KEGG   Strigops habroptila (Kakapo): 115611114
Entry
115611114         CDS       T08851                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
shab  Strigops habroptila (Kakapo)
Pathway
shab03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:shab00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115611114 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shab03019]
    115611114 (NDC1)
Messenger RNA biogenesis [BR:shab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     115611114 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup GP41
Other DBs
NCBI-GeneID: 115611114
NCBI-ProteinID: XP_030349364
LinkDB
Position
8:complement(57412627..57431066)
AA seq 674 aa
MEPGAGAGRQRALLRQVLGWRVAAAVAWSVLLLPVCTAAFVVLSGLDPFHPVRWISNSFN
DLYTSYVIFCILLMSVVILVVSIFNVEFYAVVPSIPCSRLALIGKIIHPQQVIHSVVHAI
MGMLVAWCAAVMTKGKFQFLAVPCTPSESLDDAVPQMCLNEYHLFFLLSGAFMGYSYSLL
YLINNMNYLPFPIIQQYKYLRFRRSLPLLIKHSCVESLYFVRNFCATYYFFGYIPKVWIS
TTMDLHIDSKLHPLDTLTGLLDLSLFYHAWLCGVFLLITWYIAWLLFKIYATETHHFPVQ
PTFAEETDQCLPKILNSNPPPIIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWAA
ISRECLNLLSDLTQRLITQQEAAAANGRAKQPAGELKIPPQTPGAVATEGMSFQSQRSNI
IPRASMSSMVKSSLMSLKASPGSDVGSPFSSPALNGKMGILDVKSSWHGSAQSPHVMRRG
PKLWTSVTDLHMNGSHHESFPELSAARAGHEAVQPRFIYTWLQNKQEQIKNFLSKRVLIM
YFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDQFGVVQTTLPAILNTLLTLQE
VVDRHFKLPHVSSKPPRVSGSLVDTSYKTLRFALRASLKTALYRITAVFGEHLNAVQVST
EHKKRLQQFLEYKE
NT seq 2025 nt   +upstreamnt  +downstreamnt
atggagcccggggcgggagcgggccggcagcgagcgctgctccggcaggtgctgggctgg
agggtggcggccgccgtcgcctggtccgtgctgctgctgcccgtgtgcaccgcggccttc
gtcgtgctcagcggtctcgaccccttccacccggtgcgctggatctccaattctttcaat
gatttatatacttcctacgtcatcttttgtatcctccttatgtctgtggtgatactagta
gtaagcatcttcaacgttgagttttatgcagtcgtgccatcaataccgtgctctcgatta
gcactgataggaaaaattattcaccctcagcaagttatccattcagttgttcatgctatc
atgggaatgttggttgcttggtgtgctgcagtgatgacaaaagggaagttccagtttctt
gctgtgccctgcacaccttcagagagcctagatgatgctgttcctcagatgtgcctaaat
gagtatcacctcttttttctactttctggagctttcatgggatacagttacagccttttg
tatcttattaacaacatgaattatttgccatttccaatcatacagcaatacaagtacttg
cgtttcagaagatctttgcctctcctcattaaacacagttgtgtggaatcactatatttt
gttagaaacttctgtgccacatattacttttttggttacatcccgaaggtatggataagt
accacaatggatcttcatatagacagtaaattgcatcctcttgacactctgactggctta
ttggatctctccttgttttaccatgcctggttatgtggcgtgtttctcctgattacctgg
tacatcgcatggttactcttcaaaatctatgctacggagacacatcattttcctgtccag
ccaacttttgctgaggagacagaccagtgcctgcctaaaatcttaaacagcaatcctccc
cccattataaagtttttagccttacaagacctgatgttactttcccagtattctcctgtt
cgacgacaagaagtctttagccttagtcagccaggtgggcacccgcacaactgggctgcg
atatcaagggagtgtttgaatcttctgagtgatctgacccagaggctgatcacacagcag
gaagctgcagcagcaaatgggagagcaaagcagccagcaggagagctgaaaatacctccc
cagactccaggagctgttgcaacagaaggcatgtctttccagtcacagagatcgaatatc
attcccagagcttccatgtcttcaatggttaaatcatccctaatgtctttaaaggcatcg
ccggggtctgatgttggttcacctttcagctcacctgctttaaatggcaagatgggaatt
ctggatgtaaaatcttcttggcatggatcagcccaaagtcctcatgttatgaggaggggc
ccaaagctgtggacgtcagttacagatctgcacatgaatggttctcaccacgaatccttc
ccagagctctctgctgcaagagctggccatgaggcagtacagccaagatttatttacaca
tggcttcagaacaagcaagaacagataaaaaacttcttgtcaaaacgagtgctgataatg
tatttcttcagcaagcacccagaagcttccatccaagctgttttctctgatgcccaaatg
cacatctgggctttggaaggtctgtctcatttggtagcagcctcctttactgaggaccaa
tttggagttgtccaaactacactgccagctatcctgaacaccttactgactcttcaggag
gttgtagacagacacttcaaactgcctcatgtttctagcaagcccccccgggtgtcagga
agtctggtggacacatcctacaaaactctacggtttgcacttagagcatctctgaaaaca
gccctgtaccggatcactgctgtctttggagagcacttgaatgcagtgcaggtgtctaca
gaacataagaaaagacttcagcaattcttggaatacaaagaataa

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