Strigops habroptila (Kakapo): 115609587
Help
Entry
115609587 CDS
T08851
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shab03016
]
115609587 (CDKAL1)
Enzymes [BR:
shab01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
115609587 (CDKAL1)
Transfer RNA biogenesis [BR:
shab03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
115609587 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
115609587
NCBI-ProteinID:
XP_030345850
UniProt:
A0A672TFT3
LinkDB
All DBs
Position
1:92915765..93311181
Genome browser
AA seq
585 aa
AA seq
DB search
MKKMPAACDSALEDIEDIVSAEDLKPHDRQFVMKNVFPKVRKRNSQKDTQADDDPPSDSI
IPGAQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITDNSAEADLWLLNSCTVKNPAEDHF
RNSIKKAQEEKKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLL
GQKKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPVEELV
DRAKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEAIPEGAMLRLGMTNPPYIL
EHLEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKQVVDFLKAKVPGITIA
TDIICGFPGETDEDFQETVKLVEQYRFPSLFINQFYPRPGTPAAKMRQVPAAVKKQRTKD
LSQLFHSYNPYDHKVGERQRVLVTEESFDSNYYVAHNPFYEQVLVPKDPLLMGKMVEVNI
YEAGKHFMKGQPVSDARVYTASITRPLAKGEVSGLTGVFRHAPQNGTNWKAHPSAEIPVK
TPLGSWMALQLPWQQEGGGLKILSVSLALLAALVMFYYGGMKTEL
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatgcctgctgcctgtgattcggcgcttgaagatattgaagatatcgtgtca
gcagaagacttgaaaccacatgatcggcaatttgtaatgaagaatgtttttccaaaagta
cgaaaacgcaattcacaaaaagatactcaggcagatgatgatcccccaagtgacagcatt
attcctggtgctcagaaaatctggattcgtacatggggatgttctcacaataattcggat
ggtgaatatatggctggacagctggctgcatatggatacaaaattacagacaactctgct
gaagcagatttatggctgctgaacagttgtacagtaaaaaatcctgctgaggaccacttc
agaaactcaataaagaaagcccaagaagagaagaagaaagtggttctagcaggctgtgtg
ccacaagcccaacctcgtcaggactacctgaaaggcttgagtattataggggttcagcag
atagatcgtgtagtagaagttgtggaggaaactattaaaggtcattctgtgagactgctg
ggtcagaaaaaggataatggaaaacgtctggggggagcacgactggatttgccaaagatt
aggaagaatccgctgatagaaataatttccatcaatacaggatgtctcaatgcatgtacc
tactgcaaaaccaagcacgccagaggagatctagcaagttatccagttgaagaactggtg
gacagagcgaaacagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagac
acaggggcttatggcagagacattggcacagacctccctacgcttctgtggaagctggtt
gaagctattcccgagggagctatgctgaggcttggcatgacgaaccctccctatatttta
gagcatctggaggaaatggcaaagattctcaatcatccaagagtatatgcttttctgcac
atacctgtccagtcagcctctgacagcgtgctcatggacatgaaaagagaatactgcgtg
gcagacttcaaacaagtagtggatttccttaaagcaaaagtgcctggaataacaattgct
acagacatcatctgtggttttccaggagagactgatgaagattttcaagaaacagtgaaa
cttgtagaacagtacagatttccaagcttgtttattaatcaattttacccacgccccgga
accccagctgcaaaaatgcgtcaagttccagctgcagtgaaaaaacagagaacaaaggat
ctgtcccagctgtttcattcatacaatccatatgaccataaggttggtgagaggcagaga
gttctggtaacagaagaatcctttgattccaattactatgttgctcacaatcctttctat
gagcaggttcttgtaccaaaggatcctttgttaatgggtaaaatggtcgaagtgaatatt
tatgaagctgggaaacatttcatgaaggggcaaccagtatcagatgccagagtttacact
gcatccatcactagaccattagcaaaaggagaagtttctggtttaacaggggtgttcaga
catgcaccacagaatggcacaaactggaaagctcacccttctgctgagatcccagtgaaa
acaccactcggctcatggatggctttgcagctcccatggcaacaagaaggaggtggactg
aagatactgtctgtcagcctggctctactggcagctcttgttatgttttactatggtgga
atgaaaacagaactgtga
DBGET
integrated database retrieval system
