Strigops habroptila (Kakapo): 115610220
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Entry
115610220 CDS
T08851
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115610220 (SMARCD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115610220 (SMARCD3)
03036 Chromosome and associated proteins [BR:
shab03036
]
115610220 (SMARCD3)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115610220 (SMARCD3)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115610220 (SMARCD3)
PBAF complex
115610220 (SMARCD3)
GBAF(ncBAF) complex
115610220 (SMARCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
115610220
NCBI-ProteinID:
XP_030347228
UniProt:
A0A672TSX2
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All DBs
Position
1:complement(96656218..96746176)
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AA seq
485 aa
AA seq
DB search
MATDEVTGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYVGSPSVRPGM
PQTVMETTRKRTAPQQVQQQQVQQQVQQQQQATQNRTRSAKRRKMADKILPQRIRELVPE
SQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKSDADDSDGS
IASWELRVEGKLLDDLSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGF
QVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSAIIQALWQYIKTNKLQD
SHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHIISVDPNDQKKTACY
DIDVEVEDPLKGQMSSFLLSTANQQEITALDNKIHETIESINQLKIQRDFMLSFSKDPKG
YIQDLLRSQSRDLKVMTDVVGNPEEERRAEFYHEPWSQEAVSRYFYCKIQQRRQELEQSL
GVRNT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctacagacgaagttacaggaggggctcgcaaagctacgaaaagcaaactttttgag
tttctggtccatggggtgcgacctgggatgccatcaggagctcgaatgccccatcagggg
gctcccatgggtcccccaggccccccatacgttggaagcccctcagtgcgacctgggatg
ccccagactgtgatggaaacaacaagaaaacgcactgcaccacagcaggtccagcaacag
caggtgcagcagcaagtgcaacagcagcagcaagccactcagaaccgaactaggagtgcc
aagaggaggaagatggctgacaaaattctccctcagaggatccgggagctggttcctgag
tcccaagcctacatggatctgttggcctttgaacgcaaactagaccagaccattatgcgg
aagcgtgtggatattcaggaagcgctgaagaggccaatgaagcaaaagcggaaactgaga
ctttacatctccaacacatttaatcctgcaaagtctgatgctgatgactctgatggcagc
attgcttcatgggagctgcgagtggaggggaagctcctggatgacctcagcaaacaaaaa
cggaagttttcatctttttttaagagtttggttattgagctggacaaagatctttatgga
cctgacaaccatcttgtggagtggcacagaacgcctacaacccaggaaacggatggcttc
caggtgaaaagacccggtgatgtcagtgtgcggtgcacattactcctcatgttggactac
cagcctccacagtttaaactggacccacgactagcccgtttgctggggatacacacgcag
acccggtcagccatcatccaggctctctggcagtacatcaaaacaaacaagctgcaagac
tcccatgataaagaatacattaactgtgacaagtacttccagcagatctttgactgtcca
cggctaaagttttctgaaattcctcagagactcactaacctgctgctgccaccagaccct
atagtgataaaccatataatcagtgttgacccaaatgatcagaagaagacagcttgttat
gacatagatgtagaagttgaagacccattaaagggacagatgagtagttttcttctctca
acagctaaccaacaggagattacagcattggacaacaagattcatgagacaattgaatcc
ataaatcagctaaaaatacaacgtgatttcatgctgagtttctccaaagatcccaaagga
tacatccaagaccttctccggtcccaaagtagggatcttaaggtgatgactgatgtagtt
ggaaacccagaggaagaacgcagagctgaattttatcacgagccatggtctcaagaggct
gtgagcagatatttctactgcaagatccagcagcgccggcaggaactggaacaatctctg
ggagtgcgcaacacataa
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integrated database retrieval system
