Strigops habroptila (Kakapo): 115610036
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Entry
115610036 CDS
T08851
Symbol
CCDC88A
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
shab03037
]
115610036 (CCDC88A)
Cilium and associated proteins [BR:
shab03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
115610036 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
APG6_N
Motif
Other DBs
NCBI-GeneID:
115610036
NCBI-ProteinID:
XP_030346836
LinkDB
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Position
6:74278848..74365824
Genome browser
AA seq
2061 aa
AA seq
DB search
MENEIFTPLLEQFMSSPLVTWVKTFGPLAGGNGTNLEEYVALVDGVFLNEVMLQINPKSA
NQRINKKVNNDASLRIQNLSILVKQIKTYYQENLQQLIMMSLPNVLIIGKNPFSEPGTEE
IKKLLLLLLGCAVQCQKKEEFIERIQGLDFDTRAAVAAHIQEVTHNQENVFDLQWMGVIA
LTQEYVDPLLKNMALHLKRLIDERDEHSETIIELSEERDCLRFLPHASAAQSPCGSPGMK
RTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMESELKRLQQENMNLLSD
ARSARVYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETKT
MLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQKQ
SMDESLHLGWELEQINRTTELSEVPQKSLGHEVNELTSSRLLKLEMENQSLLKTVEELQS
AVGSVEGSSSRILKMEKENQRLSKKLKELENEISQEKQSLQNSQNLSKDLMKEKAQLEKT
LEALRENSERQIKLLEQENEHLNQTVASLRQRSQISAEARMKEIEKENKILHESIKETSS
KLNKIEFEKKQVRKELEHYKEKGERAEELENEVHRLEKENELLQKKITTLKITCEKIEAL
EQENSDLEMENRKLKKTLDSLKNLTFQLESLEKENSQLDEENLELRRTIESLKCTSIKVA
QLQLENKELESEKEQLKKSLELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQQ
LESELQDLESENQTLQKNLEELKISSKRLEQLEKENKLLEQETSQLEKDKKQLEKENKRL
RQQAEIKDSTLEENNVKISNLERENKSLFKEIVVYKESCVRLKELEKENKELVKRATIDK
KTLVTLREDLVNEKLKTQQMNNDLEKLAHELEKIGLNKERLLHDEQSSDDSRYKLLESKL
ESTLKKSLEIKEEKIAALEARLEESTNLNQQLRQELKTVKKNYEALKQRQEEERMVQSSP
PRSGEENQSVNKWEKENQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNS
NLQAQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSALET
ENECVLKEREDLKSLYDSLLKDHEKLEHLHERQASEYESLIAKHGNLKSAHKNLEVEHKD
LEDRYNQLLKQKVQLEELEKVLKVEQEKMLQQNEKHETVAAEYKKLRDENERLTHTYSQL
LRENEVLQTDHKNLKTLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLK
GNLEEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKI
MDQYKFYEPSPPRRRGNWITLKMRKLIKSKKDVNRERLKSVTLTPTRSESSEGFLQLPHQ
DSQDSSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKEKDKMKAFYRRSMSMNDLVQ
SMVLAGGQWTGSSEHLEGPDDISAGKRRKELGAMAFSTTAINFAAVNSSAGFRSKQLLNN
KDTTSYEDVSPQGISDDSSTGSRVHGVHAVICADALAPPVGGISTMCKVPCQICSSRPAS
LDSGRTSTSNSNNNASLHEVKAGAVNNQSRPQSHSSGEFSLLHEHEAWSSSSSSPIQYLK
GHTRSSPVLQQRTPETLDARGRHIKTGSPGSEVVTLQQFLEESNKSTSSEMKSASEENLL
DEVMRSLSESSELAGKEKLRKQPSAGCGIVRSLSVKATIDFSDGRSLKPEQLVRPSLRKS
DDPTFTSSPVKLTGGTQGKAKSVKEKLQASVSQRQSRDCNPYATLPRASSVISTAEGTTR
RTSIHDFLSKDSRQPVSVDPAPATADRSVPSASSEYSAHRLPSPFVHCVAYRVDCVPQSN
AANAVKPRNVGCHSDVPKTSRMERSNCRERTSLSSSVFNDKFSGNNDSTGSLTVAQPFLS
LNTELVSNISGLPHRPTSKPADQANLSAFRSVPKNPEQLSAPQEPDRSELVPAPCVNTSE
AESPLLVSEDNKTVWYEYGCV
NT seq
6186 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgagatattcacacccctcttggagcagttcatgtctagccctcttgtcacc
tgggttaagacatttggaccgttagctggaggaaatgggaccaacctggaggaatatgtg
gcactcgtggatggcgtgtttctgaacgaagtcatgctgcaaattaatccaaagtctgct
aatcagaggataaacaaaaaagtaaacaacgatgcatcactaaggattcaaaatctgtct
attttggtgaaacaaataaaaacttactatcaggagaatttgcagcagttgattatgatg
tctttgccaaatgtattaataattggcaagaatcctttttctgagccaggtacagaagaa
ataaaaaaactccttctgcttttacttggttgtgcagttcagtgtcagaaaaaggaagaa
tttattgaaagaatccaaggtctggattttgacactagagcagctgttgcagcccatatt
caagaggtaactcataatcaggaaaatgtgtttgatctgcagtggatgggtgtcattgca
ctgacacaagagtatgttgatcctctcttgaaaaatatggcattacatttaaaaaggctt
atagatgaaagagatgagcactcagagactatcatagaactctcagaagaacgggactgt
ctccgtttcctacctcacgcatcggcagcacaatcaccttgtgggtctcctggcatgaag
cgcactgaaagcagacagcacctctcagtagagctagcagatgccaaagcaaagataaga
aggcttaggcaagagcttgaggaaaagactgagcagttgcttgactgcaagcaagaactt
gagcagatggaatctgaactaaagagacttcagcaagagaacatgaatttactctcagat
gcccgttctgcccgagtgtatagagatgaattagatgcccttcgtgagaaggcaattcga
gtcgacaagcttgaaagtgaagtcagccgctataaagagaggctgcatgatattgagttc
tacaaagctagagtggaggagttaaaggaagacaatcaagtgttgctagaaacaaagaca
atgttggaagatcagttagaggggacccgagcccgttctgataaattacatgagttagaa
aaagagaatctacagttaaaagctaaattacacgatatggagatggagcgtgatatggac
agaaagaagattgaggaactcatggaggaaaatatgactctagaaatggctcagaaacaa
agtatggatgaatcattgcatcttggctgggaacttgaacagataaataggactactgaa
ctttctgaagtgccacagaaatcacttggtcatgaagtgaatgaactgacatcaagcaga
ttactgaagttggaaatggaaaaccaaagtttgttgaagacagtggaagaactacaaagt
gcagtgggttctgtagaaggcagtagctcaaggatcctgaaaatggaaaaagaaaaccaa
agacttagcaaaaagctcaaagagctagagaatgaaattagccaagagaaacaaagtctt
cagaacagtcaaaatctgagtaaggatttgatgaaagaaaaagcacagcttgaaaagaca
cttgaagcacttcgagagaactcagagcgacaaattaagctattagaacaagaaaatgaa
cacttgaatcaaactgtagcttctctaagacaacgctcccaaatcagtgctgaagccaga
atgaaagaaattgaaaaggaaaataaaatccttcatgagtctattaaagagaccagcagt
aagttaaataagattgaatttgaaaagaaacaagtcaggaaagaactggagcactataaa
gagaaaggggagagagcagaagaactagagaatgaggttcatcgtctggagaaggaaaac
gaactgttacagaaaaaaatcactaccttaaaaatcacttgtgagaagatcgaggcctta
gaacaagaaaactcagacctggaaatggaaaacaggaagctgaaaaagactttggatagc
ctaaaaaacctcacttttcaattagaatccttagaaaaggagaattcgcagcttgatgaa
gaaaatctagaattaagaagaacaattgaatccttgaagtgtacaagcattaaagtggca
cagttacagttagaaaataaggagctggagagtgaaaaggagcaacttaaaaaaagcctt
gagctcatgaaagcctcatttaagaagacggaacgcttggaagtcagctaccaaggcctg
gacacagaaaaccaaaggctgcagaaagcccttgaaaacagcaataagaagattcagcaa
ttagaaagtgaactgcaagacttggagtctgaaaatcagactctgcaaaagaacttggaa
gagttaaaaatctccagtaagcgcctggagcagttggaaaaggagaataagttattagag
caagagacttctcaactggaaaaggataagaaacagctagaaaaagaaaacaaaaggctt
cggcaacaagcagaaatcaaagatagtactttagaagagaacaatgtaaaaattagtaat
ctggaaagggaaaataaatctctatttaaagaaatagttgtgtataaagagtcgtgtgta
cgcctgaaagaactagaaaaagaaaacaaggaacttgtgaaaagagccaccattgataag
aaaacccttgtcactttacgagaggacttggtgaacgagaaattgaagactcaacaaatg
aacaatgatttagaaaaactggcccatgaacttgaaaaaataggcttaaacaaggagcgc
ctcttgcatgatgagcagagcagtgatgacagtaggtacaagcttttggagtcaaaatta
gaatccacacttaagaagtctcttgaaataaaagaagagaaaattgctgctttggaggca
cgtttagaagaatcaacaaatctaaaccagcagctccgtcaggaacttaaaacagtgaaa
aagaactatgaagctctcaagcaaagacaagaagaggaaaggatggttcagagttctcct
ccaagaagtggagaagaaaatcagtctgtcaataagtgggagaaggaaaatcaggaaact
actagagagttattgaaagttaaagatagattaattgaagtggaaaggaataatgccaca
ctgcaggcagagaagcaagcactcaagacacaattaaagcagcttgagacacagaacagc
aatctgcaggctcagattcttgcacttcagagacagactgtttctctacaggagcaaaat
acaactcttcaaactcagaatgccaaactgcaggttgaaaattccacccttaattctcaa
agcacatctcttatgaaccagaatgcacaactgctgatccagcagtctgctttagaaact
gagaacgaatgtgtgctcaaggagcgtgaggatctgaagtcactgtatgattcgcttctc
aaagaccatgagaaactggagcacctgcacgagcgccaagcttccgagtacgaatctctg
attgccaagcatgggaatctgaaatctgcacacaaaaacctggaggtggagcataaggac
ttagaagataggtacaaccagttgctgaaacagaaagtgcagctggaagaactggagaag
gtgctcaaggtagaacaggagaagatgctgcagcaaaatgaaaaacatgaaactgtagca
gcagagtataaaaaactccgtgatgaaaatgaaaggcttactcatacctacagtcagctc
ctgagagagaatgaagttctccaaactgatcataagaatttgaaaacactattgaacaat
tccaaactagaacaaacacgattagaagcagagttctctaaactcaaagaacaataccaa
caactggacattacatcgacaaagctaaataatcagtgtgagctgcttagccagcttaaa
ggaaatctggaggaggaaaacagacatctactagatcaaattcagacattaatgctgcag
aatagaacattacttgagcagaatatggaaagcaaggatctcttccatgtagagcaaagg
cagtacattgacaagctaaatgaattaaggagacagaaggagaaactggaggagaagata
atggatcagtataaattttatgagccatctccaccaagaagaaggggcaactggattact
ctgaaaatgaggaagctgataaagtctaagaaggatgttaaccgagagcgcctcaagtcc
gtgactcttacacccacccgctcagagtccagtgagggattcctgcagctgccccaccag
gacagtcaggatagctcctctgtgggctccaactctctggaagatgggcagaccttgggc
accaaaaagagtagcatggttgcactgaaaagactgccctttttgaggaacagaccgaag
gaaaaagacaaaatgaaggccttctaccgtcgctccatgtccatgaatgacctggtgcag
tccatggtcctagcaggaggacaatggacaggtagttctgagcatctggagggtcctgat
gatatatctgcgggtaaaaggaggaaggagttgggagctatggccttctctactacagct
atcaactttgcagctgtcaactcttctgcaggcttcagatccaagcagttgctaaataat
aaagatactacatcctatgaagatgtaagtccacaaggtattagtgatgattctagtaca
ggatcaagagttcatggagtgcacgccgttatctgtgcagatgctcttgctcctcctgtt
ggtggcatttcaactatgtgcaaggttccttgtcagatctgttcttccagaccagccagc
cttgatagtggcagaacatccactagcaatagcaataacaatgcttcactccatgaagtc
aaagcaggtgcagttaacaatcagagcaggccccagagccacagcagcggggagttcagc
ctcctgcacgagcacgaggcgtggtccagcagcagcagcagccccattcagtacctgaag
ggtcacacgaggtctagccctgtgctgcagcagcgaacacccgaaacgctggatgctcgt
ggcagacacatcaaaacgggttcccctggaagcgaggtcgtgaccctgcagcagtttctg
gaagagagcaacaagagtacctcaagtgagatgaaatcagcaagtgaagagaatctctta
gatgaagtgatgaggagcttatccgagtcctcggagctggcagggaaggagaagctgagg
aagcagccgtctgccggttgtggcatcgtgagatcactgagtgtcaaagccaccatcgac
ttctcagacggacgatcccttaagccagagcagctggtgaggcccagcctgcggaaaagc
gacgatcccaccttcactagctctccagtgaagttgacaggaggcacccaagggaaggcc
aaatctgttaaagaaaagctccaagcgagcgtttcccagcgccaatcccgcgattgcaat
ccctacgccaccttacctcgcgccagcagcgtcatctccacggcagaaggaaccacccga
aggacaagcattcatgatttcttgtctaaggacagtaggcagcctgtatcagtggatcca
gcaccagccaccgctgacaggagcgttccatcggcctctagtgagtactcagcacaccgg
ttaccctctccttttgttcactgtgtggcttacagagtagattgtgttccacagagcaat
gcagctaatgcagttaaaccccgtaatgtaggatgtcactctgatgtgcctaaaacttcc
aggatggaaaggtcaaattgtcgggagagaacttcgctgagctcaagtgtgtttaatgat
aaattctctggtaataacgacagcacagggtcgctcactgtggctcagccatttttatcc
cttaacactgaattagttagtaatataagtgggttgcctcacagacctacatccaaacca
gctgatcaggcaaatctgtcagcgtttagatcagtgccaaagaatccagagcagctttct
gctccccaggaacctgatcgtagtgaacttgttccagccccatgtgtgaacaccagtgag
gctgaatccccgctgctggtttctgaagataacaaaactgtgtggtacgagtatggctgt
gtatga
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