KEGG   Strigops habroptila (Kakapo): 115609460
Entry
115609460         CDS       T08851                                 
Symbol
COL10A1
Name
(RefSeq) collagen alpha-1(X) chain
  KO
K19479  collagen type X alpha
Organism
shab  Strigops habroptila (Kakapo)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 115609460
NCBI-ProteinID: XP_030345604
UniProt: A0A672TR77
LinkDB
Position
6:12042921..12049980
AA seq 676 aa
MYLQISLLLLFCLNVVHGSDGYFSERYQKQSSVKGPHFLPFNVKSQGVQVRGEQGPPGPP
GPIGPRGQPGPAGKPGFGSPGPQGPPGPPGPPGFSAVGKPGVPGLPGKPGERGLNGEKGE
AGPVGLPGPRGPQGPPGTPGPAGLSVPGKPGPQGPPGAQGPRGAPGEKGEPGIPGINGQK
GENGFGIPGRPGNRGLPGPQGPRGLPGPAGVGKPGENGLPGQPGMKGDRGLPGAPGAAGA
PGPQGPPGEPGEVRIGKPGPMGPPGAAGIPGAKGHPGPAGLPGSPGLPGFGKPGLPGMKG
HRGPEGPPGLLGPKGEQGPAGVPGEPGPVGPPGNMGPQGLKGLPGENGLPGPKGDMGPAG
APGFPGAKGERGLPGLEGKPGYPGEQGLAGPKGHPGFPGPKGDTGHAGLPGLPGPMGPQG
VKGVPGMNGEPGPRGPSGIPGTRGPIGPPGLPGAPGAKGEPGAPGLPGPAGISTKGLSGP
MGPPGPPGPKGNTGEPGLPGPPGPPGPPGQAVIPQMPESYVKAGESRELSGMSFMKGVNQ
ALTGMPVSAFSVILSKAYPGATVPIKFDKILYNRQQHYDPRTGIFTCRIPGLYYFSYHVH
AKGTNVWVALYKNGSPLMYTYDEYKKGYLDQASGSAVIDLMENDQVWLQLPNSESNGLYS
SDYVHSSFSGFLFAHI
NT seq 2031 nt   +upstreamnt  +downstreamnt
atgtacctacaaatatccctactgctgctgttttgtctgaatgttgtccatggtagtgat
ggatatttttctgagcgataccagaaacaatccagcgtcaaggggccacattttctacca
ttcaatgtaaaaagtcaaggtgtgcaggtaaggggtgaacaaggaccccctggcccccca
ggcccgattggaccaagaggacaaccaggtcccgcaggaaagccagggtttggaagtcct
ggtccccaagggccccctggtcccccaggaccacctggattctctgcggttgggaagcct
ggtgtgccgggtctaccaggaaagccaggagaaagaggactaaatggtgagaaaggagaa
gctggacctgttgggctcccaggaccaagagggccacagggaccccctggcactcccggc
cccgcgggactgtctgtgcctggcaagccaggcccacaaggacctccaggagctcaaggg
ccaaggggcgcccccggtgagaagggagagccaggtatccccggtataaacggacaaaag
ggagagaatggatttggcattccaggccgcccaggtaacaggggtcttccaggcccgcag
ggcccccggggcctccctggtcccgctggggtagggaagcctggtgaaaatggtcttcca
ggtcagccaggtatgaaaggtgacagaggcttaccaggtgcacccggagcagctggagcc
ccaggtccccaggggcctccaggagaacccggggaagttcgcattggcaagcctgggcca
atgggaccaccaggagcagctggcatccccggagccaagggacaccccggacccgcaggc
ttgcctggatccccaggccttccaggatttggaaagccaggactgccagggatgaaggga
cacagagggcctgagggtcctcctggccttctgggacctaaaggagagcaaggcccagcc
ggtgtgccaggagaaccagggcctgtcgggccaccagggaacatgggccctcagggactc
aaaggcttacctggtgagaacggcctgcctgggcccaaaggtgacatgggtcctgcaggc
gccccagggttcccaggggcaaagggcgaacggggtttaccaggattagagggaaaacca
ggatacccaggtgagcagggtcttgctggtcctaagggacacccaggtttcccaggtccg
aaaggcgacaccggccatgctgggctacctggcttgcctggtccgatgggtccgcaagga
gttaagggagtgccagggatgaatggcgagccaggccccaggggcccttcaggaatacct
gggaccagaggccccataggcccccctggcctgccaggagcccctggagcgaaaggcgag
ccaggagcaccaggactgccaggcccggcaggtatatctacaaaaggtttaagcggacct
atgggaccacctgggccccccgggcctaaaggcaacactggagagcctggcttgccaggc
cccccaggtcctcctggtcctcctggccaagccgtaatcccacagatgcctgaaagctat
gttaaagcaggagagtctcgggagctatcaggaatgtccttcatgaaaggagtaaaccaa
gctcttacagggatgccagtgtctgctttcagtgtcatcctctcgaaagcctaccctggg
gcaacagtccccatcaaatttgataaaatcttgtacaataggcagcaacactatgacccc
aggacaggaatcttcacctgcaggattcctggactgtactatttctcctaccacgtacat
gcaaaaggaacaaatgtttgggttgcactctacaaaaatggttccccactcatgtacacc
tatgacgagtacaagaaaggataccttgaccaggcttctggcagtgctgtcatcgatctc
atggagaacgatcaagtatggctccaactgcccaattcagaatctaatggtctctattcc
tctgactatgttcactcttctttctcaggtttcctatttgctcatatctaa

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