Strigops habroptila (Kakapo): 115611234
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Entry
115611234 CDS
T08851
Symbol
PTBP2
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shab03041
]
115611234 (PTBP2)
Spliceosome [BR:
shab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115611234 (PTBP2)
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_NFXL1
Motif
Other DBs
NCBI-GeneID:
115611234
NCBI-ProteinID:
XP_030349685
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Position
8:complement(2205595..2252146)
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AA seq
537 aa
AA seq
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MDGIVTDVAVGVKRGSDELLSGSVLNSPNSNMSSMVVTANGNDTKKFKGDDKMDGAPSRV
LHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPH
LRNQLIYIQYSNHKELKTDNTLNQRAQAVLQAVTAVQATNAPISGTTVSESAVTPAQSPV
LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDG
QNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSL
LGLPVAAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSL
FTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMSHLNGQKMYGKIIRVTLSKHQTV
QLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLF
ANTGGTVKAFKFFQRDHKMALLQMSTVEEAIQALIDLHNYNLGENHHLRVSFSKSTI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtcactgatgttgcagttggtgtgaagagaggatctgacgaacttctt
tcaggcagtgtactcaatagcccgaactctaacatgagcagcatggtagttactgcaaat
ggtaatgacaccaagaaattcaaaggggacgataaaatggatggggctccttctcgtgtt
cttcatatcaggaaactgcctggggaagtgacagaaacagaagttattgctttaggttta
ccttttggtaaggtgaccaacatcctgatgctgaaagggaaaaatcaggcatttttggaa
cttgccacagaagaagcagctatcactatggtgaattactactctgctgtgacgcctcat
cttcggaaccaacttatctatatccagtattccaatcataaagaactgaagactgataac
acacttaaccagcgggcccaagctgttcttcaggcagtgacagctgtgcaggcaacaaat
gctcccattagtgggaccactgttagtgagagtgcagtgactccagctcagagtccagta
cttagaataatcattgacaatatgtactatccagtaaccctggatgttcttcatcagata
ttctctaaatttggtgctgtattgaagataatcacattcacaaagaataaccagtttcaa
gctttactgcagtatggtgatccagtaaatgcacagcaagcaaaactagccttagatggt
caaaatatttataatgcttgctgtaccctacggattgatttttccaaactggtgaatttg
aatgtcaagtacaacaacgataaaagcagggactacactcgtcctgatcttccatctggt
gatggacagccagcgctggacccagctattgctgcagcatttgcaaaggagacctctctt
ctagggcttcctgttgcagctgttccaggagctctgagtcctttggctattcccaatgct
gctgctgcagctgcagctgctgctgccggccgggtgggaatgcctggagtttccgctggt
ggcaatacagttctcctggttagcaatttaaatgaagagatggttacgccccaaagtctg
tttaccctcttcggtgtttatggtgatgtgcagcgtgtgaagattttatacaataagaaa
gatagtgctcttatacagatggctgatggaaaccagtcacagctggccatgagccatctt
aatggacaaaaaatgtacggcaagattattcgggttaccctttctaaacatcagacagta
caactacctcgagagggacttgatgaccaagggctgacaaaggattttggtaattcacct
ctgcatcgcttcaagaaacctggttcaaaaaacttccaaaatatattccctccttctgca
acacttcatctgtccaatattccaccctcggtagcagaagaggatctacgcacattgttt
gctaacactggaggcactgtgaaagcgtttaaattctttcaaagagatcacaagatggca
cttcttcagatgtcaacagtagaagaagctattcaagctttgattgatcttcacaattac
aatctgggagaaaatcaccatctgagagtttccttctcgaagtcaaccatttaa
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