Strigops habroptila (Kakapo): 115611190
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Entry
115611190 CDS
T08851
Symbol
RUBCN
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115611190 (RUBCN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115611190 (RUBCN)
Membrane trafficking [BR:
shab04131
]
Autophagy
Other autophagy associated proteins
Others
115611190 (RUBCN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Motif
Other DBs
NCBI-GeneID:
115611190
NCBI-ProteinID:
XP_030349558
LinkDB
All DBs
Position
8:36137992..36169600
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AA seq
1047 aa
AA seq
DB search
MEVGPREGRAESRKEHWKLLGNLKTTVEGLVSTSNPNVWSKYGGLERLCRDMHSILYHGL
IHDKVCCRQKDYWQFVKDIRWLSPGSAHHLEKFISLQESGHPDPEGPEDQAIAQLWLQHS
LQCHCLSAQLRPLLGNRQYIRKFYADTAFLLSDAHVTAMLQCLEAVEQNNPRLLAQIDTS
MLAGTSLPSLCASGPSAGTREMCDHDAEGHESRLPGALGCLDHFTESLLTRRSDGPPLVT
KSQSLTALPASPYIPAAGCVQQRCFGSFSSLHSPASSGLSDRRSASNSVSSSASQPQECC
PSTRSSSFSEGRSPLEQRSSVTHFNVSSPKDPFSPASEMSSSTTSQSEDTWTGSQDDPQS
DVNDGPEYLAIGNSGRRGRACSSASTNSTKSSSSKLFSSSSSQKLDSVSSLGEQGASGGG
SRGLSLLRRSSFSEGQSSATQGVLKKSHVRSHSDTNVASGKLHGGLRDITIIIEDPVAES
HDDPGGRRRPVSASTQSSELNTPSSLYMEYDSGQYLSSGEGMFRRPSEGQSLISYLSEQD
FGSCADLEKENAHFSISESLIAAIELMKCNMMSRQLEEEEEDSDKEIQELKQKIRIRRQQ
IRTRHLFPTCQGMGSDSLVATDSGSQFSSRGSMRLSDSGSAEDVEEYEIRDGNDGSNLIQ
MSKNGLSVSMASLFSDADIKRNPDSSRKSFLSSESISYSFLNSNSAEAVAMGLLKQFEGM
QLPAASELEWLVPEHDAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAPPRPQI
IFNVHPAPTRKVAVAKQNYRCAGCGIRTDPDYIKRLRYCEYLGKYFCQCCHENAQTVIPS
RILRKWDFSKYYVSNFSKDLLSKIWSDPLFNVQDINPALYRKVKSLNQVWLLRIQLFHMK
NMFKTCRLAKDLLDSFDTVPGHLTEDLHLYSLSDLSATKKGDLVPHLTELLKAGSLHVEK
CMLCQAKGFICEFCQNESDIIFPFELNKCSTCEECKACYHKSCFKSTHCPRCERLQARRE
LLAKQSMESYVSDYEEELEQSEVVAAT
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcggtccccgcgaggggcgcgcggagagcagaaaggagcactggaagctacta
ggcaatctgaagaccacagtggaaggtttggtgtccaccagcaacccgaatgtctggtcc
aagtatggcggcttggaacggctctgcagagacatgcacagcatcctctaccatgggctc
atccatgacaaggtgtgctgcagacagaaggattactggcagtttgtgaaggacattcgc
tggctgagtcccggctctgctcatcacctggagaagttcatcagcctgcaggagagtggc
catcctgaccctgagggcccagaggaccaggccattgctcagctgtggctgcagcacagc
ctgcagtgccactgcctgtcagcgcagctgaggccgctcctggggaaccggcagtacatc
aggaaattctacgcagacactgccttcctgctcagtgacgcacacgtcacggccatgctg
cagtgcctggaggctgtcgagcagaacaaccccaggcttctggctcagattgacacctcc
atgctggccggcacgtcactgccatccctgtgcgcatcaggtccttctgctggtacaaga
gagatgtgtgaccacgatgcagaaggacatgagagccgtctgcctggggcgctgggctgc
ctggatcatttcactgagagcctgcttaccaggaggagtgatggtccacctctggtgacc
aagagtcagagcctgactgcccttcccgcatccccatacatccctgctgcaggctgcgtg
cagcagcgctgctttgggtccttctccagcctccactctccagcctcctctggcctctca
gacaggagatcagcaagcaactctgtcagctccagcgccagccagccccaggagtgctgc
ccgtccacccggtcctcctccttcagcgagggcaggtcccctctggagcagcgcagctct
gtcacccacttcaatgtatcctcacccaaagaccccttctctcctgccagcgagatgagc
tccagcaccaccagccagagtgaggacacttggacggggagtcaggatgatccacagagc
gatgttaatgatgggccagagtacctggccattgggaactcagggcgccggggccgagcg
tgcagcagtgctagcaccaacagcaccaagagcagtagctctaaactcttctcctccagc
agctcccagaagctggactcagtctcatccctgggggagcagggggcaagcggaggggga
agcaggggcctgagcctgttgcgccggtccagcttctcggaaggacagtcatcagctaca
cagggcgtcctcaagaagagccacgtacgctcacactctgacaccaacgtggcttcgggg
aagttgcacggaggcctcagggatatcaccattataatagaagatccagtggcagagtcc
cacgatgatccaggtggaaggagaaggccagtctctgcttctacgcagagcagtgaactg
aacacacccagctcgctctacatggagtatgactctggacagtacctgagctcgggggaa
gggatgttcagaagaccctcagaagggcagtccctcatcagctacctctctgagcaggac
tttggcagctgtgcagacctggagaaggagaatgcccacttcagcatctcggagtccctg
atcgctgccattgagctgatgaaatgcaatatgatgagccggcagctggaggaggaggag
gaagacagcgacaaggagatccaggagcttaaacaaaagattcgcattcggcgccagcag
atccgcaccaggcacctgtttcctacctgccaggggatgggctcagacagtcttgtggcg
acagacagcgggtcccagttcagctcccgtggctccatgcgactctctgactctggctct
gcagaggatgtggaagagtacgagatccgagatggtaacgatggatctaacctgattcaa
atgtccaagaacggcctctcagtgtcaatggcttccttgttctcagatgcagacatcaag
aggaacccagactccagcaggaagtcctttctctcctcagagtccatatcctattccttc
ctcaattccaactcggcggaggctgtggccatgggcttgctgaagcagtttgagggcatg
cagctcccggctgcctctgaattggagtggctggtccccgagcatgatgccccacagaag
ctcctacccatccctgactctctgcccatctctcctgatgatggagaacatgccgacatc
tacaagctgaggattcgggtgcgcggaaacctggagtgggcccctccacgaccacagatc
atcttcaatgttcacccagccccaacgaggaaggtggctgtggccaagcagaattaccga
tgcgcaggctgtggcatccggactgatcctgattacatcaagcgactgcggtactgtgag
tatctggggaagtatttctgccagtgctgccatgagaacgcccagacggtcatccccagc
cgcatcctgcgcaagtgggacttcagcaagtactacgtgagcaacttctccaaggaccta
ctgagtaagatctggagtgacccactcttcaatgtgcaggatatcaatcctgccctgtac
cggaaagtgaagtctctcaaccaagtgtggctgctgcgaatccagcttttccacatgaag
aacatgtttaagacatgccgactagctaaagacctccttgactcctttgatacagtgcct
ggccacttgacagaggatttgcacctctactcgctcagtgacctcagtgccacaaagaaa
ggggacctggtgcctcacttgacagagctcctgaaggcaggcagtctgcacgttgagaag
tgcatgctgtgccaagccaaaggcttcatctgcgagttctgccagaatgagagtgacatc
atcttcccctttgagctcaacaagtgcagcacatgtgaagagtgcaaagcctgctaccac
aaatcctgcttcaaatccacccactgtccccgctgtgagcggcttcaagcccggagagag
ctgctggccaagcagagcatggagtcctacgtctcagactacgaagaggagctggagcag
tcggaggtggtggcagccacatga
DBGET
integrated database retrieval system
