacatgggtcctgcaggc
gccccagggttcccaggggcaaagggcgaacggggtttaccaggattagagggaaaacca
ggatacccaggtgagcagggtcttgctggtcctaagggacacccaggtttcccaggtccg
aaaggcgacaccggccatgctgggctacctggcttgcctggtccgatgggtccgcaagga
gttaagggagtgccagggatgaatggcgagccaggccccaggggcccttcaggaatacct
gggaccagaggccccataggcccccctggcctgccaggagcccctggagcgaaaggcgag
ccaggagcaccaggactgccaggcccggcaggtatatctacaaaaggtttaagcggacct
atgggaccacctgggccccccgggcctaaaggcaacactggagagcctggcttgccaggc
cccccaggtcctcctggtcctcctggccaagccgtaatcccacagatgcctgaaagctat
gttaaagcaggagagtctcgggagctatcaggaatgtccttcatgaaaggagtaaaccaa
gctcttacagggatgccagtgtctgctttcagtgtcatcctctcgaaagcctaccctggg
gcaacagtccccatcaaatttgataaaatcttgtacaataggcagcaacactatgacccc
aggacaggaatcttcacctgcaggattcctggactgtactatttctcctaccacgtacat
gcaaaaggaacaaatgtttgggttgcactctacaaaaatggttccccactcatgtacacc
tatgacgagtacaagaaaggataccttgaccaggcttctggcagtgctgtcatcgatctc
atggagaacgatcaagtatggctccaactgcccaattcagaatctaatggtctctattcc
tctgactatgttcactcttctttctcaggtttcctatttgctcatatctaa
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