Strigops habroptila (Kakapo): 115609611
Help
Entry
115609611 CDS
T08851
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115609611 (RIMS1)
Membrane trafficking [BR:
shab04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
115609611 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
115609611 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
115609611
NCBI-ProteinID:
XP_030345891
LinkDB
All DBs
Position
6:complement(31797495..32106832)
Genome browser
AA seq
1662 aa
AA seq
DB search
MSSSVGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLNLDTCG
ISDPSRHDFKTASREKTAFSWSDGSVLKQWRLHQQFESYKEQVRKIGEEARRYQGEHKDD
APTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEIL
TKSGAWFFGSGPQPSPSQDGTLSDTATGGSSDAPREKKARLQERSRSQTPLSTATASSQE
ISSASVQSDHRKGAEVSQPAMGVDQKQVSSRSRSEPPRERKKTISVSDQNGKVLKSERKR
VPKSSLQKEGPADDRERKERREGRRLEKGKSQDLPEKLEEGKVPDDETQRKEDEYHTRYR
SDPNLARYPVKPHPEEQQMRMHAKVSKARHERRHSDVALAHTEMEEAEVPENKLGKRSQL
QGTQDRKSLVETQRSYSIDRTGDVRISVSKQLTNHSPPTPRHSPVPIEHIEYKNHDSFKK
QSRLDPSSAILMRKAKREKMETMLRNDSLSSDQSESVRPSPPKPHRAKRGGKKRQMSVSS
SEEEGASTPEYTSCEDVEIESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKE
GDRLIGRVILNKRTTMPKESGALLGLKVVGGKMTELGRLGAFITKVKKGSLADVVGHLRA
GDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPETSHPPLESSSS
SFESQKMERPSISVISPTSPGALRDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPPR
ADGRPRNPYVKMYFLPDRSDKSKRRTKTVKKSLEPKWNQTFLYSHVHRRDFRERMLEITV
WDQPRVQEEESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFTPRRHVHGG
ESTSKKLQRSRPISDSDISDYDVDDGIGVVPPVGYRSSTRESKSTTLTVPEQQRTTHHRS
RSVSPHRGDDQGRTRSRLPNVPLQRSLDEIHQMRRSRSPTRHHDASRTPVDYRSRDMDSQ
YLSDQESELLMLPRAKRGRSAECLHTISELQPSLDRARSASTNCLRPDTSLHSPERERGR
WSPSLERRRPTSPRIHIQHASPEDDRQSRKVERYSSQKQTRKVSATETERGLLPCVSRRG
LPTPRTTEQPVIRGKHHARSRSSEHSSIRPLCSVHHLAPGGSAPPSPLLTRIHQQGSPTQ
SPPADTSFSSRRGRQLPQVPVRSGSIEQASLVVEERTRQMKMKVHRYNQTSGSGSSQEYE
REQYTKYNIQTDQYRSCDNVSAKSSDSDVSDVSAISRTSSASRLSSTSFMSEQSERPRGR
IGGTGAGHHICWEGNLLGGTAGLLLNNTFTPKMQGRRMGTSGRITKSTSVSGEMYKLEHN
DGSQSDTAVGMVGTGGKKRRSSLSAKVVAIVSRRSRSTSQLSQTEAGSKKLKSTIQRSTE
TGMAAEMRSRMVRQPSRESTDGSINSYSSEGNLIFPGVRLGADSQFSDFLDGLGPAQLVG
RQTLATPAMGDIQIGMVDKKGQLEVEVIRARGLTQKPGSKSTPAPYVKVYLLENGACIAK
KKTRIARKTLDPLYQQTLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSS
VVIGWYKLFPPSSLVDPTLTPLTRRASQSSLESSTGPPCIRS
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcggtggggccccgcggccctcgcccgcccacggtgccccccccgatgcag
gagctgcccgacctgagccacctgacagaggaggagaggaacattatcatggcagtgatg
gaccggcagaaagaagaggaggagaaagaagaggccatgcttaacttggatacctgtgga
attagtgacccttctagacatgatttcaaaactgcttcacgggagaaaactgctttcagt
tggtcagacggttctgtcttaaaacaatggaggttgcatcaacaatttgaaagctataaa
gaacaagtaagaaagataggggaagaagcccgccgttaccagggagagcacaaggatgat
gctccaacatgtggaatctgtcataaaacaaagtttgcagatggttgtggccatttatgc
tcttattgccggaccaagttttgtgctcgatgtggaggtcgtgtctctctgcgatcaaac
aatgaggacaaagtggttatgtgggtatgcaatttatgtcgaaagcaacaggaaatccta
acgaaatctggagcgtggtttttcggaagtggaccacagccctcgcccagccaggatgga
acgctgagtgatacagcaactggtggaagctcagatgcaccaagagagaagaaagcaaga
cttcaagagcgatcgagatcacagactcccttaagtacagcaactgcctcatcacaggaa
atctcttctgccagtgtgcagtctgaccataggaaaggagcagaagtatcacagccagct
atgggcgtggaccaaaagcaagtttcatcaaggtctagaagtgaacctccaagagagagg
aagaagacaatatcagtttcggaccagaatggcaaagttttaaagagtgagcgtaagcgt
gtgccaaaatcctcgcttcagaaagaaggaccagcagatgacagggagcgtaaagaacga
cgtgaaggtagaaggctggagaagggcaagtcacaggacctgccagagaaacttgaggaa
ggcaaagtgcctgacgatgaaacacaaaggaaggaagatgaatatcatacccgttacagg
agtgaccccaatctggcaagataccctgtaaaacctcatcctgaggaacagcagatgcgc
atgcatgcaaaagtttctaaagcacgacatgagagaagacacagtgatgtagctttggca
catacagaaatggaggaagcggaggtacctgagaataaattaggaaaacgctcacaatta
cagggaactcaggacagaaaatctcttgtggaaactcagaggtcgtactctatagacaga
acaggtgatgtaagaatttctgtttctaaacaattaactaatcatagcccaccaactccc
aggcatagtccagttcctatagaacacatagaatacaagaaccacgattcctttaaaaaa
cagagccgccttgatcctagctctgctattctcatgcgaaaagcaaagcgggagaaaatg
gagaccatgctaaggaatgattcccttagctctgaccagtcggaatcagtgcggccatcc
cctccaaagcctcatagagcaaaaagaggcggaaagaaaaggcagatgtcagttagtagc
tcagaggaagaaggggcatcaacaccagaatatactagctgtgaagatgtggagatagaa
agtgaaagtgtcagtgaaaaaggtgacttggattattactggctggatcctgccacgtgg
cacagcagggagacatcccccattagttcgcatcccgtaacgtggcagccttctaaagag
ggagatcgcttaattgggcgtgttattctcaacaagagaacaaccatgccaaaagaatca
ggtgcattactggggctaaaagttgttggaggaaaaatgacagaattaggacgactcggt
gccttcattaccaaagtgaagaaaggtagcttggctgatgtggtggggcatctcagagca
ggggatgaagttctagaatggaatggtaaacccttgcctggagctacaaatgaagaagtt
tacaacattattttagaatcaaaatcagaacctcaagttgaaattattgtttcaaggcct
attggtgatattccacggattcccgagacttctcaccccccgttagagtctagttcaagt
tcttttgaatctcagaagatggaaaggccttctatttctgttatatctccgaccagccct
ggagccctacgggatgcaccacaagtcctaccagggcagctttctgttaaactgtggtac
gacaaagtgggacatcagttaatagtaaatgttctgcaagcaacagatttgccaccaaga
gcagatggacgccctaggaatccctatgtgaaaatgtactttcttccagacagaagtgat
aagagtaaaaggaggaccaaaacagtaaagaaaagtctagagccaaaatggaaccaaact
tttctctactcacatgtacatcgtagagattttagagaacgaatgcttgaaataaccgta
tgggatcagccaagagtacaagaagaagagagtgaatttcttggagagattcttatagag
ctggagacagcccttttagatgatgaaccacattggtataagctacagacacatgatgaa
tcttcactacctctgcctcagccatcacctttcacgccaagaagacatgttcatggtgga
gaaagcactagcaaaaaattacaaagatctcggccaatcagtgatagtgacatctcagat
tatgatgttgatgatggtattggagttgttcctccagttggttatagatctagtactaga
gaaagtaaatctacaacgctaactgtgccagaacagcaaagaacaacacatcatcgttca
cgatctgtatctcctcaccgtggtgacgatcagggcaggacccgttcacgtttaccaaat
gtgccattacagaggagtttagatgaaattcatcaaatgagaagatcacgttctccaact
agacaccatgatgcctccagaactccagttgattacagatccagagacatggatagtcag
tatttgtctgatcaagaaagtgagcttcttatgctgcccagagcaaaacgaggaagaagt
gcagagtgcctacataccatcagtgaactacagccctcccttgacagggctaggagtgct
agtaccaactgcttgagaccagatactagtttgcattcaccagaacgagaaaggggtaga
tggtccccctccctagagaggagacgacctactagtcccaggattcatatccagcatgca
tctccggaggatgacaggcaatccagaaaagtggaaagatatagcagccaaaaacaaact
aggaaagtctccgcaactgaaacagaaagggggctgctaccatgtgtttctagaagggga
cttccaaccccacgaacaactgaacagccagtcattaggggaaaacatcacgctcgctca
aggtcgagtgagcactctagtatcagacccttatgctctgtacatcacctagcgcccgga
gggtcggcgccaccttctccacttctgacaagaatacatcaacaaggaagtcccacacag
tctcctcctgcagacacatccttcagcagtcgcaggggaagacagctaccgcaagttcca
gtaagaagtggcagtatagagcaagcaagcttagtagtggaggagcgaacaagacagatg
aaaatgaaagtgcaccgttataatcagacatcagggtctggttctagccaagaatatgag
cgtgagcaatataccaagtataatatacaaacagatcagtacagaagttgtgataacgtc
tctgccaaatcatcagatagtgatgtcagtgatgtgtcagccatttcccgaaccagcagt
gcctcacgtctcagcagcacaagttttatgtcggagcaatctgaacgccctcgtggcaga
atcggagggacaggagcaggccatcacatctgctgggaagggaacctgctcggagggaca
gcaggactgttgctcaacaatacatttactcctaaaatgcaaggcagacggatggggact
tcagggagaatcactaagagcacaagtgtcagcggagagatgtataagctggagcacaat
gacgggagtcagtcagacacggctgtcggcatggttggaacaggtgggaagaaaaggcgt
tccagccttagtgccaaagtggttgccatagtgtctcgaaggagcagaagcacatctcaa
cttagccaaacagaggctggcagcaagaagctaaagagcacgatacagagaagcacagag
acaggaatggcggcagagatgagaagtcgcatggttcgacagccaagtcgggaatccact
gacggcagcataaacagttatagctccgagggcaacttaatattccctggagtacggctg
ggcgctgacagtcagtttagtgatttccttgatggacttggacctgcacagttagtaggc
cgacaaacattagcaactcctgccatgggtgacatccagattggaatggtggacaaaaag
ggccagttagaagtagaagtcattagagcccgcggcctcacacaaaaacctggctccaaa
tctaccccagctccgtatgtcaaagtgtatttattggaaaatggagcatgtatagctaag
aagaagacaagaattgcacggaagacccttgatcctttgtaccaacagacactggttttt
gatgaaagtccacagggtaaagtccttcaggtaatagtttggggagactatggccgaatg
gaccacaaatgcttcatgggagttgcccagatccttctggaggaactggatctgtccagt
gtggtaataggctggtataaattatttccaccttcatcactagtggatccaaccttgact
cccctgacacgcagggcttcccagtcatctctggaaagttcaactgggcctccctgtatt
agatcatag
DBGET
integrated database retrieval system
