Strigops habroptila (Kakapo): 115609734
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Entry
115609734 CDS
T08851
Symbol
LAMA4
Name
(RefSeq) laminin subunit alpha-4
KO
K06241
laminin, alpha 4
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04510
Focal adhesion
shab04512
ECM-receptor interaction
shab04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115609734 (LAMA4)
04518 Integrin signaling
115609734 (LAMA4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115609734 (LAMA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_I
Laminin_II
EGF_laminin
EGF_LMN_ATRN
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
115609734
NCBI-ProteinID:
XP_030346204
LinkDB
All DBs
Position
6:13831602..13931236
Genome browser
AA seq
1827 aa
AA seq
DB search
MALISAWPFVSPILFFLRCFSSSTASSEGGVFQFDIEGSAAVSTQEATVIRGQQQAVATG
SWVPFAEECQEGFYRTSSGKCSPCDCNGNANRCLDGSGICVDCQRNTTGQHCEQCPDGFI
GDVVRGVPTFCQPCPCPLPALANFAVSCYRKSGSVRCVCKENYAGPNCERCAPGYYGNPL
LIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYYGDARFAKNC
TECNCGGRMCDSQTGECLADSPQVSTGTDCPTISCDKCIWDLTDDIRLAVLAIDESKSTL
LSISTGVAAQKRLNDLNLTTTHLQAAMSKKKNHAVLWTIQVDDAADETNDLLREAATLDE
QGNEASSKGLLIQRETIETNNRATQLVHQLSNMRDNIQEISSKMNYYAIQQELSPEEIAQ
KLSAAEETLKEIRSHKPFTNQRQLAHEEEYAAEELLLQVEDFHERYNDTRSLVSDVLEQL
SEQDVKLSDLEEALDQALDYVIQTDDINKENTARLQRREEQHENIKEQTEEVNSILLSAT
NILAGPQKVNSQLSEIIKNVSGIYAEIDGAKKELQEKIANLSLFDDDLVEKAMQHAHNLR
RLADELDRNLYGVDTNGLVQRAINASNVYENIAGYIEEANEAALLALNSTNRVNDAAVGI
DTQIIYHKGKSEELLNRAMELHRTADDSNDLTIADTSRHVNGTFARMNALRSHLMRAITK
MQSAEPEEARERLEQAKLKTAEAVSATMTVTQATTPMDENVRLWSQNLQDFQHNSAAYDS
AVHSAGDAVKKLTEVFPELLDKLRRVEQKAPANNISSSIQRIRELIAQTRSVASKVQVSM
MFGGQSAVEVNPKINVEELKSFTSMSLYIKFQKDNPELATSPDRFILYLGNKNAKTYIGL
AIKNDNLVYIYNLGDEDVEIPLDAKPVSTWPSYFSIIKIERIGRHGKMFLTVPSLSSTAE
EKFIKKGEVPGPGSLLNLEPENAVFYVGGVPPDFKLPPSLNLPGFIGCLELATLNDDVIS
LYNFKHVYNIDTTTSPPCARNKLAFTQSRAVSYFFDGSGYALARNIERRGRFSQVTRFDI
EVRTPTDNGLILLMINGSMFFSLEMHNGFLYLRYDFGFSTGPVLLEDSMKKAQINDAKFH
EISIIYHNSKKMILVVDRRHIKSVDNERTAMPFTDIYIGGAPAEILHSSVGSHLAGSIGF
KGCMKGFQFQKKDFNLLEEPGTLGISYGCPEDSLMSRKAYFNGESFIGSSQKASLFSEFE
GGFNFRTLQPNGLLFYYSEGSDVLSISMDRGAVVLNASGTKIQSPDRNYNDGKTHFIVTS
VTPERYELTVDDKKQSKKNPAKDRAGKGPDSIKKFYFGGSPFRTQQANFTGCISNAYFTR
LDREVEVEDFQQYSEKVQTSLYGCPVESPPVALLHKKGKNSSKAKGNRNKKVGRDKDKIQ
QPSTGLKKLYQEVNMQRDPQCHLPMNPKATEHAYQYGGTANSRQEFDHIPKDFSQRAQFS
ISLKTHSSHGMIFYVSDQKETNFMALFVAHGRLVFMFNAGHQKIRIKSQEKYNDGLWHNV
IFIRGKNIGRLVIDGLRVLEEPFSGIADTWQVTEPLYIGGVAPGKAVKNIQINSVYSFSG
CLSNLQLNGRSITSASQTFSVTPCFEGPSEAGTYFSAEGGYVVLDESFSLGLKFEVVFEI
RPRSSSGILLHGHSVNGEYLNMHMRNGQVTVKLNNGIRDFSTSVTLKQSLCDGRWHRIAV
IRDANVVQLDVDSEVNHVVGPLNPKAIDHREPVFIGGVPESLLTPSLTTRNSFIGCIRNF
MIDEKPVSFSKAALVSGAVSINSCPAA
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggctttgatctccgcctggcccttcgtttctcctatattattctttttgagatgcttc
tcctccagcacagcctcgagtgagggaggcgtttttcagtttgacattgaaggtagcgca
gcggtcagcacgcaagaagccactgttatcagagggcagcagcaggcagtagctactgga
agttgggtgccttttgctgaggaatgccaagaaggattttaccgtaccagctcaggaaaa
tgctctccttgcgactgtaatggtaatgcaaacagatgccttgatggatctggaatctgt
gtggactgccagagaaacacaacaggacagcactgtgagcaatgtccggatggcttcatt
ggtgacgttgtcagaggagtccccacattctgccagccctgcccctgccccctgccagca
cttgccaactttgcagtctcctgttacagaaaaagtggaagtgtgcgctgtgtctgtaag
gaaaactatgcaggacccaactgtgaaaggtgcgcccctggttactatgggaaccctttg
ctaattggaagcacttgtaaaaaatgtgactgcagtggcaactcggacccaaatctgatt
tttgaagactgtgatgaagtgaccggccagtgtcgcaactgcctgcgcaacaccaccggg
ttcaagtgcgaacgatgcgctccgggttactacggggatgccagatttgctaaaaactgt
acagaatgtaactgtggagggagaatgtgtgacagccagacgggagaatgcctcgcagac
agtcctcaagtttctactggcacagattgcccaaccatcagctgcgacaaatgtatttgg
gatttgacagatgacatccgattagcagttctggctatcgatgaaagcaaatcgacttta
ctgagcatttctacaggtgttgcagctcaaaagcgcttgaatgacctgaacctcactacc
acccatctccaggcagcaatgtccaaaaaaaagaaccatgctgtgctttggaccatccag
gttgatgatgctgcagatgaaacgaatgatctcctgagagaagcagcaacacttgatgag
cagggaaatgaagcatccagcaaaggcctactgatacagagggaaaccatagagaccaac
aaccgtgctactcagcttgtgcaccagctcagtaatatgagggataacattcaagaaatc
agcagcaagatgaactactatgcaattcagcaagagctgagcccggaagaaattgcccag
aagctgagtgcggctgaggagacgctgaaggagatcagaagccataagcctttcactaat
cagaggcaacttgcacatgaggaagaatatgcagcagaggagttgcttctgcaagttgaa
gattttcatgagaggtacaatgacaccagatctctagtatctgatgtgctggagcagctc
agtgaacaggatgtgaagctgtcagacctggaggaggcattagaccaggcgcttgactat
gttatacaaacagatgatataaacaaggaaaacacagccagacttcaaaggcgtgaggaa
caacatgagaatataaaagagcaaactgaagaagtgaacagcattctgctaagtgccaca
aatattttggcaggaccacaaaaggtcaactctcagttaagtgagatcataaagaatgtg
tcagggatctacgcagaaatagatggagcgaaaaaagaattgcaagaaaaaatagccaat
ctgtctctgtttgatgatgatttggtagaaaaggctatgcaacatgcacacaacctaaga
agacttgctgatgagctggacaggaatttgtacggtgttgatacaaatggtttggtacaa
agggcaataaatgcttcaaatgtttatgaaaacattgctggttatattgaagaagctaat
gaagctgcattgcttgcactgaactcaacaaaccgggtcaacgatgctgcagttggaatt
gatactcagattatttaccataaaggtaaaagcgaagaacttctcaaccgagccatggag
ctacatcggacagcagatgacagtaatgatttaaccattgcagacactagccggcatgtt
aatggcacttttgctagaatgaatgctctgcgaagccacctgatgagagccatcacaaaa
atgcaatcagctgagccagaggaggccagagaacgtttagagcaagccaaactaaagact
gcagaggccgtaagtgccaccatgacagtaacacaggctacgacccccatggatgagaac
gtgaggttgtggtctcaaaacctgcaagatttccagcacaattcagcggcatacgacagt
gcagtgcattcagctggggatgcagtgaagaaacttacagaagtgttccctgaactcctg
gacaaactgcgcagagtagaacagaaggcaccagcaaacaatatttcttccagcatccag
cgaatcagagagttaattgctcagaccaggagcgtagcaagcaaggtccaagtttctatg
atgtttggaggccaatcagctgttgaagttaatccaaagatcaatgtggaggagctgaaa
tctttcacttccatgagcttgtacataaagtttcagaaagacaacccagaactggcaaca
tctccagacagatttattttgtaccttggaaacaaaaacgcaaaaacttatattggtctt
gcaattaaaaatgacaaccttgtgtacatttataatttgggagatgaagacgtggagata
cctctggatgccaagccagtcagcacctggccttcttatttcagcatcatcaaaattgag
aggattggaagacatggcaaaatgtttttaactgtgcccagtcttagcagcacagctgaa
gaaaaattcatcaaaaagggagaggttcctggtcccggctctctccttaatttggaacct
gaaaatgctgttttctatgttggtggagtgcctccagacttcaagctccctcctagttta
aacttacctggcttcatcggctgcctagaactggctaccctgaacgatgatgtgatcagc
ctatacaacttcaagcacgtctataacatcgacaccaccacatcgccaccttgtgccaga
aataagttggctttcacccagagtcgggctgtgagctatttctttgatggctctggctat
gccttggcaagaaacattgagagaaggggaagattcagccaggtgactcggtttgacata
gaagttcgaacacctacagacaatggattgatcctgctgatgattaatgggagtatgttc
ttcagtctagagatgcacaatggtttcttgtacctccgttatgactttggtttcagcact
ggtcctgtgctactagaggactccatgaagaaggctcagattaacgacgctaaatttcat
gagatttctattatatatcataattctaagaagatgatcttggtagtagacaggcgacat
ataaaaagtgtggacaatgaaagaacagcaatgccgttcacagacatctacatcggagga
gcacctgctgagatcttgcactccagcgtcggctcacatctggcaggaagtatcggcttt
aaaggctgcatgaagggtttccagttccaaaagaaggatttcaacttgctagaagaacct
ggaaccctgggaatcagctatgggtgcccagaggattcactgatgtcccgcaaagcatat
ttcaatggagagagcttcattgggtcaagccaaaaagcgtccctctttagtgaattcgaa
ggaggctttaatttccggacattgcagcccaatgggctgctgttttactattctgaagga
tcagatgtattatccatctctatggacagaggtgctgtggttttaaatgcaagtggaacc
aaaattcaatcaccagaccgaaattacaatgatggaaaaacccacttcatcgttacttct
gtcaccccagaaagatacgagctgactgttgatgacaagaagcaaagcaagaagaaccca
gcaaaggacagagcagggaaaggcccggacagcatcaagaagttttattttggtggctct
cccttcagaacacagcaagccaacttcactggctgcataagcaatgcttatttcactagg
ttggatcgagaggttgaagtggaagatttccagcagtactctgagaaagttcagacttct
ttatatggatgccctgttgaatctcctccagttgctcttctccataagaaaggaaaaaac
tcatcaaaagccaaaggaaaccgtaataaaaaggtgggaagagataaagacaagattcaa
cagccttcaactggccttaaaaaactgtatcaagaagtgaatatgcaaagagatccccag
tgccacttgcccatgaatcccaaggcaactgaacatgcgtatcagtatggaggaacagca
aacagccggcaagaatttgatcacataccaaaggatttcagtcaaagagctcagttctct
atcagtctgaaaactcactcatctcatggaatgattttctatgtctcggatcaaaaagag
accaacttcatggcccttttcgttgctcatggccgactcgtttttatgtttaatgctggt
catcagaagataaggattaaaagccaagagaaatacaatgatggcctttggcacaatgtg
atatttattagaggcaaaaatattggtcgcttggtaattgatggtctccgagtactggaa
gaacccttcagcggtattgctgatacctggcaggtcactgaaccactctatattgggggt
gtagctcctggaaaagctgtaaaaaatatccagattaactctgtctacagttttagtggt
tgtctcagcaatttacagctcaatggaagatcaatcacttcagcttcgcagacatttagt
gtcacaccttgctttgaaggcccatcagaagcaggaacatacttttcagcagaaggagga
tatgtagtccttgatgaatccttcagtttaggcctgaaatttgaagttgtttttgaaata
cgtccccgaagcagctcaggaattttactgcatggtcacagcgtgaatggagagtacttg
aatatgcacatgagaaatggacaggttactgtgaaactgaataatggaatcagggatttt
tcaacttcggtgacactgaaacagagtctctgtgatggcaggtggcaccgaattgcagtt
attagagatgctaatgtggtgcagctggatgtagactctgaagtcaaccatgtagtaggg
ccactaaatccaaaagcaatcgaccacagggagccagtgttcattggaggtgtaccagag
tctctgctaacacccagcctgactacacgcaactccttcattggctgtattcgtaacttc
atgattgatgaaaaaccagtgagttttagtaaagcagctttggttagtggcgctgtaagc
atcaatagctgtccagcagcctga
DBGET
integrated database retrieval system