Strigops habroptila (Kakapo): 115610585
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Entry
115610585 CDS
T08851
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04140
Autophagy - animal
shab04148
Efferocytosis
shab05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115610585 (VPS16)
04148 Efferocytosis
115610585 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115610585 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115610585 (VPS16)
Membrane trafficking [BR:
shab04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
115610585 (VPS16)
Hops complex
115610585 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
115610585
NCBI-ProteinID:
XP_030348195
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All DBs
Position
7:complement(299147..308687)
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AA seq
838 aa
AA seq
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MDCYTANWNPLGEDTFYRKFELYTMGWNLKEDLRDCMVAAAPYGGPIALLKNHARKEKSP
GARPLLEIYSASGLLLASIPWKSGQLVQLGWTASEDLLCIQEDGTVLIYNLFCEFKRHFS
MGNEVLQNHVLEAKVFHSEFGTGVAILTGSHRFSLATNIEDLKLRRMPEVPGLQKPPSCW
AVLSQDRVTIVLLAVGQDLYLLDNTSCSVVTPPGLSPSAGAYVQMAVSFTHRCLALLTDT
GYIWMGLASLKEKLCEFHCSIRSPPKQMVWCMRPRSRQRAVVVAWDRQLLVAGSSSEGIQ
FVLDEDSYLVPELDGVRILSRSSHEFLQEIPEASQEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIKEQKLLPEAVSQCIEAAGHEHEPDTQKALLRAASFGKCFLDKFPPESFVR
MCQDLRVLNAIRDYQIGIPLTFTQYKRLTIEVLLDRLVLRRLYPLAIRMCEYLRLSEIQG
VSRILAHWACYKVQQKDKSDEEVAQAINHKLGDTPGISYSEIAARAYDCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVYTVVLHLKNELNRGTFFMTLQNQPVA
LSLYRQFCKHQERDTLKDLYNQDDNHQELGNFHVHASYSEKRIEGRVGALQNALDEFYKA
KNEFAAKATEEQIKLLRLQRHLQEDFDKPYLDLSLHDTVSNLILDGHHKRAEQLYREFKI
PDKRYWWLKISALANRGDWEEMEKFSKSKKSPIGYLPFVEIAVKHHNRYEAKKYAPRVPP
EQRVRAFVLVGDLDQAADAAIEHKNETEMNFVLSKCSASTDAAVAEKLNRARAQLLKK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggactgttacacggccaactggaacccgctgggcgaggacaccttctaccggaagttc
gagctctacaccatggggtggaacctgaaggaggacctgcgggactgcatggtggcagct
gccccgtacggggggcccatagctctgctcaagaaccacgctcggaaggagaagtccccg
ggcgcccgcccgctgctcgagatctactcggcctcggggctgctcctggccagcatcccg
tggaagagcgggcagctggtgcagctgggctggacggccagcgaggacctgctgtgcatc
caggaggacggcaccgtgctcatctacaacctcttctgcgagttcaagcgccacttcagc
atgggcaacgaggtgctgcagaaccacgtgctggaggcgaaggtgttccacagcgagttc
ggcaccggcgtggccatcctgaccggcagccaccgcttctccctggccaccaacatcgag
gacctgaagctgcgcaggatgcccgaggtgcccgggctgcagaagccgccgtcgtgctgg
gctgtgctgtcccaggacagggtcaccatcgtcctgctggcggtggggcaggacctctac
ctcctggacaacacctcctgctccgtggtgaccccccctggcctgagcccctcagccggt
gcctacgtgcagatggctgtgtccttcacccaccggtgcctggcgctcctcaccgacacc
ggctacatctggatggggctggcgtcactcaaggagaagctctgtgagttccactgcagc
atccgctccccacccaagcagatggtttggtgcatgcggccccgcagccggcagcgcgct
gtggtggtggcctgggaccggcagctcctggtggccgggagctccagcgagggcatccag
tttgtcctggatgaggactcctacctggtgcccgagctggacggggtccgcatcttgtcc
cgcagctcccacgagttcctgcaggagatcccagaggccagccaggagatcttcaagatc
gcctccatggcgccgggggctctcctgctggaggcgcagaaggagtacgagaaggagagc
cagaaggcagacgagtacctgcgggagatcaaggagcagaagctgctcccggaggccgtg
agccagtgcatcgaggccgcgggccacgagcacgagcccgacacccagaaggcgctgctg
agggcagcctccttcgggaagtgcttcctcgacaagttccccccggagagcttcgtgcgc
atgtgccaggacctgcgggtgctcaacgccatccgggactaccagatcggcatccccctc
accttcacccaatacaagagactcaccatcgaggtgctgctggacaggctggtgctgcgg
cggctctacccgctggccatcaggatgtgcgagtacctgcgcctctccgagatccagggc
gtgagccgcatcctggcacactgggcctgctacaaggtgcagcagaaggacaagtcggac
gaggaggtggcgcaggccatcaaccacaagctgggcgacacccccggcatctcctactcc
gagatcgccgcccgcgcctacgactgcggccgcacggagctggccatcaagctgctggag
tatgagccccgctccggggagcaggtcccgctgctgctcaagatgaagaggagcaagttg
gcgctgagcaaagccatcgagagcggggacaccgacctggtctacaccgtggtgctgcac
ctcaagaacgagctgaaccgcggcaccttcttcatgacgctgcagaaccagccggtggcg
ctgagcctgtaccgccagttctgcaagcaccaggagcgggacacgctgaaggacctctac
aaccaggacgacaaccaccaggagctcggcaacttccacgtccatgccagctacagcgag
aagcgcatcgaggggcgcgtgggggccctgcagaacgcgctggacgagttctacaaagcc
aagaacgagttcgcagccaaggccacggaggagcagatcaagctgctgcggctccagcgg
cacctgcaggaggactttgacaagccctacctcgacctctcgctgcacgacaccgtctcc
aacctcatcctggacggtcaccacaagcgcgcggagcagctctaccgcgagttcaagatc
cccgacaagaggtactggtggctgaagatcagcgccttggccaaccgcggggactgggag
gagatggagaagttctccaagagcaagaagtcgcccatcgggtacctgcccttcgtggag
atcgcggtgaagcaccacaaccgctacgaggccaagaagtacgcgccccgtgtgcccccc
gagcagcgcgtcagggccttcgtcctcgtgggggacctggaccaggcggccgatgccgcc
atcgagcacaagaacgagaccgagatgaactttgtcctgtccaagtgctcggccagcacc
gacgctgccgtggccgagaagctgaaccgggcccgggcccagctcctcaagaagtga
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integrated database retrieval system
