Strigops habroptila (Kakapo): 115610057
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Entry
115610057 CDS
T08851
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shab03400
]
115610057 (GEN1)
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
115610057 (GEN1)
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
A2L_zn_ribbon
Motif
Other DBs
NCBI-GeneID:
115610057
NCBI-ProteinID:
XP_030346920
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All DBs
Position
6:51608781..51633814
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AA seq
956 aa
AA seq
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MGVTNLWQILEPVRQPVNLTSLKGKTLAVDLSLWVCEAQAVKKMIGVVTKPHLRNLFFRI
SFLTSVGIKLVFVMEGEAPKLKADTMSKRNEMRYGPSKKVGAARTGRSLFKAILKECLEL
LECLGVPWVQAAGEAEAMCAYLNAKGYVDGCITNDGDVFLYGAQTVYRNFAMNAKDPHLD
GYTMSSIKEKLGCDRESLIGLAILLGCDYLPKGVPGVGKEQALKLIGTLRGQNLLQRFEQ
WKEEFQYDNNPPLVVKRVIHCSECHHPGSYKEHEHSGCKFCESTRYCKPNDSKYCCPCEW
HQLERVKQASAVEDSIRKKANSCEGFPFSQVIQEFLVNKNKLINIKECQRPNLLSFQVFA
SEKMEWNKHYACKKLLVLLTHYDMIQRKYGYIDSKQMQAIRIVKTRVKNRIPCFEIEWQK
PEHYVDAEDEPAELFVVTVEEESLFQAAYPDIVALYQVEKSEVTKKKQKNRKDRPKEKES
SNACDEVTNLLSQMNLKTRCGILPVQYSTLDIKTPPEDQIHQGSTESKDLVLAAASSITT
VQKPASAAVLPLTASPYSLLKSTVVDSSVLPAQFTKSSGMSSVSSVTAGLQLSSVDWEGT
FFNTSPAHGGDTHDPASDLSTRIKYSHPLAHETVRNRSEYSDAMQSDRHHLDSADDFISD
DAMGQLQKWSLTERILKKTSMPSKPLLSADVMQLEPLKCFKQTEQTLNLDEVFISSSCQL
NKVVQESKNVLSENHTRDSSVRIYQDQYKKADSLAGVVQKGHNISSSASLGLSGRTTEIL
HPGCEMLQVSQKPADVLTGCHIEKACIQTSWKTSFKKSVCQNRCSSSEDSDDENINKNQI
YEQQKRQLSHGQFKNCYTKKRSNNISGKRTNSDSALIIEGKKKPTTSKKDGNSFSLQVPP
KPSSVRDVNCFQSPEQPFERSSSGPTQQAKGAVLSYAWADSPLPLSERLKGRIQIN
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgactaatctgtggcaaatccttgagcctgtaagacaacctgttaacttgacc
agtctcaaaggaaaaacacttgctgttgatttaagtctgtgggtttgtgaagcacaggct
gttaaaaagatgattggagtagttaccaagccacatctgagaaacttattttttcggatc
tctttcttaacatcagtgggaattaaactagtgtttgtcatggaaggagaggcccccaag
ttaaaagcagacaccatgagtaagaggaacgagatgcgctatggaccttcaaagaaagtt
ggagctgcaagaacagggagatctttatttaaagccattctgaaagagtgtcttgaactg
ctggagtgtttaggtgttccttgggttcaagctgctggggaagcagaggcaatgtgtgcc
tacctaaatgcaaaaggatatgttgatggctgcattaccaatgatggagatgtcttctta
tatggagctcaaacagtttataggaactttgcaatgaatgctaaggatccacatcttgac
ggttacacaatgtcctctattaaggagaagcttggttgtgacagagagtctttgattggg
ctagctattcttctgggttgtgattatcttccaaagggtgttccaggggttgggaaggaa
caagctttaaagttaattgggactttgcgaggtcaaaacttattgcaaaggtttgagcaa
tggaaagaagaatttcagtatgataataatccacctttagttgttaaaagggtaattcac
tgttctgagtgccatcatccaggatcttacaaggaacatgagcacagtggatgtaaattc
tgtgaaagcactagatactgcaaacccaatgactccaagtactgctgcccttgtgaatgg
catcagttagagcgagtgaaacaagcaagtgcagtggaggacagtatcagaaaaaaagct
aacagttgtgagggctttccgttctctcaggttatccaagaatttcttgtaaacaagaat
aaattaatcaacataaaggaatgtcaaaggccgaatttattgtcctttcaggtatttgct
tctgagaagatggaatggaacaaacattatgcttgtaagaaactgttagtactactgaca
cattatgatatgatccagagaaaatatggatacattgattcaaaacaaatgcaggcaata
cggatagtcaagacacgtgttaaaaacagaattccttgctttgaaattgagtggcaaaaa
ccagaacattatgttgatgcagaagatgagcctgcagagctgtttgtagtcacagtagaa
gaggagtctttgtttcaggctgcttatcctgatattgttgctctttatcaagtggaaaag
tcagaagttacgaagaagaaacagaaaaacagaaaagaccgaccaaaagaaaaggaatca
tcaaacgcttgtgatgaagttaccaatcttctgtctcaaatgaatttaaaaaccagatgt
ggaattcttcctgtgcagtattccacgttggatataaaaactcccccagaagatcagata
caccagggaagtactgaatcaaaagatctagtgctagctgcagcttccagcataactact
gttcaaaagccagcatcagcagctgttcttcctctaactgcatcaccttactcgctctta
aagagtacggtggttgactcatctgtattgccagcacaatttactaaaagttcagggatg
tcatcagtttcctctgtaacagctggtctacagcttagcagtgttgattgggaaggaacc
ttcttcaacacttcaccagctcatgggggtgatacccatgacccagcaagtgacttaagt
acacgcataaaatactcgcatccactggctcatgaaacagtgagaaataggtcagaatat
tctgatgctatgcagtctgatcggcatcatctggatagcgcagatgatttcatttcagat
gatgctatgggacaacttcagaagtggtctttaactgagcgaatacttaagaagacttcc
atgccatcaaagcctttgttgtctgcagatgtaatgcaactggagcctttgaaatgtttt
aaacaaacagaacaaacattgaatcttgatgaagttttcatctcctcctcatgtcagtta
aataaagtagtgcaggaaagtaaaaatgtgctatcagaaaaccacacaagggattccagt
gtacgcatttatcaagatcagtacaaaaaggctgacagcctggctggagtggtgcaaaaa
ggccataatataagcagttcagcatctctaggcctcagtgggcgaacaacagagatactt
catcctgggtgtgaaatgcttcaagtatctcaaaagccagcagatgttttaactggctgt
cacattgaaaaagcttgtattcaaacttcttggaaaacttcttttaagaagagtgtgtgt
cagaacaggtgttcttctagtgaagacagtgatgatgagaacatcaataaaaatcagatt
tatgagcagcagaaaaggcaactgagccatggtcagtttaaaaactgttatacaaagaaa
aggagtaacaacatttctggaaaaagaacaaacagtgactcagcccttataattgaaggg
aagaagaaaccaactacttcaaaaaaagacggtaatagtttctcattgcaggtacctcca
aaaccatcctctgtaagggatgttaattgtttccaaagtccagagcaaccatttgagagg
tcaagttctggtcccacacagcaagccaaaggtgctgttctgtcttatgcatgggcagac
agtccccttcccctgtctgaaagactaaaaggaagaatccaaatcaattag
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