Strigops habroptila (Kakapo): 115610276
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Entry
115610276 CDS
T08851
Name
(RefSeq) sodium channel protein type 5 subunit alpha-like
KO
K04842
voltage-gated sodium channel type X alpha
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shab04040
]
115610276
Ion channels [BR:
shab04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
115610276
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
IQ
LRR_14
Motif
Other DBs
NCBI-GeneID:
115610276
NCBI-ProteinID:
XP_030347375
LinkDB
All DBs
Position
1:102823063..102875018
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AA seq
2005 aa
AA seq
DB search
MAEFLLPGTNNFRKFTSESLAAIKKRIAAKSCRRRNTIDQKPEEKPRPQLDLKAFQKLPA
LYGNPPPELIGEPLEDLDPYYKDRKIFIVLNKQKTIFRFTATRALWILSPFHPIRRTAIK
ILVHSLFTLFIMCTIITNCVFMALTESSKASPSPSWNKYVEFTFTGIYTFESLIKILARG
FCLNEFTFLRDPWNWLDFSVIVMAYVGAFSNLGSVSVLRTFRVLRALKTISVVPGLKIIV
GALIQSVKKLANVMILTVFCLSVFALIGLQLFKGNLRQKCIRNSTEFSKIPYFVNKTWES
YEMFANDTAYFAKKEGTSDILLCGPGAGICPPDYICLKIGPNPDYGFTSFDSFGWAFLSL
FRLMTQDYWERLYQQTLRAAGKVYILFFMLVIFLGSFYLVNLILAVVTMAYEEQNKATIA
ETEEKERKFLEAMELLQKEQESLAIKGIDILSISSFEASSLSPKEIKERSNRKKRNQSLG
IEDNEEQQFPKSQSTDSQRKLSFLGLVYGPNANQAKRRLSHGSVFNFQIPALEVDSRTDF
SDEENRSAGEHKIQCRSLSVTQMGRRSSVQSQMSHTSHPATPNCVHTSKWANMDDCNGVI
SVMGGGGSRVHSVDPVSSEGVMLPPVMEDPGKGNLQPAVNDESSMMHLPPHLSVEYFNEA
LQRQRAASAVSIITSVLEELEESRRRCPPCLNNFALKYLIWDCCPLWVRIKTKVAAFIKD
PFIDLTITVCIVVNTLFMALEHNNMSDNFKTMLNVGNLVFTGIFTAEMILKIIALDPYYY
FQQPWNIFDSIIVTLSLIELSLPKQKSKKERRKGGTLSILRSFRLLRVFKLAKSWPTLNT
LIKIIGNSLGALSNLTLVLAIVVFIFAIVGVQLFGRSYLDNSHKINKYGKPRWHMMDFFH
SFLVVFRILCGEWIETMWDCMVVAEPPLCLLVFLLVMVIGNLVVLNLFIALLLNSFSADC
LQTAEDDGEMNNLRIAFARFHKGFHFVKSITWDTFCGKLKHIKKAHRKKIKLTSQNTLGF
QCEEIKNCKENYNNEWVEKNGDKCLGLEDFVTNPNVFVCVPIAEAENTSEGFEDDDKLST
FTDTEYSKQDENHLRQRGERAKNSGSWSKGSGFSSEEFSVLYLGKDRKFELSSPEVKEFH
SISSSEGSTVDLTNPEDLLKQMPEFAEDFKTPENCFPEGCVRYFRCYVGSTIKFGQETWW
NLRKTCYQIVEHSWFESFIIFMILLSSGALAFEDIHINERKNIKTMLSFLDKMFTFIFFL
EMLLKWVAYGFKKYFTNAWCWLDFLIVGVSLIDVLGSSLGPMKSLRTLRALRPLRALSRF
EGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVTLFAGKFGKCVNLTEEDSELNNSI
NDITDCRTYNNTGKIFWVNVKVNFDDVGSGYLALLQVATFKGWMEIMYAAVDSREKNEQP
KMEHSLFMYLYFVIFIIFGSFFTLNLFVGVIIDNFNQQKKKISGEDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPLNRYQGFFFDIVTRQAFDVVVMILICLNMITMMVETYEQSETKTN
VLNKINILFVAIFTAECVLKLVALRQYYFSNAWNIFDLVVVIMSLIALLLSGIGKAFEHF
LPPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
ANFAYVKMEDGIDDIFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPFCDPNINGTI
GECGKPAIGIIYFVSYIIVSFLIVVNMYIAVILENFNAATEESTEPLGEDDFDIFYEIWE
KFDPEATQFITFSELSDFADALAEPLRVPKPNKIELIAMDLPMVSGDRIHCLDILFAFTK
RVLGDSGELDTLKVQMEEKFMSANPSKKSYEPISTTLRHRQEEASATVIQRAYRSHLLLR
SVKQASYPYHHRTCSIDTLGDAAPEKEGLIASMMGENYGRSPDKSETLSSASFPPSYDSV
TRANSGNLVVENGEITGNQQSPDIK
NT seq
6018 nt
NT seq
+upstream
nt +downstream
nt
atggccgagttcttactacctggtaccaacaacttccgtaagttcacttctgaatccttg
gctgccatcaaaaagagaattgctgccaagagttgtcgccgaagaaatactatagaccag
aaacctgaggagaaaccacgtcctcaacttgacctaaaagctttccagaagttaccagct
ctctatggaaacccccctccagagctcattggggagccactggaggatcttgacccatac
tacaaagatcgtaagatcttcatagtgctaaacaagcagaaaacaatcttcagatttact
gctacacgtgccttatggatcctcagtcctttccatccaattcgaagaacagcaattaaa
attttagtacattcactcttcactttgtttatcatgtgcactattataactaattgtgta
ttcatggctctgactgagtcctctaaggcttctccatctccttcatggaacaagtatgtt
gaatttactttcactggcatttacacttttgaatcattgataaaaatattggcaagagga
ttctgtctaaatgaattcactttccttcgagatccctggaactggttggatttcagtgtt
atcgttatggcgtatgtgggagcatttagtaacttggggagcgtgtcagtccttcggact
ttcagggttctgagagctttaaaaaccatttcagtagtcccaggactcaagatcattgta
ggggcacttatccagtctgttaagaaacttgccaatgtgatgatcctgactgttttctgc
ctgagtgtctttgctctcattggtctccagctttttaagggcaatctaagacaaaagtgt
atcaggaactctacagagttcagtaaaataccttatttcgttaacaaaacatgggaatcc
tacgaaatgtttgctaatgatacagcatactttgctaagaaagagggcacctcagatatt
ttgctatgtggccctggtgctgggatctgtcctccagactatatatgcttgaaaattggg
ccaaatcctgattatggtttcactagttttgattcatttggctgggcttttctttcctta
ttccgcctgatgacccaggactactgggagcgtctgtaccagcagaccctcagagctgct
gggaaggtgtatatactcttcttcatgctggtcatatttctgggctcattttatctagtc
aatttgattctggctgtagtaacaatggcatatgaagagcagaacaaggccaccattgct
gaaacagaggaaaaggaaaggaaatttcttgaagccatggaattattacagaaagagcag
gagtcattggctattaaaggaattgatatcctgtcaattagctccttcgaagcctcatct
ctgtctcccaaagaaatcaaagaaagaagcaataggaaaaagagaaatcagtccttgggg
atagaagataatgaagaacaacaattccccaagtcacagtccacagatagtcagcgcaag
ttgtctttccttggcctggtgtacggtcccaatgcaaaccaggcgaagcgcaggcttagc
catgggagcgtgttcaatttccaaatacctgctttagaagttgattccagaacggatttc
agtgacgaggaaaaccgcagtgccggggaacacaaaatccagtgtcggtcgctgtcggtc
acacagatgggaagacgctccagtgtgcaaagtcaaatgagccacacctctcaccctgct
accccaaactgcgtgcacaccagcaagtgggctaacatggatgattgcaatggtgtgatt
tcagtgatgggaggaggaggcagcagggtgcacagcgtagatccagtgtcttctgaagga
gtaatgcttccaccagtaatggaagacccaggaaaggggaatctgcagccagctgtaaat
gatgagagcagcatgatgcatttgcctcctcatctgtcagtggagtactttaacgaggca
cttcagagacaaagggcagcaagtgcagttagcataattaccagtgtcttggaggaactt
gaagaatctcggcggagatgcccaccctgcctgaataattttgctttaaagtatctaatt
tgggactgttgcccactttgggtgagaatcaagacaaaagtggctgctttcataaaggat
ccctttattgatctcaccatcactgtttgcattgtggtgaacactttgttcatggcgctg
gagcacaataatatgtcagataattttaaaacaatgcttaatgtaggcaacttggttttt
acaggaatcttcactgcagaaatgattttaaaaatcattgctttagatccctattactac
tttcagcagccatggaacatttttgacagtataattgtcacattgagtttaattgaactg
agtttacccaaacaaaaaagcaagaaagaaaggcgaaaaggaggaaccctgtcaatttta
agatcctttagactgctgagggtcttcaaactggcaaagtcctggccaaccttaaacact
ctaattaaaataattggtaactccctgggagcactgagtaatctgaccctcgtcctggca
atcgtcgttttcatttttgctatagtaggggtgcaactttttgggagaagctatctggac
aacagccataaaataaacaaatatggcaagccacgctggcacatgatggactttttccac
tcgttcctcgtcgttttccgaattctgtgtggagaatggattgagaccatgtgggactgc
atggtggttgctgaaccaccactgtgccttcttgtctttctactggtcatggtgatagga
aatttagtggtgctcaaccttttcattgcactactgctgaattccttcagtgctgactgt
ctccagacagcagaggatgatggagagatgaacaaccttcgcattgcctttgctcggttt
cacaagggatttcactttgtaaagagcattacatgggataccttttgtggaaagctcaag
catataaagaaagcgcataggaagaaaataaaactgacttcacagaacacacttgggttc
cagtgtgaagaaataaaaaattgtaaagaaaattacaataatgaatgggttgagaaaaat
ggggacaaatgcttaggtcttgaagattttgttaccaatcccaatgtatttgtttgtgtc
cctattgctgaggcagagaatacaagcgagggttttgaagatgatgataagctgagcacg
tttacagacacagaatacagcaaacaggatgaaaatcacctgaggcaaaggggagaaaga
gctaaaaattcaggcagctggagtaaaggatcaggattttcctctgaagaattcagtgtg
ctttacctgggaaaggatagaaagtttgaactgtcatcgccagaagtaaaagagtttcac
agtatcagctcttctgaaggaagcacagtagatttgacaaatcctgaagatcttttaaaa
cagatgccagagtttgctgaagactttaagactccagaaaactgttttccagaaggttgt
gttcgatactttcgttgttatgtgggtagtaccataaagtttggacaagaaacgtggtgg
aatctgagaaaaacctgctaccagattgttgaacattcttggtttgaatcttttatcata
ttcatgattcttttgagcagtggagccctggcatttgaagacatacatataaatgagaga
aaaaacattaaaactatgttatcgtttcttgacaaaatgttcactttcatcttttttctg
gagatgctcctgaaatgggtggcttatggattcaagaagtatttcactaatgcctggtgc
tggctggacttccttattgtaggagtatctttaatagacgtcttaggcagctcgttaggg
cccatgaaatctcttaggactctccgagctctgagacccttaagagcattgtctcgattt
gagggaatgagggtggttgtcaatgccctcttgggagccatcccttcaatcatgaatgtt
ctgcttgtctgcctcatcttctggctcatctttagcatcatgggagtgaccctctttgct
gggaagtttgggaaatgtgtcaatctgacagaagaagattcagaattaaataattcaatc
aatgacataacagactgtagaacgtataataacacaggaaaaatattctgggtcaatgtt
aaagtcaactttgatgatgttggctctggctacctggctcttcttcaggtggcaacattt
aaaggttggatggaaatcatgtatgctgcagtagattcgcgagagaaaaatgaacagccg
aaaatggagcacagtctgtttatgtatctctactttgtgatctttatcatctttggatct
ttctttaccctgaatctctttgttggtgttattattgacaacttcaaccaacaaaaaaaa
aagataagtggggaagatatctttatgacagaagaacagaaaaaatattacaatgcaatg
aaaaagctgggatccaagaaacctcaaaaacccattccaagaccactgaacaggtaccaa
ggtttcttttttgacattgtgacacgtcaagcttttgatgttgtcgtcatgattcttatc
tgccttaacatgatcaccatgatggtggagacctatgagcaaagtgaaacaaagactaat
gtccttaacaaaatcaatatactcttcgttgccatctttactgcagaatgtgtactgaaa
ttggtggctctgaggcagtactatttctcaaatgcctggaacatatttgatttagttgtt
gtgatcatgtcactcattgccttactgctttctggcattggtaaagcatttgaacatttc
ttaccacctacactcttcagggtcattcgcttggctcggattggacgaatactgagactc
atccgggctgccaaaggaattcgaactctgctttttgcattaatgatgtctctacctgct
ctgttcaacattggcctcttgctttttctggtcatgtttatttatgccatttttggcatg
gctaactttgcctatgtgaagatggaagatggcattgacgatatattcaacttccaaact
tttgctaacagcatgctctgtctcttccaaatcaccacatcagctggctgggatggtctt
ctcagtccaattttaaacactgggccaccgttctgtgatccaaacataaatggtactata
ggcgaatgtggtaaacctgccataggtattatttattttgtaagttacatcattgtgtca
tttcttattgttgtaaacatgtatatagctgttattctggagaatttcaatgctgctaca
gaggaaagtacagagcctttgggggaagatgactttgacatcttttatgaaatctgggag
aagtttgatcctgaggcaactcagtttataactttctctgaactttcagactttgcagat
gctctggctgaacctttacgggtaccgaaaccaaacaaaattgaactcatagcaatggat
ctgcctatggtcagtggagacaggatccactgcttggacatcttgtttgcttttactaaa
cgagtgttaggagattctggggagctggatactttaaaagtacaaatggaggagaagttc
atgtctgccaatccatcaaaaaaatcctacgagccaatctctaccacactcagacatagg
caagaggaagcatctgccactgtcattcagcgtgcctacaggagtcatttgcttctgcgc
tctgtaaagcaggcttcttacccataccatcacagaacatgcagtattgacactcttgga
gatgctgctccagaaaaagaaggacttattgcatctatgatgggtgaaaactatggtagg
agtcctgacaagtctgaaactttgtcctcagcatcctttcctccatcatacgacagtgtc
acaagagccaatagcggcaatctcgtggttgagaatggagaaattacaggtaatcaacaa
tctccagacattaagtag
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