Strigops habroptila (Kakapo): 115610633
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Entry
115610633 CDS
T08851
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
shab00536
]
115610633 (SLIT2)
Glycosaminoglycan binding proteins [BR:
shab00536
]
Heparan sulfate / Heparin
Axon guidance molecules
115610633 (SLIT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRRCT
LRR_1
hEGF
EGF_TEN
LRR_14
EGF_DL_JAG
EGF_3
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
115610633
NCBI-ProteinID:
XP_030348292
LinkDB
All DBs
Position
7:17437718..17703093
Genome browser
AA seq
1541 aa
AA seq
DB search
MMCGWGKLALSLGLLLAMAGEVVPQPCPAQCSCSGSTVDCHGLALRGVPRNIPRNTERLD
LNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLFSEL
LFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLT
LNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSH
LRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPTACTCSNNIVDCRGKGLTEIPTN
LPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYG
NKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS
PLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFR
CSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAE
LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLESV
RHKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLS
TLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGND
DNSCSPLSRCPAECTCLDTVVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSYYK
HLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDI
SVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLL
LTTPSKKFTCQGPVDVNILAKCNPCLSNPCKNDGTCNSDPVDFYRCTCPFGFKGQDCDIP
IHACISSPCHHGGTCHLKEGEKEGFWCTCADGFEGENCEVNVDDCEDNDCENNSTCVDGI
NNYTCLCPPEYTAANLNEVEKGELCEEKLDFCAQNLNPCQHDSKCILTPKGYKCDCTPGY
VGEHCDIDFDDCQDNKCKNGAQCTDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNY
ECQNGAQCIIKESEPICQCLSGYQGEKCEKLISINFINKESYLQIPSAKIRPQTNITLQI
ATDEDSGILLYKGDKDHIAVELYRGRVRVSYDTGSYPASAIYSVETINDGNFHIVELLAM
DQILSLSIDGGSPKIITNLSKQSTLNFDSPLYVGGMPVKNNIAALRQSPGQNGTSFHGCI
RNLYINSELQDFRNVPLQMGILPGCEPCHKKVCVHGTCHATSQSGFSCECEGGWTGPLCD
QQTNDPCLGNKCVHGTCLPINAFSYSCKCLQGHGGVLCDEEEMLFNPCQSIRCKHGKCRL
SGLGKPYCECGSGYTGDSCDTEISCRGERIRDYYQKQQGYAACQTTKKVSRLECKGGCST
GQCCGPLRSKRRKYSFECTDGSSFVDEVEKVVKCGCTNCPS
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtggctgggggaagctcgccctgtccttggggctgctgctggcgatggcgggc
gaggtggtgccgcagccgtgcccggcgcagtgctcctgctcggggagcaccgtggactgt
cacgggctggcgctgcgcggggtcccgaggaacatcccccgcaacaccgagaggctggat
cttaatggaaataacatcacaagaatcaccaagaccgactttgctggtctaaggcacctt
cgagttcttcagctcatggagaacaagattagtactattgagagaggagcattccaggat
ttaaaagaactggagaggctgcgcctaaacagaaataacctccagttgttttctgaactg
ctctttctggggacgccgaagttatacaggcttgatctcagtgaaaatcagattcaagcg
ataccaaggaaggcattccgaggagcagtagacataaaaaatctgcaactggattacaac
cagatcagctgtattgaagatggggcattcagggctctgcgcgacctggaagtgctcact
ctcaataataacaacatcactcggctgtccgtggcgagtttcaaccatatgcccaaactc
aggacatttcgccttcactccaacaacctctactgtgattgccacctggcctggctgtct
gactggctgcggcagcggccacgggttggcctctacacccagtgcatggggccatcccac
ctccggggacacaatgtagctgaggtccaaaaacgggagtttgtctgcagcgatgaggaa
gaaggtcaccaatccttcatggctccgtcctgcagtgtcttgcattgccctactgcatgc
acctgtagtaacaacatcgtggactgtcgtgggaaaggccttactgagatcccaacaaac
cttccagaaaccattactgaaatacggttagaacaaaattcaatcaaggtcatacctcct
ggagctttctcaccatataaaaagcttcgaagaattgacctgagcaataaccagatctct
gaagcagctccagatgctttccagggcttacgttcacttaattcactggtcctgtatggg
aataaaattacagaacttccgaagggcctctttgaaggactcttttctctgcaactgcta
ttattgaatgccaacaagatcaactgcctacgagttgatgcttttcaagatctgcacaac
ctgaatctcctttctctgtatgataataagcttcagacgattgcaaaaggcaccttctca
cccctacgtgcaattcagaccttgcatttggctcagaacccatttatctgtgactgccat
ctgaagtggctggcggattatcttcatacaaatcccattgagaccagtggtgcccgttgc
actagcccccgccgtctggcaaacaaaaggatcggccagatcaaaagcaagaaattccgc
tgctcagctaaagaacagtatttcattccaggcactgaagattacagatccaaattaagt
ggagactgctttgcagatttggcttgccctgagaaatgtcgctgtgaagggaccacagtg
gactgctccaatcagaaactcaacaaaattcctgatcatatcccgcagtacacagcagaa
ttgcgactaaataacaatgaattttcagtcctggaagctactggaatctttaagaaactt
cctcagctgcgtaaaataaacctgagcaataacaagattacagatatcgaagaaggagca
tttgacggagcctctggtgtgaatgaactattgctcactagtaaccgcttggaaagtgtt
cgacacaaaatgttcaaaggactagaaagtctcaaaacactgatgctgaggagcaaccgc
gtgagctgtgtgggaaatgacagcttcacgggcctgagctcagtccgcctgctctcactg
tatgacaaccagatcaccaccgtggcacctggctccttcgatacactgcattcactctct
acgttaaacctcttggccaatcccttcaactgcaactgccaccttgcatggcttggagac
tggctaaggaagaaacgcattgtgacggggaaccctcggtgccaaaaaccttacttcctc
aaagagattcccatccaggatgtagcaattcaggattttacatgtgatgatggaaatgat
gacaatagctgctccccactgtcccgctgtcctgcagaatgtacttgtctagacacagta
gttcgctgcagcaacaaaggcctaaaagctttgcctaaaggcatccccaaagatgtaact
gaactttatttggatggaaatcaatttacccttgttccaaaagagctttcctactacaag
catttaacactcatagatttaagtaacaacagaatcagcactctttctaatcagagcttc
agcaacatgactcagctgctcaccttaattcttagttataaccgcctgaggtgtatccct
gcacggacttttgatgggttgaaatcacttaggttgttgtctttacatggcaatgatatt
tctgttgttcctgaaggagcttttaatgatctttcagcattatcacacctggctattgga
gcaaatcctctttattgtgactgtaacatgcagtggctatctgactgggtaaaatcagaa
tacaaagagcctggtattgcacgttgtgctggtcctggagaaatggcagataaacttctt
ctcacaactccttctaaaaaattcacttgccaagggcctgtggatgttaatattcttgct
aagtgtaacccctgtttatcaaatccatgtaaaaatgacggaacctgcaacagtgatcca
gttgacttctatagatgtacttgcccatttggtttcaagggtcaagactgtgatattccc
attcatgcttgcattagtagcccatgccaccacggcggaacttgtcatttgaaagaagga
gaaaaagaaggtttctggtgcacttgtgcagatggattcgaaggtgaaaactgtgaagta
aatgttgatgactgtgaagacaatgactgtgaaaataattctacttgcgtggatggaatt
aataactatacttgcctttgtccaccggaatatacagctgctaatctgaatgaagtggaa
aaaggtgagctctgtgaggagaaattagatttctgtgctcaaaacctgaatccttgccag
cacgactcaaagtgtattttgacacccaaaggatacaaatgtgattgcacacctggatat
gtaggtgagcattgtgatattgactttgatgactgccaagacaacaaatgtaaaaatgga
gcacagtgtactgatgcagttaatggatatacatgtatttgcccagaaggatacagtggc
ttgttttgtgagttttcaccaccaatggttctacctcgcaccagcccttgtgataattat
gaatgtcaaaatggagcccagtgtatcataaaagagagtgaaccaatctgtcagtgttta
tcaggctaccagggtgagaaatgcgaaaagctgatcagtataaacttcatcaataaagaa
tcctatctacaaatcccgtcagcaaagatacgcccccaaaccaatatcactttacagatc
gccacagatgaagacagtgggatcctgctctacaaaggcgataaagatcatatagctgta
gagctgtaccggggtagagtgagggtcagctatgacacaggatcttacccagcctctgct
atctacagtgtggaaacaattaatgatggcaatttccatattgtggagctgctagctatg
gatcagattctgtctttatctattgatggaggaagccccaagataattaccaatttgtcc
aagcaatccactctgaattttgattctccgctgtatgtaggaggtatgcctgtgaaaaat
aacatagcagctttacgccagtctccaggacagaatggcaccagcttccatggttgcatc
cgtaacctatacatcaacagcgagctccaggacttcagaaatgtgccactgcaaatggga
attctgccaggttgtgagccttgtcacaagaaagtttgtgtgcatggaacatgccatgct
accagccagtcaggcttttcctgtgagtgtgaaggtggatggactggacccctgtgtgat
caacaaactaatgacccatgtcttggaaacaaatgtgtgcatggtacctgcttgccgatc
aatgcattttcatacagttgtaaatgcctgcagggacatgggggagtcctctgtgatgaa
gaagaaatgctgtttaacccctgccaatccatcaggtgtaaacatggcaaatgcaggctt
tcaggacttgggaaaccatattgcgaatgcggcagcggatacacgggggacagctgtgat
acagaaatctcttgtcgaggggaacgaatccgagattactaccaaaagcagcaagggtat
gctgcgtgccagacgaccaagaaggtatcaagactagaatgtaaaggcggatgttcaacc
gggcagtgctgtggaccactaaggagcaagagacggaaatactcttttgaatgcactgac
gggtcatcatttgtggacgaggttgaaaaagtggtgaagtgtggctgtacaaattgtccc
tcctaa
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integrated database retrieval system
