Strigops habroptila (Kakapo): 115609568
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Entry
115609568 CDS
T08851
Symbol
PUS10
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10 isoform X1
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shab03016
]
115609568 (PUS10)
Enzymes [BR:
shab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
115609568 (PUS10)
Transfer RNA biogenesis [BR:
shab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
115609568 (PUS10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
YicC-like_C
Motif
Other DBs
NCBI-GeneID:
115609568
NCBI-ProteinID:
XP_030345802
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All DBs
Position
6:72186273..72218675
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AA seq
539 aa
AA seq
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MREFSSMSSLTEKDRPIVQLLLNTGTCPRCILRFCSVGSQMLYRHSYKDLMKVLKEFLKN
NQEKEDTVCFDVADPPCKRIRLEHPEEGPEDLNHNGALQQIPCVDDENTAMENSAVKACN
VCLGILQEFCETDFVKKVCQKVNSADYQFTSFVFSVSLPPQLSVRERAAWLVLKQEMRNL
GLSLAKDDIVQLKEAYKWIIHPQLSEELGVPADGKSLFEVSVVFAHPETDEECHFLATAC
PDCFKPAKNKQSVFTRMAVIKALEKIKEEDFLKHFPCPPSSPKNLCVALEIQCNNGAVFV
AGRYNKYSRNLPQTPWIIDGERKLESSVEELISEHLMAEFKADSFNFSSSGREDVDVRTL
GNGRPFAIELVNPRRIHFTAEEMKRLQQTINTSSDKIQVRDLQLVTREAIGRMKEGEEEK
TKTYSALIWTDKAIQKEDIAFLDDIKELKLDQKTPLRVLHRRPLAVRCRIIHTMRSEYID
EHHFRLHLKTQAGTYIKEFVHGDFGRTKPNIGSLLNRTADILELDVESVDVDWPPTLDN
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattctccagcatgtcttccctaacagaaaaggacagaccaattgttcagctg
ttactgaacactggcacttgcccacggtgtattttgaggttctgcagcgtgggatcacag
atgctttatagacattcatacaaggatttgatgaaggttttaaaagaatttctgaaaaat
aatcaagaaaaagaagatacagtttgttttgatgtagctgaccctccttgtaagagaatc
agacttgaacacccagaagaagggcctgaggatctgaaccacaatggagcactccagcag
attccttgcgttgatgatgaaaatactgcaatggaaaactcagctgtgaaggcttgcaat
gtgtgtttgggaattcttcaggagttctgtgagaccgactttgttaaaaaggtgtgtcaa
aaggttaattctgctgattaccagttcactagttttgtattttctgtgtcactgccccca
cagctgtctgtaagggagcgtgctgcttggctggtgttaaaacaggaaatgagaaatctg
ggcctttccttggcaaaggatgacattgttcagctgaaagaagcttataagtggattatt
catccccagttgtctgaagagttgggtgttcctgctgatggaaagagtttgtttgaagtt
agtgtggtcttcgctcacccagaaacagatgaggagtgccatttcctagccacagcctgt
ccagactgtttcaaaccagcaaagaacaaacagtctgttttcactagaatggcagttata
aaagccctagagaagataaaagaagaggattttctcaagcattttccatgtcccccaagt
tcaccaaagaacctctgtgttgctctggaaattcagtgcaataatggtgcagtttttgtg
gctggaagatacaacaaatactcaaggaatttacctcagactccctggattattgatggg
gagcggaagctggaatcctcagtggaagagctgatttcagagcatctaatggcagaattc
aaagcagatagctttaatttttcttcctctggaagagaagatgtggatgtaagaacacta
ggcaatggaaggccctttgcaattgagcttgtgaatcctcgtagaatacattttactgct
gaggaaatgaagagacttcagcagacaattaatacctcttcagacaaaatacaggttcga
gatttacagcttgtcaccagagaggcaattggtcgtatgaaagaaggtgaagaggaaaag
acaaagacctacagtgccttaatatggacagacaaagcaatacagaaagaagatattgca
tttctagatgatatcaaggagttaaaacttgaccagaagacacctctgcgggttcttcac
aggaggcctctcgctgtaagatgtcgcatcattcacaccatgagatctgagtacatagat
gagcatcattttcgcctgcacctgaagactcaggcaggaacctacattaaagaatttgtg
catggagactttgggagaacaaagcccaatattggctccctgctgaacagaactgctgac
attctggagctggatgtagaatctgttgatgttgactggcctccaaccttggataattaa
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