Strigops habroptila (Kakapo): 115611128
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Entry
115611128 CDS
T08851
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shab03016
]
115611128 (TRMT13)
Enzymes [BR:
shab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
115611128 (TRMT13)
Transfer RNA biogenesis [BR:
shab03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
115611128 (TRMT13)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
OrgC
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
115611128
NCBI-ProteinID:
XP_030349404
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All DBs
Position
8:complement(1026605..1033062)
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AA seq
484 aa
AA seq
DB search
MEEEAVAAGGAGREMAAPEPGRGCPVPGRCAHFVERKKRFCKMVPAPGRRFCGEHGQQEE
ENGRKRIPCPLDPKHTVYEDQLQKHLKKCNSREKPKPVYFVQDINAGLKDVAEIPEKQVP
LSSLSKEELENLITKLKKASNGLEFHLKEQILSHQALQEALNDPKNGESAFKHLKQQASI
LGNMEKLHLLGPGRCFIEFGAGRGKLSHWVDVALQNVENVQFLLVERATTRFKVDGKHQR
RDSIFERLQVDIQHLCLSKVPILEKKKLPVVGIGKHLCGAATDLALRCLVESYTTCCDAE
NEPAPKRSRTDETEVASNNPADNESGKADCKPVAGIVIALCCHHKCDWTHYVGREFFKSV
GLGPVEFHYFQRMSSWATCGMRETTTKGSASEESEEQTNHTEEHEQTFSKMQSGPDTLQG
ILTVEERKEIGCLCKRLIDHGRIEYLQQRGYKAVLQYYIEAAVSLENVLLTAVPSPSLIP
EPTT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggcggtggccgcggggggcgctgggagggaaatggcggcgccggagccg
ggccgcgggtgcccggtgccggggcgttgcgcccacttcgtggagaggaagaagcgcttc
tgcaagatggtcccggctcctgggaggcgtttttgcggggaacacgggcagcaggaggag
gaaaacggcagaaaaaggattccgtgtcctcttgatccaaaacacactgtgtatgaagac
cagctacaaaagcatttaaagaaatgtaattcaagagagaagccaaagccagtctatttt
gttcaagatattaatgcaggtttaaaagatgtagcagaaataccagaaaaacaggtacct
ctctcttctctatccaaagaagagctggagaacttgataactaagttgaaaaaagcaagt
aatggcctggaatttcaccttaaggaacaaatactgtcccaccaggctttacaagaagcc
ttaaatgacccaaagaatggagaatctgctttcaaacacttgaaacagcaggcttctatt
ttaggtaacatggaaaaattacatttgcttggtccaggaagatgttttatcgagtttgga
gctgggcgaggaaagctctctcactgggttgatgttgccttgcagaatgttgaaaatgtt
cagtttttgcttgtggaaagggcaaccacacgatttaaggtggatggaaaacatcaaagg
agagattctatatttgaaaggcttcaagttgatattcaacatttatgtttaagtaaggta
cctattttggagaagaaaaaactaccagtggtaggaattgggaagcatttgtgtggtgct
gcaacagatcttgctttgagatgcttggttgaaagttatacaacttgctgcgatgcagaa
aacgagcctgcaccaaaacgctcgaggactgatgagacagaggtggcttccaacaatcct
gctgataatgaaagcggcaaagctgactgtaagcctgtagctggaattgttattgcgctg
tgttgccatcacaagtgtgactggacacattacgtaggcagagagttctttaaatcagta
ggacttggaccagtagaatttcattattttcagagaatgagtagctgggccacttgtggc
atgcgagaaaccacaaccaaaggctctgcgagtgaagaaagtgaagagcaaactaaccac
acagaagaacatgagcaaacattcagcaagatgcagagtggtcctgatactttacaaggg
atacttacagttgaagaacggaaggagataggctgcctctgtaagcggctcattgatcat
ggacggatcgagtatttacaacaacgaggatacaaggctgtgctacagtattacatagag
gcggccgtgtccttggagaatgtcctgttgacagctgtcccaagtccatctctgatacca
gagccaactacatga
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