Strigops habroptila (Kakapo): 115610509
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Entry
115610509 CDS
T08851
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04010
MAPK signaling pathway
shab04210
Apoptosis
shab04218
Cellular senescence
shab04620
Toll-like receptor signaling pathway
shab04621
NOD-like receptor signaling pathway
shab04622
RIG-I-like receptor signaling pathway
shab04623
Cytosolic DNA-sensing pathway
shab04625
C-type lectin receptor signaling pathway
shab04920
Adipocytokine signaling pathway
shab05132
Salmonella infection
shab05164
Influenza A
shab05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115610509 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115610509 (NFKB1)
04218 Cellular senescence
115610509 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115610509 (NFKB1)
04621 NOD-like receptor signaling pathway
115610509 (NFKB1)
04622 RIG-I-like receptor signaling pathway
115610509 (NFKB1)
04623 Cytosolic DNA-sensing pathway
115610509 (NFKB1)
04625 C-type lectin receptor signaling pathway
115610509 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
115610509 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
115610509 (NFKB1)
05168 Herpes simplex virus 1 infection
115610509 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
115610509 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115610509 (NFKB1)
Transcription factors [BR:
shab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
115610509 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
115610509
NCBI-ProteinID:
XP_030347997
LinkDB
All DBs
Position
7:52456903..52519199
Genome browser
AA seq
982 aa
AA seq
DB search
MAGEDSYIMGVSDPQMFAMDQFMGMNALFNNTNYITSDLPLRTADGPYLQIIEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVG
KFCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPEL
GYLQAEGCGDRQLTEREREIIRQAAVQQTKEMDLSVVRLMFTAFLPDSNGSFTRKLDPVI
SDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
KEEVQRKRQKLMPNFSDGFGGGSGAGGGGMYGGGGGGAGSGFSYPSYGYSAFGGMHFHPG
TTKSNAGMKHGLSNSTAEQDGRSSDKQSDKRDVKRDVKVETMERNECRIFGYHEEKEDAA
SFCKSEVNKANWRWQDGLFLEKAMQLAKRHCNALFDYAVTGDVKMLLAVQRHLTAVQDDN
GDNVLHLAIIHLHSKLVRDLLEVMADLNYNDIINMRNDLYQTPLHLAVITKQAEVVEDLL
KAGADVSLLDRHGNSVLHLAAAEGDDKILGLLLKHKKISMMVDLSSGEGLSAIHMVVMAN
SMSCLKQLIAAGVNVNAQEQKSGRTALHLAVEQENIPLAGCLLLEGDADVDSTTYDGTTP
LHIAAGRGSTKLAAVLKAAGANPHIENFEPLFDLDDLKDDEDDDEGIVPGTTPLDMAASC
EVYDILNGKPYESAVVSEDLLMQGHLRELNESSKMQLYKLLELPDPNKNWSTLAQKLGLG
ILNNAFRLSPSPSKTLLDNYEVSGGTVQELIAALRQMDHTEAIEIIQKALSSSQSSSHLE
DNTAKAPPLSSPPTFAKGETGELYNSKFQDSESVCDSGVETSFRKLSFTYSDSPSSKSSV
TLSKMTLGYGHESSVQSNYIAN
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagaagattcctatattatgggagtgtctgatccccaaatgtttgcaatggat
cagttcatgggaatgaatgcattatttaataatacaaattacatcacttcagacttacca
ctacgaacagcagatggaccatatcttcaaatcatagaacagccaaaacagagggggttt
cgtttccgatatgtatgtgaagggccttcacatggtgggcttcctggtgcttctagtgaa
aagaacaaaaagtcataccctcaggtcaaaatttgcaattatgttggacccgcaaaagta
atcgtccagttagtaactaatgggaaatatgtccacttacacgctcacagcttggtgggt
aaattttgtgaagatggagtatgcactgttaatgcaggacctaaagatatggttgtaggg
tttgcaaatcttggaatacttcatgtcacaaagaagaaagtgtttgaaactctggaaaca
cgcatgatagatgcttgcaaaaaaggatacaacccgggactcctggtgcatcctgaactt
ggctatctgcaggcagaaggatgtggagacagacagctaactgaacgagaaagagaaatt
attcgtcaggcagcagtacagcagactaaagaaatggatctcagtgtggtgcgtctgatg
tttacagcctttctgcctgacagcaatggtagtttcacacggaaacttgatcctgttata
tcagatgcaatatatgacagcaaagctcccaatgcctccaacttaaaaatcgtcagaatg
gatagaacagcagggtgtgtaactggaggagaagagatttaccttctctgtgacaaggtt
cagaaagatgatattcaaatacgtttctatgaggaggatgagaatggtggtatgtgggaa
ggctttggagacttttcacctacagatgtacatagacagtttgctattgtgttcaaaaca
cccaagtatcgagatgtcaatatcacaaaaccagcatctgtatttgtacaactgcgtcgg
aaatctgatctagaaacaagcgaaccaaagccttttctctactatccagaaatcaaagat
aaagaagaagtgcaaaggaaacgacagaagctcatgccaaacttctctgatggcttcggt
ggaggcagcggcgcaggaggcggtggcatgtatggagggggaggtggcggtgctggctct
ggcttcagttatccttcatatggatactctgctttcggagggatgcatttccaccctggc
acaacaaagtccaatgctggaatgaaacatggactatcaaatagcacagctgaacaagat
gggaggagctctgataaacaaagcgacaaacgggatgtgaaacgggatgtgaaagtggaa
actatggagagaaatgagtgcagaatctttggttatcatgaggagaaggaggatgctgct
tctttctgtaaaagtgaagtaaacaaagcaaattggaggtggcaggatggtctgttcctg
gagaaggccatgcagcttgccaagcgtcactgcaatgctctctttgattatgctgtaacc
ggagatgtgaagatgctgttggctgttcagcgccatctcactgctgtccaggatgataat
ggagacaatgtccttcatttagcaattatccaccttcatagtaagctggtgagagacctc
ttggaagtgatggctgatttgaattacaatgacatcattaacatgagaaacgacctttat
cagacccccttgcacctggcagtaatcacaaagcaggcagaagtggtagaagacttgctg
aaggctggagcagatgtcagccttctggatcgccacggtaattctgtcttacatttagct
gctgctgaaggagacgacaagattttgggtctactcctcaagcataagaagatatctatg
atggtcgacctttccagtggtgaaggtctcagtgcaattcacatggtggtgatggcaaat
agcatgtcctgcctcaaacagctgattgctgctggagttaacgtcaatgctcaggaacaa
aaatcaggacgaactgcattgcatttagctgttgaacaagagaacatccccttggcaggc
tgccttttgcttgagggtgacgcagatgtggacagcactacatatgatgggacaactcct
cttcacatagcagctggaaggggctctacaaaattggcagcagttctcaaagcagcaggt
gcaaatcctcacattgagaactttgagccattgtttgatctagatgacttgaaagatgat
gaagatgacgatgaggggattgtgcctggaacaacaccacttgatatggcagccagctgt
gaggtgtatgacatattaaatggcaaaccctatgagtccgcagtggtttcggaggattta
ctgatgcaaggacatttaagagagctgaatgaaagttccaagatgcagctttacaaactg
ttggaattacctgatccaaacaaaaactggtccactctagcacaaaaactgggtcttggc
atacttaataatgccttcaggttgagcccttccccatcgaaaactctactcgataactat
gaggtttctggtggcacagttcaagagttgattgctgctttgagacagatggatcacaca
gaagccattgaaatcattcagaaagcactatccagctctcaaagctcatctcacctggag
gataatacagcaaaagctcctcccttgtcatcaccacccacctttgcaaaaggagagaca
ggtgagctctacaatagcaaatttcaagacagcgaaagtgtgtgtgacagtggtgtggag
acctccttccgcaaactgagctttacttattcggactctccgagcagcaagtcatcagta
acacttagcaaaatgacccttggctacggacatgaaagttcagtgcaaagcaattatata
gccaactag
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