Strigops habroptila (Kakapo): 115610293
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Entry
115610293 CDS
T08851
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115610293 (LRBA)
Membrane trafficking [BR:
shab04131
]
Endosome - Lysosome transport
Others
Others
115610293 (LRBA)
Endosome - Golgi transport
115610293 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
115610293 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_EML
WDR55
SUKH_6
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
115610293
NCBI-ProteinID:
XP_030347407
UniProt:
A0A672UYS5
LinkDB
All DBs
Position
7:61297037..61692244
Genome browser
AA seq
2864 aa
AA seq
DB search
MASEDKQVIQPTGDDGGGGGGSGGGAGKEGNAAEGASVLQPLNPGVPIRGIKMKFVVLTG
LVEVGEVSNRDLVDTVFNLLVGGQFDLEMNFIIQEREAITCMVDLLDKCDITCQAEVWSM
FTAILKKSIRNLQACTEVGLVEQVLKRIDRADNMIADLLVDMLGVLASYNLTVRELKLFF
SKLQGQKGRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTF
HTWLRMDPVNNINVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKFD
FKPQKWYMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADA
NRVFCGQMTSVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLDEHHKLLLYDGKL
SSAIAFMYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSALHSIGGV
QVLFPLFAQLDYRQYSSDHIDTTVCSTLLTFIMELLKNSIAMQEQMLSCKGFLVIGHSLE
KSSKTHVTRAVLDLCLAFSKYLSNLHNGVPLLKQLCDHVLLNPAIWIHIPAQVQLILYTY
LSTEFIGTVNIYGAIRRVGTVLLVMHTLKYYYWVVNPQDRSGITPKGIDGPRPTQKEILS
LRAFLLMFIKQLVMKDYGIKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPSSMIP
AFDQRNGLQVVYKLLASQSEGIRVQALKVMGYFLKHLAPKRKAEVMLGHGLFSLLAERLM
LQTSLITMTTYNVLFEILTEQICTQVIHKQHPDPDSTVKIQNPQILKVIAILLRNSPQCP
ETLEVRRAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCCFNPKTSEEQNITEMVYTI
FRILLYHAIKYEWGGWRVWVDTLSITHSKVTFEMHKESLSQMYREYQGKGGEGDGIPSST
PIRTISGASKEAETKGKQQCLELKGDAAAPSCIINDDTNCSTGKKETNTSSNGEQQTHLV
SNHREELEGEDRETTQDLKAVPCAEFSPEPEAIRPSVSEISTGIAEAIEDSLSKADELVE
ETVAVTAAPLSMQTTSEGETPESPERLEKSAVEVEDEDDFVDLKEESSMPLPSEEFAEMN
KECSSNESEVTKQEIAIEKQPESVLVKSEDTEVVDGTKQELTSSSETVSSAVQEVMTQPA
SQEKKKLGEEKILFSETKTAEENANTHVPEPAGASDKRIAKLDVSSVASDTERLELKANT
CLEAPHPPRSMPETSRHQDSSGQELAAMSDGQRRDSRSTVFRIPEFKWSPMHQRLLTDLL
FSIETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLISQVMDNMIMACGGILPLLSAAT
SATHELENIEPTQGLSVEASLTFLQRLINLVDVLIFASSLGFTEIESEKNMSSGGVLRQC
LRLVCAVAVRNCLECQQHAQMKPIGDIVKKQKTVQGLVGTANSSAKSPVDIVTGGISPIR
DYDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNERRPN
HSQSFKESGNENNETPATDVENPSAALSTSACTEDSESTASVQRRDSGLGEEPASGQTNS
SSSVAEAGPLNVSAGPDAVSEVLCTLSLEVNKSQEGRSETGTEDSKPTVSAPAAKNVNVK
DILRSLVSTPADGTALDAALLPPAFLGVLGDGAAEQPVQFHSFDRSVVVPLKKSTISSST
AAMSIPTNAVSVVSSLDSAQAPDLSGESPGKGSSNSKLPSVPTVSSVPEDSASNMSITDR
LEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCS
QEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDINRHAEFES
LCAQYSADKREEEKMCHHLIMAAKYRDQVTATQLIQKIINILTDKHGAWGSSAPSRPREF
WRLDYWEDDLRRRRRFVRNPLGSTHPEATLKAAGEHAPDEDILVKGKQSIKSQVLGNQNS
ESEVLLEGDDDIMSFMEEREVENLTGPVALSTPAQLVAPSVVVKGTLSITLSELYFEVDE
EDPSFKKIDPKILAYTEGLHGKWLFSEIRSIFSRRYLLQNTALEIFMANRVGVMFNFPDQ
ATVKKVVNCLPRVGIGTIFGLPQTRRISLASPRQIFKASNMTQRWQHREISNFEYLMFLN
TIAGRTYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGALNPKRAAFFAERYES
WEDEQVPKFHYGTHYSTASFALTWLLRIEPFTTLFLNLQGGKFDHADRTFSSVSRAWRNS
QRDTSDIKELIPEFYYLPEIFVNSNNYNLGVMDDGTVVSDVELPPWAKTPEEFVRINRLA
LESEFVSCQLHQWIDLIFGYKQQGPEAVRSLNVFYYLTYEGAVNLSSITDSVLREAVEAQ
IRSFGQTPSQLLIEPHPPRSSAMQVYLLLQSPLMFTDQAQQDVIMVLKFPSNSPVTHVAA
NTQPGLATPAVITVTANRLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIASNTGMHRRQ
ITDLLDQSIQVHSQCFVITSDNRYILVCGFWDKSFRVYSTDSGKLMQVIFGHWDVVTCLA
RSESYIGGNCYILSGSRDATLLLWYWNGKTNIIGDNPRGDFATPRAILTGHDYEITCATI
CAELGLVISGSKEGPCLIHSMNGDLLRTLEGPGTLEGPENCLKPKLIQASREGHCVIYYE
NGLFCVFGVNGRLQAAMETDDKIRAIQLSRDGQYLLTGGDNGVVMVWQMWDLKQLFAYPG
CDAGIRSMALSYDQRCIMTGMASGSIVVFYNDFNRWHHEYQTRY
NT seq
8595 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgaagacaaacaagttattcagccaacaggtgatgatggaggaggaggaggt
ggtagtggaggaggagcggggaaagaaggaaatgctgctgaaggggcaagcgtgctgcag
cctttgaatccaggagtccccatccgaggtatcaagatgaaatttgtggtgctgacagga
ctggtggaagttggcgaagtgtccaacagagacttggtcgatactgtgtttaatctgctt
gttgggggccagtttgacttggaaatgaacttcatcatccaagaaagagaggccatcacc
tgcatggtagatttgctggacaagtgtgacatcacctgccaggctgaggtgtggagcatg
ttcacagcaatcttgaagaaaagtatacgcaatctacaagcatgcacagaagtggggctt
gttgaacaagtgctcaagaggattgatagagccgacaacatgattgcagatctcttagtg
gacatgctgggtgtgttggctagctataacttgacagttcgagagctaaagttattcttc
agcaagcttcaaggacaaaaagggagatggccaccacatgctgggaaattactgtctgtg
ttaaaacacatgcctcagaagtatggacctgatgccttcttcaactttccaggaaaaagt
gctgcagctattgccttacctcctatagccaagtggccgtatcagaatggttttactttc
cacacttggctaagaatggatcctgtaaataatatcaatgtggataaggataagccttac
ttatattgttttcgaacaaacaaaggacttggttattctgctcactttgttggaggctgc
ttgattgtaacgtccataaaatcaaagggaaaaggtttccagcactgtgtaaaatttgat
ttcaagccacaaaagtggtatatggttaccatagtgcacatctataaccgctggaagaac
agtgaacttcgatgttatgtgaatggggagctggcgtcttacggagaaataacatggttt
gtcaacaccagtgatacatttgacaaatgtttcctgggttcttcagaaacagcagatgcc
aatcgagtgttttgtgggcaaatgacatctgtttacctctttagtgaggctctcaatgct
gctcagatctttgccatttatcagcttggtctgggatataagggaacattcaaattcaag
gcagaaagtgatctcttccttgatgaacatcacaaattgttgctgtatgatggcaaacta
tccagtgctattgcttttatgtacaatccaagggctacagatgcacaactgtgtctagag
tcatcccctaaggataacccgtctatttttgttcattcaccacatgccctcatgctgcag
gatgtgaaagcagtcttaacgcattctatccaaagtgccctgcactccattggaggagtg
caagtacttttccctctctttgcacagttagactataggcaatattcatcagaccacatt
gacacaactgtttgttctactttattgactttcatcatggagttgttgaagaactccatt
gctatgcaagaacagatgctttcctgtaagggcttccttgtgataggacatagcctagaa
aagtcttccaaaacccatgttacccgagctgtactagatctttgccttgccttttcaaaa
tacctgagcaacttacacaatggggtgcccttgctgaagcagctgtgtgatcatgttctt
cttaatcctgcaatatggattcatattccagcacaggttcagctgatcctgtacacttac
ctgtctactgagttcattggcactgttaacatatatggtgcaatccgacgagttgggaca
gttcttctggtcatgcataccctcaagtattattactgggtagtgaatccccaggatcgc
agtggtataactcccaaaggcatagatgggccacggcctactcaaaaagagattttatct
ctgcgagcattcttgttgatgttcattaaacagctagtgatgaaggactatggaataaaa
gaagatgaattgcaggctatcctcaattatctgctcactatacatgaggatgacaatcta
atggatgtcttgcagttgcttgttgctctgatgtcagagcatcccagttctatgatccct
gcttttgatcagaggaatggattacaggttgtctacaagcttttagcgtcacaaagtgaa
ggcatcagggtgcaagctctaaaagtgatgggatatttcttaaagcatctcgctccaaag
agaaaagctgaagtcatgcttggacatggattgttctctttgttggctgaaaggctgatg
cttcagacaagcttaatcaccatgaccacatacaatgtcctatttgagattctgactgaa
cagatttgtactcaagtgatacataaacaacatcctgacccagattcaacagtgaagata
caaaatcctcagattttgaaggttattgcaatcctgctacgtaattctccgcagtgtcca
gaaactctggaggttcggcgagcctttttgtcagatatgattaaactttttaataacagc
agagaaaataggaggagtttgttgcagtgctccgtctggcaggaatggatgctttccctt
tgctgttttaatccaaagacttccgaggaacagaacataactgagatggtgtataccata
tttcgaattttgctctaccatgcaatcaagtatgagtggggtggctggcgtgtttgggtg
gatacgctgtcgatcacacattcaaaggtaacttttgaaatgcacaaagagagtctttct
caaatgtatagggagtaccaagggaaaggaggtgaaggggatggaataccttcttcaact
ccaattagaacaatctctggagcaagcaaagaagctgaaaccaagggaaagcaacagtgt
ttggagttaaaaggagatgctgctgctccttcctgcattattaacgatgatacgaattgc
agtactgggaaaaaagagacaaatacctcatcaaatggtgaacagcaaactcatttggtg
tctaatcacagagaagagttggagggggaagacagggagactacacaggatttaaaagca
gtgccttgtgcggaattttctccggaaccagaagcaataagacccagtgtttcagaaatt
agtactggaatagctgaagcaattgaagattctctgagcaaagctgacgagcttgtggaa
gaaacagtagctgtcactgctgctcctttatcaatgcaaactacttcagaaggagaaact
cctgaaagtccagaaagactggaaaaatcagcagtagaggtggaagacgaggatgacttt
gttgatttgaaagaggaaagtagtatgcctttaccttcagaagagtttgcagaaatgaac
aaggaatgtagctctaatgaaagtgaagtgacaaagcaggaaatagcaatagaaaagcaa
cctgaatctgtgcttgtaaaatctgaagatacagaagttgtggatgggacaaaacaagaa
ctgacttcgtcgtcggaaacagtgagttctgcagttcaagaagtaatgactcaaccggca
tcacaagagaaaaagaagctgggggaagaaaagattctttttagtgaaaccaaaacagct
gaagaaaatgcaaatacacatgtgccagagcctgctggagcctctgacaaaagaatcgcc
aagcttgatgtttctagtgttgcatcagatacagaaagactggaactgaaagctaacaca
tgtctagaagcacctcatcccccaagatccatgcctgagacctcaaggcatcaagattcg
tcaggacaagagctagctgctatgtcagatgggcagaggagagactccaggtcaactgtg
ttccgtattcctgaatttaagtggtcaccgatgcaccagcgcttgctcacagacttactc
ttttccatagaaacagatatacagatgtggagaagccattctacaaaaactgtgatggac
tttgtgaatagcagtgacaatgtcatatttgtgcacaacacaattcacctcatctctcaa
gtgatggacaacatgatcatggcttgtggtggtatattgccattgctctctgctgccaca
tctgctactcatgaattggagaatattgagccaactcagggactttctgtagaagcatct
ttaacatttctccagagattaatcaaccttgtggatgtgctaatttttgcaagctctctt
ggtttcactgaaattgagtctgagaaaaatatgtcatctggaggagttctgcgccaatgt
cttcgtctggtatgtgcagtagcagtaagaaattgcttagaatgtcagcaacatgcacag
atgaagcctattggagacattgtgaagaaacaaaaaacagtgcagggcttggtaggaaca
gcaaattcttcagcaaagagtccagtggacattgtgactgggggcatttctccaatacga
gactatgacagacttctgcaggatatggatattaatcgacttcgagcagtagtattcaga
gacatagaggatagtaaacaggctcagtttttggctttggctgttgtatattttatttct
gtgctcatggtttcaaaatacagagatatactggaaccccagaatgaaagacgaccaaac
catagccagtcattcaaggaatcagggaatgaaaataacgaaactcctgctacagatgtg
gaaaacccatctgctgctctcagtacttcagcttgcactgaagattcagaaagtacagca
tctgtacaaagaagggattctggtcttggggaggaaccagcttcaggacaaacaaacagt
tccagtagtgttgctgaagcaggacctctgaatgtcagtgcaggtccagatgcagtcagt
gaagtactatgcacgctctcattagaagtaaataagtctcaggagggcagaagtgagact
ggaactgaggatagtaagcctacagtttctgcaccagctgcaaaaaatgtcaatgtaaag
gatatcttgagaagcttggtaagcacaccagctgatgggactgcactggatgctgctctt
ctgccaccagccttccttggagttcttggcgatggagctgctgagcagcctgtacagttc
cattcctttgataggagcgttgtagtaccactgaagaaatcaaccatttcctcatctaca
gcagctatgagtattcctacaaatgctgtcagtgtggtttcttctttagattcagcccaa
gccccggatttgtcaggagaatctcctggaaagggatcatctaattcaaaattaccatct
gtccctacggtttcttcagtgcctgaggattctgcttcaaatatgagtattacagacagg
cttgaacatgctttggaaaaagctgccccacttctgagagagatttttgtggattttgct
ccctttctttctcggactcttttgggcagccatgggcaggagttgctgatagaaggtaca
agtcttgtgtgcatgaaatctagcagttcagttgtggagctggtgatgcttctttgctct
caggagtggcagaactctatacaaaagaatgctggccttgcctttattgaacttgtcaat
gaaggaaggttgctgagtcaaaccatgaaggaccatttggtaagagtggctaatgaagca
gaatttatcttgagcagacaaagagcagaggatattaaccgtcatgctgaatttgagtca
ctgtgtgcccagtattctgcagacaagcgtgaagaagaaaaaatgtgtcatcatttgata
atggcagcgaagtaccgagaccaggtgactgcaactcaactaatacagaaaattatcaac
attcttacagacaagcatggagcctggggaagctctgcaccaagtcgtcctcgtgagttc
tggcgccttgactactgggaagatgacttgcggcgccggcgacgatttgtgcgtaacccc
cttggatcgacacatcctgaagcgacactaaaagcagccggagaacatgctcctgatgag
gatatacttgttaaaggaaagcaatccatcaagagtcaagttttaggaaatcagaactca
gagagtgaggtcctcctggaaggtgacgacgatatcatgtcattcatggaggaaagagaa
gttgagaacttaacgggtccagttgccctaagcacaccagcccagcttgtggccccctct
gtagtagtgaaaggcactctttccatcactctttcggagctctactttgaggtggatgaa
gaagatcccagttttaagaaaatcgacccaaagatactggcatatacagaaggactccat
ggaaaatggctcttttcagagattcgatctatcttttcccgacgttatcttttgcaaaat
acagcactagagatattcatggcaaatagagtgggtgtcatgttcaactttcctgaccaa
gcaacagtaaagaaagtggttaactgtctacctcgggtcggtattgggactatctttgga
ctacctcagaccaggcgcatctctttggctagtccaagacagattttcaaagcttccaat
atgacccagcgatggcaacaccgagaaatatccaatttcgaatacctgatgtttctaaac
actatagcaggtcgaacttacaatgatttaaatcagtaccctgtcttcccttgggttatc
accaactatgaatcagaggagttggaccttacacttcctagcaacttcagggatttgtca
aagcctattggagctttgaacccaaagagagcagcgttctttgctgagagatatgagtca
tgggaagatgaacaggttccaaaatttcactatggcacacattattcaacagcaagtttt
gcactcacgtggttattaagaattgaaccctttacaacacttttcctaaatctacaaggt
gggaagtttgatcatgcagatagaactttttcatctgtttcaagagcatggcgcaatagt
cagcgtgacacttctgatatcaaggaattgattcctgaattctattacctcccagagata
tttgtcaacagcaacaattacaatctgggagtgatggatgacggaacagttgtgtctgat
gttgaacttccaccgtgggccaaaaccccagaagaatttgttcgcataaacagactggca
ttagaaagtgagtttgtttcctgccagcttcaccagtggattgatctgatttttggctac
aaacagcaagggccagaggctgttaggtccctgaatgtgttctactatttgacttacgaa
ggagctgttaacttgagttcaataacggattccgtattaagagaggctgttgaagctcaa
atacgaagttttggacagaccccttcacaactgctcatagaaccacatcctccaagaagt
tctgccatgcaggtgtatctcctcctgcagagtccattgatgttcacagaccaagctcaa
caggacgttatcatggttctaaagttcccatccaactcccctgtcactcatgtagcagcc
aacacccagcctggtctggccactcctgctgtgatcacagttactgcaaataggctattt
gctgtaaacaagtggcataatcttcctgctcatcaaggtgctgtacaagaccagccttac
cagctgccagtggaaatcgatcctctcatagccagcaatacaggtatgcacaggaggcaa
atcactgaccttttagaccaaagcattcaggtgcattcccagtgttttgtcatcacctct
gataaccgttatatcttggtctgtggcttctgggacaagagtttccgagtttattctacc
gactcaggtaaactgatgcaagtaatatttggacactgggatgttgtaacctgtcttgct
cgttctgagtcctatattggaggaaattgttacattctctcaggatcgcgtgatgctaca
ttgctgctctggtactggaatggcaaaaccaatatcattggtgataacccaagaggtgat
tttgcaactcctcgagccattttgacaggacatgactatgagatcacctgtgctaccatt
tgtgctgaacttggcctggtaataagtggttcaaaagaaggaccatgtctcatacattct
atgaatggagatcttctgaggacattagaaggtcctggaacattagaaggtcctgaaaac
tgtctgaaaccaaaacttattcaagcttcaagagaaggtcactgtgtcatatattatgaa
aatggcctcttctgtgtattcggtgtgaatgggagacttcaagccgcgatggaaacagat
gacaagataagggcaattcaactgagtcgagatggacagtatctgcttacaggtggagac
aatggagttgtcatggtatggcagatgtgggacctcaaacagctttttgcttacccaggg
tgtgatgctggaatccgatccatggccctgtcgtatgaccaaaggtgtataatgactggc
atggcatctgggagcatagtggttttctacaatgatttcaatcgttggcaccatgagtat
caaaccagatactga
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integrated database retrieval system
