Strigops habroptila (Kakapo): 115610119
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Entry
115610119 CDS
T08851
Name
(RefSeq) LOW QUALITY PROTEIN: interferon-induced very large GTPase 1-like
Organism
shab
Strigops habroptila (Kakapo)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD3_GTPase
Dynamin_N
MMR_HSR1
GBP
MsrA_helical
Motif
Other DBs
NCBI-GeneID:
115610119
NCBI-ProteinID:
XP_030347044
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Position
6:62614270..62621611
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AA seq
1632 aa
AA seq
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MDSEEDILKDDEKANLAKKLLAEACEKEGLDDVYWLPKLSEILGVKSKEARKHMQYEDYL
KVECEVRYPWEKRALQKLLEVTIDKGDVEEASEEMQKKRLEITKQRQEAAKLFLKELKEM
HDNHSHSKDIIRKKEEALRQATEITKEYWAPLEKSLVGLLENIQKHQEQQELTVSKAENV
SDMEVLRRASGVLALQGIYRTSSFADVLAKQDQLIRVPDRFKLAGPEQGSLLERKVFSSS
AAEAAFTKSMEKLGFSITVSATAGLWGFNVDTDIDYSSSSQSEETHQSHSEQSCICTAKY
QYSTLASCYFQKHQLCLSDVALRELQNIKHLLSITQEADRSNMMKSRCESFFSKFGSHVN
QGPLRFGGIFWWKASTEEFGAEQREEMKQQTSESLNGYVRATYSSFSVSMGVDVDGLKYS
SQAFSKGRDRRSAHTAAQLYVTNTGGPSETNSLPQWKLGLVTSNTTXCVIDRGFQLIPVW
DIILFNHSSDFKSIYQTSSSLRAAYEALTNHSVSIMFGEELVSAVEEARAFMECVKAWEV
TADEXKLFMLINFKQNLKEKNKNHSVWINICLSDKGLQEFLVNTVLFCKKSSPENTTCIK
SLLRRLLDPYVYSAKNFPRSSFIMQWIFDSEHMLPETLSVSLLEDLAKTLLQMKECIQEV
TYAPATAASAIHEAKIKATLTTSLVVYSLHQVLQERAQKDIELLVLLITTSTGYHMQGSN
FQYLLGCPEINFMIHEVQVGHKEYLSLKEQDVYRAQAFLLLTGLKVTPKYKEVSPEQKNE
RLIFMEDQMKNLWSTEIETLLEKHSALKDXEMLENALHSRVSGCLEDTXDNLKKHNIIKD
VEDTFQRIQPSSQSKSKSDSSESEANQAITNQEFLHLLKCLGLESHYPRKMGTEDFHIIC
KKSLHDTQPSKDNELQFYFLQKLLTVDYRVRYLTCEDESNPGLAPVPKPTEQEHEPLDSF
DDFSTDLEEEAPESATRDSRVHPMDLQMAIFHCADDFMRQYISTKLAFCQFALPLLIPNP
CTSKIEFPLWSLSQIKKSWKEAEKSGKQARTNSYKTKLIYQAETPIMFFIRIGSSSSSXK
SQILNALLSKQKHHTFFHXHCKGSTKDCLLMKGVVEISWYCPRGSDDDSFDCCVAFCNLH
GDARDHEEQLQFLQEISAVNMALVAKSDQSDKKGMKILRDLRQSQRPSVCLFTEKENVNA
GXSSQNRRIGIKKRNEAELMGGLKKTIGDLVAGSNTLFNLDTCLDKARKHGFLVDEDIDA
CVTAKEKAKALVKLLKEEKLFEIKSHLLPLQGKLWYTWCKNDXLTRLQEKRDKSIEHHRS
QIELEKSAIRRQQLKQAFPLNQLMKSVLGFLQSQPADTKKYFLHWMKILMDDLSSNRLDE
LEKEYHLLWSQILAITKSNDKNNLKPQLLKNLDALSEEINNLSIGLEHILGEVGQIYEAL
ESMNKKDEYFAKLPEIAADLMVSGYPVELMDGDASYVPLRGVSAIFDRLINKLGDKRVFV
LSVLGIQSTGKSTLLNAMFGLQFNVSAGKCTRGAFMQLIKVDEKLQLYLDFSYMLVVDTE
GLRAIEMANKQSLNHDNELATFVIGIGNMTLINIFGENPVFSPSLPQGSRALEQLVPFRG
YARDQSTLGGEV
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atggattcagaggaggacatactaaaggatgatgaaaaggcaaatcttgctaaaaaacta
ctggcagaagcatgtgagaaagaaggactggatgatgtatactggctccccaaactgtca
gaaatactgggagtcaagtccaaagaagcccggaaacatatgcaatatgaagactacctt
aaggtggagtgtgaagtaaggtacccctgggaaaaaagggctctccaaaagctcctggaa
gtaacaatcgacaaaggagatgtagaagaggcttctgaggagatgcagaagaagcgcttg
gagataacaaagcagagacaagaagcagccaagctattcctgaaggagctgaaagaaatg
cacgacaaccacagccacagcaaggacattataagaaagaaagaggaggctctgcggcaa
gccactgagattaccaaagagtactgggcaccactggagaagtcattggtgggtttgctg
gagaacatccagaagcatcaggagcagcaggagttgacagtgagcaaggctgagaacgtc
tctgacatggaggtcctgaggcgggcgtcaggggtactggccctgcagggcatctacaga
accagcagctttgcggatgtgctggcaaagcaagaccagctcatcagggttcccgataga
ttcaagctggctggtccagagcaagggtctctgcttgaaaggaaggtgttctcctcctct
gcagcagaagctgctttcaccaagtccatggagaagctggggttcagcatcaccgtttct
gccacagccgggctctgggggtttaatgttgacactgatatagattacagcagctcttcg
cagtcagaggagacccaccagtcccactctgagcagagctgcatttgcaccgccaagtac
cagtacagtactctggcctcctgctacttccaaaagcatcagctttgcctttcagatgtg
gccctgcgggagctgcaaaacatcaagcatcttttgagcatcactcaggaagcagacagg
tccaacatgatgaagagcaggtgtgagagcttcttcagcaagtttgggtctcacgtaaac
cagggtcccctccgctttggggggatattctggtggaaggcatctacggaagaattcgga
gctgagcagcgggaagagatgaagcaacaaacatctgaatcactgaatggctatgtcagg
gccacctacagcagcttcagtgtcagcatgggagtggatgtggacggtctgaaatacagc
tcacaggctttttctaagggaagagacagaaggagtgctcacacagcagctcagctctac
gtgactaacacagggggcccatcagagacaaattctcttcctcagtggaaattggggctt
gtaactagtaacacaacctgatgtgttattgaccgaggctttcagctgatcccagtgtgg
gatataatcctgttcaaccacagcagtgattttaagtccatctatcaaacgagcagcagc
ctcagggctgcgtacgaagcgttaacgaatcacagtgtcagcatcatgtttggagaggaa
ctggtcagtgcagtggaagaggccagagctttcatggagtgtgtgaaggcctgggaggtg
acagcggatgagnagaaactgttcatgctgataaacttcaaacagaatctgaaggaaaaa
aacaaaaaccacagtgtctggatcaacatatgtctgtcggacaaaggactgcaggaattc
cttgtgaatactgttctgttttgcaagaagtcatctccagaaaacaccacctgtatcaag
tctctgttgaggcgcctcctggatccttatgtctattctgccaagaacttccccaggtct
tccttcattatgcaatggatctttgatagcgagcacatgcttcctgaaactctcagtgtt
tctctgcttgaagatctcgccaagacactgctgcaaatgaaggagtgcatccaggaagtc
acctatgcaccagcaaccgcagcatctgccattcatgaagcaaagataaaagccacattg
actacaagcttagttgtttattccttacaccaggttctccaggaaagggcacagaaagac
atagaactgttagtacttttaattacgaccagcacaggataccatatgcaggggagcaat
tttcagtacctccttggatgtccagaaattaacttcatgatacatgaagtgcaagtggga
cataaggagtatctgagcctgaaggaacaagatgtttacagagctcaggccttcctgctg
ctgacgggtctaaaggtaacacccaaatataaagaggtgtcccctgagcagaagaatgag
cgtttaattttcatggaagatcaaatgaaaaacttatggtccacggagatagaaactctc
ctcgaaaagcacagtgcactcaaagactgagagatgctggaaaatgccttgcattcccgc
gtcagtgggtgcttggaggacacgnntgacaatctgaagaaacacaatataatcaaagac
gtggaagacacttttcaaagaatacagccttccagtcagtccaagtccaaatcagacagc
agtgaatccgaagcaaatcaagccattacaaaccaagagttcctccatttacttaagtgc
cttggactggaaagtcactatccaaggaagatggggacagaagacttccacattatatgc
aagaaatctttacatgacacccagcccagcaaggacaatgaattacaattttacttcctg
caaaagctattaactgtggattatcgagtgaggtacctgacttgcgaggatgagagcaac
ccaggacttgcacctgtgccaaaacccacagagcaagaacatgaacccttggattccttt
gatgacttttccactgatttggaggaagaagcccctgaatctgcaaccagggacagtcgt
gtgcaccccatggacctccagatggcaatttttcattgcgctgatgatttcatgagacag
tacatttcaacaaagcttgctttctgccaatttgcactacctctcctgataccaaacccg
tgcacttcaaagatagagtttcccctctggtccctcagccagataaaaaagagctggaaa
gaggctgagaagtcaggaaagcaggccagaactaacagttacaaaaccaaactcatttat
caagcagagacacccatcatgttcttcatacggattggcagttcttcctcctctntcaag
tctcagatcctgaatgctctgctgagcaaacaaaagcatcatacttttttccactgacat
tgcaaaggcagcaccaaagactgtttgctgatgaaaggtgttgtggagatctcctggtac
tgtccccggggcagtgatgatgatagctttgactgctgtgttgctttctgtaacctgcac
ggagatgcaagggaccacgaagaacagctgcagtttctgcaggagatatcagctgtgaac
atggctcttgtagccaagtctgatcagagtgacaagaaagggatgaaaattttacgtgac
ctgcggcagtcgcaaaggccttcggtttgtcttttcactgaaaaagagaacgttaacgct
ggctgatctagccaaaacagaagaataggtatcaagaaaagaaacgaagcagaattaatg
ggcgggctgaaaaaaactattggagatcttgtggcagggtctaacacacttttcaacctt
gacacctgcctggacaaagctcgcaagcacggattcttagtcgatgaagatatagatgca
tgtgtaacagccaaagaaaaggcaaaggcactggtgaagcttctgaaggaagagaagttg
tttgagatcaaatcccatctgctgcctcttcaaggaaaactgtggtacacgtggtgcaaa
aatgacnaactcactcgcttgcaggagaagagggacaagagcatagagcatcatcggagc
caaatcgaactggagaagtcagccataagaagacagcaactaaagcaagcattccccctc
aatcagctgatgaaatcggtccttggctttctccagtcacagccagcagataccaagaaa
tacttcctgcactggatgaagatcttaatggatgatctgtcttccaatcgccttgacgaa
ctggagaaagaatatcacctgttatggtctcaaatcctggcaataacgaaaagcaatgac
aaaaacaatctgaagcctcagttgctgaagaatttagatgccctctccgaagaaatcaac
aatttgtccattggccttgaacatattttgggagaggtagggcagatttatgaagctctg
gaatcgatgaacaaaaaggatgaatattttgccaaactacctgaaattgcagctgatctg
atggtttcagggtatcctgtcgagctgatggatggtgatgcttcttacgtaccattacga
ggggtcagtgcaatctttgacagattaattaataagctaggggacaaacgagtatttgtt
ctctcggtgcttggcatccagagcacgggaaagtcaaccctgctgaatgccatgtttggt
cttcagtttaatgtcagtgcagggaaatgcacccggggagcgtttatgcagctaattaaa
gtggatgagaagctgcaactatatttggacttcagttacatgttagttgttgacacagag
ggacttcgtgccatagagatggcaaataaacagtcccttaaccatgacaatgagctggcc
acctttgtcattggcattggcaacatgactctgatcaacatcttcggagaaaatcctgtg
ttttccccatccctgccccagggaagccgggctctggaacagcttgtgcctttcaggggc
tatgccagggaccagagcactttgggtggtgaagtttag
DBGET
integrated database retrieval system
