Strigops habroptila (Kakapo): 115609927
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Entry
115609927 CDS
T08851
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03013
Nucleocytoplasmic transport
shab03015
mRNA surveillance pathway
shab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115609927 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
115609927 (EIF4A3)
03015 mRNA surveillance pathway
115609927 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115609927 (EIF4A3)
03041 Spliceosome [BR:
shab03041
]
115609927 (EIF4A3)
03009 Ribosome biogenesis [BR:
shab03009
]
115609927 (EIF4A3)
03012 Translation factors [BR:
shab03012
]
115609927 (EIF4A3)
Enzymes [BR:
shab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115609927 (EIF4A3)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115609927 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
115609927 (EIF4A3)
Spliceosome [BR:
shab03041
]
Complex C
Other components
EJC/TREX
115609927 (EIF4A3)
Ribosome biogenesis [BR:
shab03009
]
Eukaryotic type
90S particles
Helicases
115609927 (EIF4A3)
Translation factors [BR:
shab03012
]
Eukaryotic type
Initiation factors
eIF-4
115609927 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
115609927
NCBI-ProteinID:
XP_030346612
UniProt:
A0A672ULT8
LinkDB
All DBs
Position
6:complement(63894126..63901912)
Genome browser
AA seq
412 aa
AA seq
DB search
MSGSAGSGGTTGSARKRLMKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE
KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA
VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR
AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI
LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE
ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE
LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggtcagcggggtccggcggcacgaccggctcggcgcggaagcggctgatgaag
gaggaggacatgacgaaggtggagttcgagacgagcgaggaggtggacgtgacgcccacc
ttcgacaccatgggcctgcgggaggatctgctgcgcggcatctacgcctacggttttgag
aagccctcggccatccagcagagagccatcaagcagatcatcaagggcagagacgtgatc
gcccagtcacagtcgggaacagggaagacagcaacattctccatctctgttctgcagtgc
ctggatatacaggttcgtgagacccaggcattgatcttggcaccaactcgggagctggct
gtacagattcagaagggtcttcttgctctgggagactacatgaatgtccagtgtcacgcc
tgcatcggagggaccaacgtgggtgaagatatccgaaagctggattatgggcagcatgtt
gttgctggcactccaggccgtgtgtttgatatgattcgtcgtcgaagtttaaggactcga
gccatcaaaatgctggttttggatgaagcagacgaaatgctcaataaaggttttaaggag
cagatctatgatgtgtacagatacttgcctccagccacacaggtggttttgatcagcgcc
actttgcctcatgaaattctggagatgaccaacaaattcatgacagaccccatccgcatc
ctggtgaaacgtgatgagttgacccttgaaggaatcaagcagttttttgtggctgtggag
agggaagaatggaagttcgacaccttgtgcgatctgtacgacacgctcacaatcacccag
gctgtcatcttctgtaacactaagagaaaggtagactggctcacagagaagatgagagaa
gccaacttcacagtttcatccatgcatggggacatgccacagaaggagagagagtccatc
atgaaagagttcagatctggtgcaagccgagtccttatttcaacagatgtttgggctaga
ggcctggatgtgcctcaggtgtccctcatcattaactacgacctacccaacaacagagaa
ctctacatacacagaatcggccggtcgggcagatacggccgaaaaggtgttgccatcaac
tttgtgaagaacgacgacatccgcatcctgcgggacatcgagcagtactactccacccag
atcgatgagatgcccatgaacgttgctgatcttatctga
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