Strigops habroptila (Kakapo): 115611114
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Entry
115611114 CDS
T08851
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115611114 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115611114 (NDC1)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115611114 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
GP41
Motif
Other DBs
NCBI-GeneID:
115611114
NCBI-ProteinID:
XP_030349364
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Position
8:complement(57412627..57431066)
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AA seq
674 aa
AA seq
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MEPGAGAGRQRALLRQVLGWRVAAAVAWSVLLLPVCTAAFVVLSGLDPFHPVRWISNSFN
DLYTSYVIFCILLMSVVILVVSIFNVEFYAVVPSIPCSRLALIGKIIHPQQVIHSVVHAI
MGMLVAWCAAVMTKGKFQFLAVPCTPSESLDDAVPQMCLNEYHLFFLLSGAFMGYSYSLL
YLINNMNYLPFPIIQQYKYLRFRRSLPLLIKHSCVESLYFVRNFCATYYFFGYIPKVWIS
TTMDLHIDSKLHPLDTLTGLLDLSLFYHAWLCGVFLLITWYIAWLLFKIYATETHHFPVQ
PTFAEETDQCLPKILNSNPPPIIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWAA
ISRECLNLLSDLTQRLITQQEAAAANGRAKQPAGELKIPPQTPGAVATEGMSFQSQRSNI
IPRASMSSMVKSSLMSLKASPGSDVGSPFSSPALNGKMGILDVKSSWHGSAQSPHVMRRG
PKLWTSVTDLHMNGSHHESFPELSAARAGHEAVQPRFIYTWLQNKQEQIKNFLSKRVLIM
YFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDQFGVVQTTLPAILNTLLTLQE
VVDRHFKLPHVSSKPPRVSGSLVDTSYKTLRFALRASLKTALYRITAVFGEHLNAVQVST
EHKKRLQQFLEYKE
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggagcccggggcgggagcgggccggcagcgagcgctgctccggcaggtgctgggctgg
agggtggcggccgccgtcgcctggtccgtgctgctgctgcccgtgtgcaccgcggccttc
gtcgtgctcagcggtctcgaccccttccacccggtgcgctggatctccaattctttcaat
gatttatatacttcctacgtcatcttttgtatcctccttatgtctgtggtgatactagta
gtaagcatcttcaacgttgagttttatgcagtcgtgccatcaataccgtgctctcgatta
gcactgataggaaaaattattcaccctcagcaagttatccattcagttgttcatgctatc
atgggaatgttggttgcttggtgtgctgcagtgatgacaaaagggaagttccagtttctt
gctgtgccctgcacaccttcagagagcctagatgatgctgttcctcagatgtgcctaaat
gagtatcacctcttttttctactttctggagctttcatgggatacagttacagccttttg
tatcttattaacaacatgaattatttgccatttccaatcatacagcaatacaagtacttg
cgtttcagaagatctttgcctctcctcattaaacacagttgtgtggaatcactatatttt
gttagaaacttctgtgccacatattacttttttggttacatcccgaaggtatggataagt
accacaatggatcttcatatagacagtaaattgcatcctcttgacactctgactggctta
ttggatctctccttgttttaccatgcctggttatgtggcgtgtttctcctgattacctgg
tacatcgcatggttactcttcaaaatctatgctacggagacacatcattttcctgtccag
ccaacttttgctgaggagacagaccagtgcctgcctaaaatcttaaacagcaatcctccc
cccattataaagtttttagccttacaagacctgatgttactttcccagtattctcctgtt
cgacgacaagaagtctttagccttagtcagccaggtgggcacccgcacaactgggctgcg
atatcaagggagtgtttgaatcttctgagtgatctgacccagaggctgatcacacagcag
gaagctgcagcagcaaatgggagagcaaagcagccagcaggagagctgaaaatacctccc
cagactccaggagctgttgcaacagaaggcatgtctttccagtcacagagatcgaatatc
attcccagagcttccatgtcttcaatggttaaatcatccctaatgtctttaaaggcatcg
ccggggtctgatgttggttcacctttcagctcacctgctttaaatggcaagatgggaatt
ctggatgtaaaatcttcttggcatggatcagcccaaagtcctcatgttatgaggaggggc
ccaaagctgtggacgtcagttacagatctgcacatgaatggttctcaccacgaatccttc
ccagagctctctgctgcaagagctggccatgaggcagtacagccaagatttatttacaca
tggcttcagaacaagcaagaacagataaaaaacttcttgtcaaaacgagtgctgataatg
tatttcttcagcaagcacccagaagcttccatccaagctgttttctctgatgcccaaatg
cacatctgggctttggaaggtctgtctcatttggtagcagcctcctttactgaggaccaa
tttggagttgtccaaactacactgccagctatcctgaacaccttactgactcttcaggag
gttgtagacagacacttcaaactgcctcatgtttctagcaagcccccccgggtgtcagga
agtctggtggacacatcctacaaaactctacggtttgcacttagagcatctctgaaaaca
gccctgtaccggatcactgctgtctttggagagcacttgaatgcagtgcaggtgtctaca
gaacataagaaaagacttcagcaattcttggaatacaaagaataa
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