Strigops habroptila (Kakapo): 115610287
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Entry
115610287 CDS
T08851
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115610287 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
shab04990
]
115610287 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
shab04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
115610287 (PDLIM5)
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GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
115610287
NCBI-ProteinID:
XP_030347390
UniProt:
A0A672U1B1
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Position
7:49715809..49839922
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AA seq
597 aa
AA seq
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MSNYSVSLVGPAPWGFRLQGGKDFNVPLSISRLNDGGKAARAHVGIGDVVLTIDGISTDG
MTHLEAQNKIKACTGNLNMTLQRVSSVQKPDIVQVPKGEPTEVVKPVPIASAVAPKVTAT
VSVAYNKTPRPFGAVTSSKVTSIPSPSSAFTPAQAAAAPAPFAVPGLHVNAKPNAEQRSP
VLSAAKPAVNVPRQPAAHNAGLSASAGDGTQDVAEGSRRGFRENQGESKQQNGKTPPKRP
PRKHIVDTYTEFYHTPTHSDASKKRLIEDTEDWHPRTGTTQSRSFRILAQITGTDHMKEP
EHEASKKTNDSLEAAQPAAFTASSPRNVPAHQENVDTRPAPASTVSAAGLKPTGPPGAAK
YSGWQPANQAAPASGWTSNSVKPPGTAAPSEKSVTAPQLNEQDTLVQRAEHIPAGKRTPM
CAHCNQVIRGPFLVALGKSWHPEEFNCAHCKTSMAYIGFVEEKGMLYCEVCYEKFFAPEC
SKCQRKILGEVINALKQTWHVSCFVCVACHNPIRNNVFHLEDGDPYCETDYYALFGTMCH
GCEFPIEAGDRFLEALGHTWHDTCFVCSVCNDSLEGQTFFSKKDKPLCKKHAHSINI
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagcgtgtctttggtcggcccagctccttggggtttcaggcttcaaggg
ggaaaggatttcaacgtgcctctgtctatctctcgacttaatgatggtggcaaggcagcc
cgagcacacgtggggataggtgatgtggttctcaccattgatgggataagcacggacggg
atgactcatctagaagcgcaaaacaagatcaaggcatgtacaggcaatttgaacatgact
ctgcaaagagtgtcatctgtacaaaaacccgatattgttcaggtacccaagggagaacct
acagaagtagttaagcctgtgcccattgcctctgctgttgcacccaaagtcactgccacg
gtgagcgtggcttacaataagacaccaaggccatttggagctgtaacctcttccaaagtc
acttccatcccatcaccatcctccgccttcaccccggcccaggcggctgctgccccagcc
ccgttcgctgtgcccggactgcatgttaacgccaagcctaatgctgagcagcggtcaccg
gtgctgagcgctgctaaacctgcagttaatgtcccacggcagcccgccgcgcacaatgcc
ggcctgagcgcctctgccggcgacggcacccaggatgtagccgaggggtcacgacgagga
ttcagagaaaaccagggggagagtaaacagcaaaatgggaaaaccccacccaaacgcccc
ccgcggaagcacattgtggatacctacacagagttttaccacacacccacccacagcgat
gccagcaagaagcgactgattgaagacaccgaagactggcatccccggacaggcaccact
cagtcccgttctttccgcatccttgcccaaatcactggcactgatcatatgaaggaaccg
gaacatgaagcttcaaagaagactaatgattccctggaggcagcccagcctgctgctttt
acagcctcctcgccaaggaacgtgcctgcccaccaagaaaacgtggacacgagacctgct
cctgccagcactgtatctgctgccggcctcaagccaacaggacccccaggtgctgccaag
tactcgggctggcagcctgcaaaccaagcagctcctgccagtggatggacatcaaacagt
gttaaaccgcctggaacagctgccccaagtgaaaaatctgtgacagcacctcagctaaat
gagcaagacacgttggttcagagggcagagcatattccagcaggaaagcgtactcctatg
tgtgcgcactgtaatcaagtcattagaggacccttcttggtggctttggggaagtcatgg
catccggaggagtttaattgtgctcattgcaaaacctccatggcttacattggattcgtg
gaagagaaagggatgctttattgtgaggtctgctatgagaagttcttcgcccctgagtgt
tcaaagtgccagaggaagattcttggggaagtaataaatgctttgaaacaaacttggcac
gtttcctgctttgtgtgtgtggcctgtcataaccccatccgcaataatgtcttccactta
gaagatggtgatccctactgtgagacggattactatgccctcttcggtactatgtgccat
ggctgtgaattccccattgaagctggagacaggtttcttgaagctctgggccacacttgg
catgacacttgctttgtatgctcagtatgtaatgacagtttggagggtcagactttcttc
tccaagaaggacaagccgctgtgcaagaaacacgctcactctatcaacatctga
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