Strigops habroptila (Kakapo): 115610688
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Entry
115610688 CDS
T08851
Symbol
CNGA1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
115610688 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shab04040
]
115610688 (CNGA1)
Ion channels [BR:
shab04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
115610688 (CNGA1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
CDC45
Ion_trans_2
Connexin
DUF4551
NPR3
Sec62
T6SS_Tle1-like_C
ADI
RNA_polI_A34
SlyX
Zip
DUF4614
Motif
Other DBs
NCBI-GeneID:
115610688
NCBI-ProteinID:
XP_030348445
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Position
7:complement(27350173..27354758)
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AA seq
649 aa
AA seq
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MRVGVIETHRSHTIIPSVVVQDTSEDAGLMDKRENRYARQRYLPSAFAQYNINNNSNKGE
EEKKKKKEKKSKSERKKDGETQKNKDKKEKNKKKDKSKNKENKEVKKEIFIIDPAGNMYY
NWLFCITMPVMYNWTMIIARACFDELQHDYLAVWFIIDYVSDVIYIADMFVRTRTGYLEQ
GLLVKEEQKLREKYKASFQFKLDFLSVIPTDILYFKLGLNYPELRINRLLRVARMFEFFQ
RTETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGADTWVYPNTSDPEFARLI
RKYVYSLYWSTLTLTTIGETPPPVQDSEYFFVVVDFLVGVLIFATIVGNVGSMISNMNAA
RAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKAVDEREVLKYLPDKLRAEIA
INVHLETLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICRKGDIGREMYIIKEGKLAV
VADDGITQFVVLSDGSYFGEISILNIKGSKAGNQRTANIKSIGYSDLFCLSKDDLMEALT
EYPDAKAMLEEKGKQILMKDGLLDIDIANLGSDPKDLEEKITYMEGAMDRLQTKFARLLA
EYDAAQQKLKKRLTQIEKILKPVIEQEFADLDLQEADPPTEKPGLSKAE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagggtaggagtgattgagacccatcgctcccatacaatcattcccagtgtggtagtg
caagacaccagtgaggatgctggattgatggacaaaagggaaaacaggtatgccaggcaa
cgctatctacccagtgcatttgcacagtacaatattaacaacaatagtaataaaggcgag
gaggagaagaaaaagaaaaaagaaaagaaaagcaagtcagaaagaaaaaaggatggagaa
acacaaaagaacaaggacaaaaaggagaaaaacaaaaaaaaagataagtccaagaacaaa
gaaaataaagaggtgaagaaagagattttcattattgatccagcaggaaatatgtattac
aattggttgttttgcatcacaatgcctgtcatgtacaactggaccatgattattgctaga
gcctgttttgatgagcttcagcatgactacttagcggtatggtttattattgattatgtt
tctgatgtcatctatattgctgacatgttcgtacggacaagaacaggttacctggagcaa
ggtcttctggtgaaagaagaacaaaagcttcgagagaaatataaggcatcttttcaattc
aaattagattttctgtcagtcataccaaccgacatcttatactttaagttaggactgaat
tacccagaattaagaataaataggctactcagagtagctcggatgtttgaattcttccag
cgaacagaaacaaggacaaactacccaaatatcttcaggatctctaaccttgtcatgtac
attgtgattattattcactggaatgcctgtgtgtactactcaatctcaaaagccattgga
tttggagctgacacatgggtctaccccaacacctctgatcctgaatttgcccgtctgatt
agaaagtacgtttacagtctctactggtcaacgctgaccctgactactatcggtgaaaca
ccccctcctgtacaagattctgagtatttctttgtggttgtcgacttcttggttggagta
ttgatttttgctaccattgtcggtaatgtgggctccatgatctccaacatgaatgctgcc
agggcagagtttcaagcaaggattgatgctatcaagcagtatatgcactttcggaatgtg
agtaaagacatggaaaaaagagttataaagtggtttgactacctgtggacaaacaaaaag
gctgtggatgaaagggaagtcttgaagtatctgccagataaactaagagcagagattgca
atcaatgttcacctggaaacactaaaaaaagttcggatttttgcagactgtgaagctggt
ctgttggttgaactggttttgaaactccagccacaggtatacagtcctggagattatatt
tgcagaaaaggagatattgggcgagagatgtacattatcaaagaaggcaagctggcagta
gttgctgatgatggaattacccaatttgtggtcctaagtgatggcagctattttggagaa
atcagcattcttaatatcaaaggtagcaaagctggcaaccaaagaacagccaatattaaa
agtattggatactctgacttgttttgtctgtctaaagacgatctcatggaggctttaaca
gagtacccagatgcaaaggctatgctggaagaaaaaggaaagcaaatcctaatgaaagat
gggttgctggacattgacattgcaaatttaggaagtgatcctaaagatctggaagagaag
atcacctacatggaaggtgcgatggacaggttacaaacaaagtttgccaggttgttggct
gagtacgatgctgcacaacagaaactgaaaaaaagacttacacaaatcgagaaaatactg
aagccagttatagagcaagaatttgcagacttggatctgcaagaagcagatccacccaca
gagaagcctggattgtcaaaagcagaataa
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