Strigops habroptila (Kakapo): 115610021
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Entry
115610021 CDS
T08851
Symbol
HMBOX1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115610021 (HMBOX1)
Transcription factors [BR:
shab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115610021 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_24
CUT
HTH_37
HTH_26
HTH_31
HTH_23
Motif
Other DBs
NCBI-GeneID:
115610021
NCBI-ProteinID:
XP_030346802
LinkDB
All DBs
Position
6:complement(61141142..61266531)
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AA seq
465 aa
AA seq
DB search
MLRTFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTRHEILHALETLDRLDQEHSDK
FGRRSSYGGGSYSNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRE
SNERLSAFNGKMSPTRYPLANSLAQRSYSFEASEEDLDIDDKVEELMRRDSSVIKEEIKA
FLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMR
PAPIPIEEPEWRQTPPPVTATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREE
IANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPG
GHSNSDDVDGNDYSEQDTWQVRNGEEEGRCSEGGREAEKVEEDRRICSKQASYTIHATRN
DDSTSHSDHQDPISLAVEMAAVNHTILALARQGANEIKTEALDDD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctcagaacttttccagtagttctgctggaaaccatgtctcactacacagacgaacca
agatttaccatagagcagatagacctgcttcagcgcctgagacgtaccggaatgaccaga
catgaaattctccacgcgctggaaaccttggatcgtcttgatcaagagcatagtgacaaa
tttggaagaaggtctagctatggaggtggttcctacagcaacagtaccaacaatgtccca
gcatcttcctctacagccacagcttcaacacagacccagcattctgggatgtccccatca
ccgagcaacagttacgatacctccccacagccttgcactactaatcagaacgggagggag
agtaacgagaggttgtctgcattcaacgggaagatgtcacctacgcgctacccacttgca
aacagcttggctcaaaggtcatacagttttgaagcttctgaagaggacttggacattgat
gacaaagtggaggaactgatgaggagggacagcagcgtgataaaggaggaaatcaaagcc
ttcctagccaatcggagaatttcccaagcagttgttgcacaggtaacaggtatcagtcag
agccggatctcccattggctgttgcagcaggggtcagacctgagtgaacagaagaaaagg
gcattttacagatggtaccagcttgagaagacaaatcctggggctacattaagcatgaga
cccgctcctatcccaatagaagagccagaatggagacagacgcctcccccagtcacagct
acctctgggaccttcagactacggcgaggcagtcggttcacatggagaaaggagtgcctg
gctgttatggaaagttacttcaatgagaatcaatatccagatgaggcaaagagagaagaa
attgcaaacgcctgtaatgcagttatacaaaagccagggaaaaagttatcggatttggaa
cgagttacctcccttaaagtgtacaattggtttgccaacagaagaaaggaaatcaagaga
agagccaatatcgaagcagcaatcctggagagccatggaatagatgtccagagtccggga
ggtcattccaacagtgacgacgttgatggcaatgactactcggagcaggacacttggcaa
gtacgcaatggggaggaggagggaagatgttcagagggaggcagagaagcagagaaggta
gaagaagacaggaggatctgctccaaacaagcaagttacaccattcacgccacacgcaat
gatgacagcactagccatagtgaccatcaagaccccatttcattagccgtggaaatggca
gcggtaaaccacaccatcttggcattggcccggcaaggagccaacgagatcaagacagaa
gctctagacgatgactga
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