Strigops habroptila (Kakapo): 115610306
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Entry
115610306 CDS
T08851
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115610306 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shab03041
]
115610306 (DHX15)
03009 Ribosome biogenesis [BR:
shab03009
]
115610306 (DHX15)
Enzymes [BR:
shab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115610306 (DHX15)
Spliceosome [BR:
shab03041
]
Complex A
U2 snRNP components
U2 related factors
115610306 (DHX15)
Complex B
115610306 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
115610306 (DHX15)
Ribosome biogenesis [BR:
shab03009
]
Eukaryotic type
90S particles
Helicases
115610306 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Cas3-like_C_2
Atrophin-1
AAA_29
Flavi_DEAD
AAA_25
Apis_Csd
Motif
Other DBs
NCBI-GeneID:
115610306
NCBI-ProteinID:
XP_030347435
UniProt:
A0A672V005
LinkDB
All DBs
Position
7:complement(19009649..19058959)
Genome browser
AA seq
765 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSTDGKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLR
PSSNSTYYASAGLQTIKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDIL
IRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD
VMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD
ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERD
YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYS
TLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPR
IRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSV
VLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQ
LAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNV
YHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR
KALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTC
TDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccaccgcttagatctgggggacgattacagctccagcaagaaacgctcc
accgacgggaaagatcgtgaccgggacagggaccgtgatgaccgttctaaagatcgcgac
agggatcgtgacagagatagagatcgtgacagagaaagggacaaggaaaaagatttgcga
ccttcgtctaactctacctattacgcatctgctgggttacaaaccataaaaccagcaatg
attccacacagtattaaccctttcacaaatctaccacatacaccacgatactatgacatc
ctgaaaaaaaggctacaacttcctgtctgggaatataaagaaagatttacagatattttg
ataaggcatcagtcatttgtgctggttggagagactgggtctggtaaaacaacacagatc
cctcaatggtgtgttgactacatgcgctcgttacctggaccaaaaaggggagtggcatgt
acccagcctaggagggtagctgcaatgagtgtggcacagcgggttgctgatgagatggat
gtcatgctgggccaggaggttggttactctattcgatttgaagactgcagtagtgcaaaa
acaattctgaagtatatgactgatgggatgttacttcgcgaagccatgaatgatcctttg
ctggagcgctatggtgttataattcttgacgaggcccatgagagaacactggctactgat
attttgatgggagtcttgaaggaagttgtaagacaaagatctgatttgaaggttatagtt
atgagtgctactttagatgctggcaagtttcagatctattttgataactgtcctcttctg
actatcccgggtcgcacccatcctgtggagatattctatactccagaaccagaaagggac
taccttgaggccgccattcgaacagtgatccagattcacatgtgcgaagaagaggaagga
gatctcctactctttcttactggacaggaggagattgatgaagcttgcaaaaggataaaa
cgtgaaatcgatgatttaggccctgaagttggtgacatcaaaatcattccattgtattcc
acccttcctccacaacagcagcaaaggatttttgaacctcccccaccaaaaaaacaaaat
ggagcaataggaagaaaggttgttgtgtccactaatattgctgagacatcattaacaata
gatggtgttgtgtttgtgattgatcctggctttgcaaaacagaaggtatacaatcctcgg
atcagagtggagtctctcttggtgactgcaataagtaaagcttctgctcagcagcgagct
ggccgtgctggccgcaccaggccaggcaagtgcttcaggctgtatacagagaaggcttac
aaaactgaaatgcaggacaacacataccctgaaattttgaggtctaacttgggatctgta
gtactgcaactcaagaagcttggtatagatgatttggtgcactttgattttatggatcct
ccagctcctgaaactctgatgagagccttagagcttttgaattatctggctgctttaaat
gatgatggagacttgactgagttgggatccatgatggctgaatttccactggacccacaa
ctggctaaaatggttattgcaagttgtgactacaactgttctaatgaggtcctatctatt
actgccatgttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagcagca
gatgaagccaagatgaggtttgcccacatagatggagatcatttgacgttgctgaatgtc
taccatgctttcaaacaaaatcatgagtcggttcagtggtgttacgacaacttcattaac
tacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggataga
tttaatttgcctcgtagaagcacagactttaccagccgagactattacatcaacataaga
aaggcattagttaccgggtatttcatgcaggtggcacatttggaacggacggggcattac
ttaacagtgaaagacaaccaggtggtgcagttgcatccctccactgttcttgatcataaa
ccagaatgggtgctctacaatgagtttgtccttacaacaaagaattacatccggacatgt
acagacatcaagccagaatggctggtgaaaattgccccacaatattatgacatgagcaat
tttccacagtgcgaagcaaagagacagttggatcgcatcattgccaaacttcagtccaag
gaatactcacagtactga
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