Strigops habroptila (Kakapo): 115610504
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Entry
115610504 CDS
T08851
Symbol
PCDH10
Name
(RefSeq) protocadherin-10 isoform X1
KO
K16499
protocadherin delta 2
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shab04515
]
115610504 (PCDH10)
Cell adhesion molecules [BR:
shab04515
]
Cadherins
Protocadherins
115610504 (PCDH10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
115610504
NCBI-ProteinID:
XP_030347977
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Position
7:complement(68043931..68077920)
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AA seq
1076 aa
AA seq
DB search
MIVLFLFALLWMVEGALCQLHYTVQEEQEHGTFVGNIAEDLGLDITKLSARRFQTAPNSR
SPYLELNLETGVLYVNEKIDREQICKQSPSCLLHLEVFLENPLELFRVEIEVLDINDNPP
SFPEPDLTVEISESATPGTRFPLESAFDPDVGTNSLRTYEITPNSYFSLDVQTQGDGNRF
AELVLDKPLDREQQAVHRYVLTAVDGGQPQQRTGTALLTIRVLDSNDNVPAFEQPVYTVS
LPENSPPGTLVLQLNATDPDEGQNGEVIYSFSSHISARARELFGIAPRTGRLEVSGELDY
EESSVYQVYVQAKDLGPNAVPAHCKVLVRVLDANDNAPEISFSTVKEAVSEAAAPGTVVA
LFSVSDRDSEENGQVQCELLQGDAPFRLKSSFKNYYTIVTEGPLDREQPGGDAYTLTVVA
RDRGEPPLSTSKSIQVRVSDVNDNAPRFSQPVYQVYVSENNVPGAYIYAVSATDRDQGAN
AQLAYSILESQIQGMSVFTYVSINSENGFLYALRSFDYEQLKEFSFQVEARDAGEEPQPL
AGNATVNIIVVDQNDNAPAIVSPLPGRNGTPAREALPRGAEPGYLVSRVTAVDADDGENA
RLTYSIVRGNEASLFRMDWRTGELRTARRVPAKRDPQRPYELVIEVRDHGQPPLSSTAAI
QVVLVDGAAERPGGGGGGLGAGAGAGAGGGGGGGSGEHRPSRSGGDTSLDLTLILIIALG
SVSFIFLLAMIVLAVRCQKEKKLNIYTCLASDCCLGCCCCCPCCSRQARARKKKLSKSDI
MLVQSSNVPSNPAQVPVEESGSFGSHHHNQNYCYQVCLTPESAKTDLMFLKPCSPSRSTD
AEHNPCGAIVTGYADQQPDIISNGSILSSETKHQRAELSYLVDRPRRVNSSAFQEADIVS
SKDSGHGDSEQGDSDHDATNRGQSSVSFSLMLAGMDLFSNCTEECKALGHSDRCWMPSFV
PSDGRQAADYRSNLHVPGMDSVPDTEVFETPEAQPGAERSFSTFGKEKALHNTLERKELD
GLLSNTRAPYKPPYLKHGWLQSNPHPSSPSPSRVSHPLPGCTTSKALAISGSQSGL
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgctattcctctttgccttgctctggatggtggagggggccctttgccagctc
cattacacggtgcaggaagagcaggagcatggcacgttcgtggggaatatcgccgaggac
ctgggcttggacattacaaaactttcggctcgccgcttccagacggcgcccaactcccgc
agcccttacctggagctcaacctggagaccggggtgctctacgtgaatgagaagatagac
cgggagcagatctgcaagcagagcccctcctgcctgctgcacctggaggtcttcctggag
aaccccctcgagctgttccgggtggagatcgaggtgctggacatcaacgacaaccctccc
tccttcccggagcccgacctcaccgtggagatctcggaaagcgccacgccgggcacccgc
ttcccgctggagagcgccttcgaccccgacgtgggcaccaactcgctgcgcacctacgag
atcacccccaacagctacttctccctcgacgtgcagacgcagggcgacggcaaccgcttc
gccgagctggtgctggacaagcccctggaccgggagcagcaagcggtgcatcgctacgtg
ctgaccgcggtggacggcgggcagccccagcagcgcaccggcaccgccctgctcaccatc
agggtgctggactccaacgacaacgtccccgcctttgagcagcccgtctacaccgtgtcg
ctgccggagaactcgccgccgggcacgctggtgctgcagctcaacgccaccgaccccgac
gagggtcagaacggcgaggtgatctactccttcagcagccacatctcggcccgcgcccgg
gagctcttcggcatcgcgccgcgcaccgggcggctggaggtgagcggcgagctggactac
gaggagagcagcgtgtaccaggtgtacgtgcaagccaaggacctggggcccaacgccgtg
ccggcgcactgcaaggtgcttgtgcgggtgctggacgccaacgacaacgcgcccgagatc
agcttctccaccgtcaaggaggcggtgagcgaggcggcggcgccgggcacggtggtggcc
ctcttcagcgtctcggaccgcgactcggaggaaaatgggcaagtgcagtgcgagctgctg
cagggcgacgctcccttccgcctcaagagctccttcaagaactactacaccatcgtcacc
gaggggccgctggaccgcgagcagccgggcggcgatgcctacaccctcaccgtggtggcc
cgggaccgcggcgagccgccgctgagcactagcaagtccattcaggtgcgggtgagcgac
gtgaacgacaacgcgccgcgcttcagccagcccgtctaccaggtctacgtgagcgagaac
aacgtgcccggcgcctacatctacgccgtcagcgccaccgaccgggaccagggcgccaac
gcccaactcgcctactccatcctggaaagccagatccagggcatgtccgtcttcacctac
gtctccatcaactccgagaacggcttcctctacgccctccgctccttcgactacgagcag
ctcaaggagttcagcttccaggtggaggcccgcgacgccggcgaggagccgcagccgctg
gccggcaacgccaccgtcaacatcatcgtggtggaccagaacgacaacgctcccgccatc
gtcagccccctgcccggccggaacggcaccccggcgcgggaggcgctgccccgcggcgcc
gagccgggctacctggtgagccgggtgacagcggtggacgccgacgacggggagaacgct
cgcctcacctacagcatcgtgcgaggcaatgaggccagcctcttccgcatggactggcgc
accggggagctgcggaccgcgcgcagggtgccggccaagcgcgacccccagcgcccctac
gagctggtcatcgaggtgcgcgaccacgggcagccgccactctcctccaccgccgccatc
caggtggtgctggtggacggcgcggccgagcggcccggcggcggcggcggcggcctgggc
gcgggagcgggagcgggcgcggggggcggcggcggcggcgggtccggcgagcatcgcccc
agccgctccgggggggacacctcactcgacctcacccttatcctcatcatagccctgggc
tccgtctccttcatcttcctgctggcgatgatcgtgctggccgtgcgctgccagaaggag
aagaagctcaacatctacacctgcctggccagcgactgctgcctgggctgctgctgctgc
tgcccttgctgcagccgccaggcgcgggcccgcaagaagaagctcagcaagtcggacatc
atgctggtgcagagctccaacgtgcccagcaacccggcgcaggtgccggtggaggagtcg
ggcagcttcggatcccaccaccacaaccagaactactgctaccaggtctgcctcaccccc
gagtccgccaagaccgacctgatgttcctcaagccctgcagcccttctcgcagcaccgac
gccgagcacaacccctgcggggccatcgtcaccggctacgccgaccagcagcccgacatc
atctccaacggcagcatcttgtccagcgagacaaaacatcagcgtgctgagctcagttat
ctagttgacagaccccgacgagtaaacagttctgcattccaggaagcagacatagtaagc
tctaaggacagtggtcatggagacagtgagcaaggagacagtgatcatgatgccactaat
cgaggtcaatcctctgtttctttttctctcatgcttgcaggcatggatctcttctccaat
tgcacggaggaatgtaaagcactgggccactcagatcggtgctggatgccttcctttgtt
ccatccgatggacgccaagctgcagattaccgcagcaatctgcatgtacctggcatggac
tccgttccagacactgaagtgtttgaaacaccagaagcccagccgggcgcagaaaggtcc
ttctccaccttcggcaaagagaaggcccttcacaacactctggaaaggaaggagttggat
ggactgctgtctaatacacgagcgccttacaaaccaccatatttgaaacatgggtggctg
cagagtaatccccatccttcatcccccagccccagccgtgtgtctcaccctttacctgga
tgcaccacttcaaaggcacttgccatctctggatctcaaagtggattataa
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