Strigops habroptila (Kakapo): 115610779
Help
Entry
115610779 CDS
T08851
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shab04121
]
115610779
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
115610779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
115610779
NCBI-ProteinID:
XP_030348635
LinkDB
All DBs
Position
7:47266336..47286086
Genome browser
AA seq
948 aa
AA seq
DB search
MAEGRRQRRRGQGSGPPQSTAEHVWMQRKEKVQCSNHDATHRLVLSPDGKLSEHWAAASA
GCSKTRLVKELDNHDIVQIVCGDQHAMALTRGGELFTWGQNTHGQLGVGSQAMLTPQPQL
VERLKGIPLAQIAAGGAHSAAVSLSGAVYSWGKNDFGQLGLGDMQDRDCPSYVRALEHWK
AVFISCGADHTAVLSKEGLVCTFGAGGAGQLGHNSTRNELTPRVVAELWGARVSQVACGR
QHTLVYVPSLDKVYSFGSGEDGQLEDETEPNQLIPLPIKIPANTGQSCQRKRTSQKVIEI
TAGGNQSIVLYKEDQSTHLDGIATLKDKEVDAWISNSSSQHWESIKKNISVIFSSEACIN
GSFLEKRDKHFKTSKEVSGVDMSQVKCFYEKIRKKRNVFQKVQKEIEKLLPSLSSSPISP
ENFRVYLILPFLLQGENDSSYRSLRLLAQAITKLQSKDLQTLECLWSNLETSFLKELVIL
YQRVSQKNLSQFIIELIYDQRDPFSLRPHETVTLQILQILYQVNSRTGLRVQENNFYVPE
VKPIIIMFWSFNMKNMALWKLTEYPCIFDMQDKINVHSAECNALSSVSTDTHIIAMGNEE
WFFPVRRQCLLQDIWTHLNRATTQQFRKILKVSFAGEQGVDEGGLSQELFSVAVRTLCQP
ITGAFRRVASGLMWLPSQASGGEDALFRIGTLCGMALYNGCIAPFSFPRALYRKLLGLAP
TLEDLEELLPDVGRSLQGILHEECDHVLESLDMNFTIMEEGGSTGVVELKKNGANIPVTM
DNRKEFVDLYVNYVLNESIQKPFEAFMQGFLRGCPGRKWKMFLPVELQTVLQGHTKYDWH
LLEKSVMYGRYKSLDKTIRNFWIVFHKLPEEKKKMFLVFLTGSDRISAYELEHFKFCIVD
PQAENPDELHLVANTCHHILFLPRYSSKRILKKKLLYAIEHNESFGLS
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggacggcggcagcggcggcggggccaggggagcggccccccgcagagcacg
gcagagcacgtgtggatgcagaggaaggagaaggtgcaatgctcaaaccatgatgcaaca
cataggcttgttctctcccctgatgggaagctttctgagcactgggctgcagcttcagct
ggctgctctaagacaaggctggtgaaggaactagacaaccatgacattgttcaaatagtg
tgtggggaccagcatgccatggctctaaccagaggaggtgagctcttcacgtggggccag
aacacccatggacagcttggagtggggagccaagccatgctcaccccccaaccacagctg
gtggaaagactaaagggcatcccactcgctcagattgctgctggaggagctcacagtgct
gccgtgtcactctctggagctgtgtactcctggggtaagaacgattttggccaactggga
ctcggagacatgcaagatagggactgcccatcatacgtcagagcattagagcactggaag
gctgtatttatctcgtgtggggcagatcatactgcagttctctccaaggaggggctggtg
tgcacctttggagcaggaggggctggccagcttggtcacaactccacccggaatgaactc
acgcctcgtgtggtggccgagctgtggggagcaagagtttcgcaggttgcctgtggaaga
cagcacaccctggtctatgttccctccttggacaaagtctattcgtttggttctggtgaa
gacgggcagctggaagatgagacagagcctaaccagttgataccacttcccatcaagata
ccagcgaatactggacaatcctgtcagagaaaaagaacatcacaaaaggtgattgaaatt
actgcaggaggaaaccaaagtattgtcctttacaaggaggaccagagcacccatttggat
ggaattgccactctgaaggataaagaagtggatgcatggatttctaattccagttcgcaa
cactgggaaagtataaaaaagaatatcagcgtgatcttttcatctgaggcttgcatcaat
ggaagcttcctggagaaaagagacaaacatttcaaaacttccaaagaagtctcaggtgta
gacatgtcacaagtgaaatgcttttatgagaagatcagaaagaagcgaaacgtcttccag
aaggtgcaaaaggagattgagaagttactgccatcgttgtcttcctctcccatctcacct
gaaaatttcagagtctacttgatcttgcctttccttctgcagggagagaacgacagctct
taccgttctctccggcttctagcacaagccatcacaaagctccagtcaaaggacctgcaa
actcttgaatgcctgtggtcaaatctagaaacatcatttttaaaggagctggtcattcta
tatcagagggtttcccagaaaaacctatctcagtttataatagaactcatatatgaccaa
agagaccccttcagtctgcgcccacatgaaacagtgactctgcaaatactgcagattctt
taccaggtgaactccagaactggcttgagagtacaagaaaacaacttctatgtgcctgaa
gtgaaaccgattatcataatgttttggtcctttaatatgaaaaacatggccctatggaag
ctgacggaatatccatgcatctttgacatgcaagacaagattaatgttcattctgcagaa
tgcaatgctctgtccagtgtctctacagatacacacataatagcaatgggcaatgaagag
tggttttttccagtcagaagacaatgccttctgcaagacatatggacccatttaaatcgt
gcaacaacccagcaattcaggaagatcttaaaggtgtcgttcgccggcgagcagggcgtg
gacgaaggcgggctgtcgcaggagctcttcagcgtggccgtcaggactctctgccagccc
atcaccggggctttccgccgcgtcgcctccggcctcatgtggctgcccagccaggcgtcg
ggcggtgaggacgcgttgttccggatcgggacgctgtgcgggatggcgctgtataacggg
tgcatagcgcccttctccttcccccgcgctctctacagaaagctgctgggcctggcgccc
actctggaggacctcgaggagctgctgccagacgtgggccggagtcttcaaggaattttg
catgaagaatgcgatcatgtccttgagagcctggacatgaacttcacgataatggaagaa
ggaggttccacaggtgttgttgaacttaaaaaaaatggtgccaacatccctgtcactatg
gataacaggaaagaatttgttgacttgtacgtgaattatgtgttaaatgaatcgatacag
aagccatttgaggccttcatgcaagggtttttaagaggctgcccaggtagaaagtggaag
atgtttctccctgtggagctccagactgttctccagggacacacaaaatatgactggcat
ctgctggaaaagagcgtgatgtatggacggtataaaagtttagataaaaccatcaggaat
ttttggattgtgtttcacaaactcccagaagaaaaaaagaaaatgtttcttgtttttctg
acaggatctgatcgaatctctgcctatgaactggagcattttaagttttgtattgtagat
cctcaagcagaaaatccagatgagctccatcttgttgccaatacctgccaccacattttg
ttcctccccagatacagcagtaaaagaatactcaagaagaagttgctctatgccatagag
cataatgaaagttttggcttgtcctaa
DBGET
integrated database retrieval system
