Strigops habroptila (Kakapo): 115611274
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Entry
115611274 CDS
T08851
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115611274 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shab01009
]
115611274 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115611274 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
shab03029
]
115611274 (RB1CC1)
Protein phosphatases and associated proteins [BR:
shab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115611274 (RB1CC1)
Membrane trafficking [BR:
shab04131
]
Autophagy
Autophagosome formation proteins
ULK complex
115611274 (RB1CC1)
Mitochondrial biogenesis [BR:
shab03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
115611274 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
DUF5959
Motif
Other DBs
NCBI-GeneID:
115611274
NCBI-ProteinID:
XP_030349867
UniProt:
A0A672TRT7
LinkDB
All DBs
Position
1:40653211..40712913
Genome browser
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIDDIKLKLTHLGSAVSIMAKIPLLECLTRHSYRECLGRLDSSAEHGGAESEETEDGKSP
ELVLDSDISKVNNKSMLASFCKSVEHSALEGTDPENVKDDKESGQNATVQDNETSVELKD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSAATPRMES
TTGTAIATSSRTPPSLSLQGPLCPPVCPPAPLEDLSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSR
RMQDTSSGVKDVSAENASLSVCMEKCRVIAQDSKVHLRGIKEDLCHFRTLVQREQCDFSN
SLKCTSLEIVNTIEKVKLSLEKTLKDKHQKELQSLKTEYETKINKLLEDGEENEKKIKKL
KGDLLGLEEVIQNKNDEFAMVKNEKEAVVCLQNEKDQKLLELECQMETQNCEIKELRQSR
EIVLEDLKKLHVENSEKLQLLRAELESLEQSHLKELESNLQARHLQEFEKMLAEHKDCLD
KLKKENQHRLEQMQESHAIVVQEKQQQVEELQLKVSDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQQQETLKSQIDKETESLKKEIDKLNHKIQISSDEYQVGLSELRTLMTIEKDQ
CISELVDRYEEESNLLRTELNKVTLLHQKTSEAEKRLSEQITELQSKLELEVNALEKEKT
EKLSLCEQQEKYEAIIHKLKEEKELLVSNQEQDRQLLIQKLNCEKEDAVQTACKEFELQR
EAAEKGLLEKIQQLEMQVNRSPPTESSAESSLVAELKEKLQEEKMKFLEQLEEQEKRKNE
EMQNIRISLTAEQQTNFNTVLAREKMKKENIINDLSDKLKVLTQQQEKDKDLIETLSEDR
ARLLEEKKKLEEEVNKLRSSNFSPSTYSAAASEPCGACAADTPTDTDRLVSDIAAEGRMD
STMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttttggtcaacactggaactacccttacctttgatacggaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaacaaagtataagattgccatt
cagcaccaagtactggttgtcaatggaggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagataccaacccaatatttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagctatccccaaaactacattttcagcagagaatgagatggaattg
aaagtagaagaatctctcatgatgcctgcagtgtttcatacggtagcgtcgcggacacaa
cttgcagtggaaatgtatgaggttgccaagaaactttgctccttttgtgaaggtcttgta
catgatgaacatcttcagcatcaaggctgggctgccataatggccaacttggaagattgt
acatactcttaccaaaaactccttttcaagtttgaaaatgtatattcaagctatttgcag
tccatagatgatatcaagttgaaacttacacacttgggttctgctgtttctataatggcc
aagataccactgctggagtgcctaacaagacatagttacagagagtgtttaggaagactg
gattcttctgctgagcatggaggggcagaaagtgaagaaacagaggacgggaaatctcct
gaattggtgcttgattctgatatatctaaagtgaacaataaatcaatgttagcctcattt
tgcaagtcagttgaacattcagctttggaaggcacagatcctgaaaatgtgaaagatgat
aaggaatctggtcaaaatgctactgtccaggacaatgaaacatcagtagaattgaaagat
gatgatcagccttctttcaatgtatctttattagactggataaatgttcaagatagacct
aatgatgttgaatcgctggtcagaaaatgttttgattctatgagcaggcttgatccaagg
atcatccaaccctttctggcagaatgtcgccaaactattgccaaactagataatcagaac
atgaaggctattaaaggcctcgaggataggctctatgcattagaccagatgatagcaagc
tgcagcagactggtgaatgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgctgcctgatctgtgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacagaaaactgttagatattaaacagaaatgtacc
actgccaaacaggagcttgcaaataatctacaagtcagactgaagtggtgttgttttgta
atgcttcatgctgaccaagatggagagaaactgcaagcattgcttcgtcttgtaacagag
ctcctagaaagggtcaaggttgtagaggctctcagtactgttcctcaaatgtactgcctg
gctgttgttgaggttgtgaggagaaaaatgttcataaaacactacagggagtgggcaggt
gctttaataaaagatgggaaacacctgtatgaagctgaaaaggcaaaaagggaatctttt
ggtaaactgttcaggaagtcttttctaaggaatcgtttgtttagaggacttgactcctgg
cctccatccttttgtacacgaaaacctcgcagatttgacagtgagcttcccgatatctca
ttaagtgacttgcagtttttgcagtctttttgtccttcagaagtacagccattactcagg
gttcccatactttgtgactttgaacctcttcaccagcatgtacgagctctacataacctg
gtaaaggcagcacagagtttggatgaaatgtcacaaactattacagacctgctgaatgaa
caaaaggcctccaatagccaagcatcaccacaatctgctgccacaccaaggatggaaagt
acaacaggaactgcaattgctacctcttcaagaactcctccatcactcagtcttcagggt
cccctgtgtcctcctgtgtgtcccccagctccattagaagacttgtctcctgacagcatt
gatgcgcatacatttgattttgaaactatagcccatccaaacttggagcaggctcttaag
caaggatcattagacttggattcattagcagaaagtccagaatctgacttcatgtcagca
gtaaatgaatttgtaatagaagaaaatccagtatctcctaacgtaataagtgatccccaa
agtccagaaatgatggtggaatctctttattcttcagttatcaatgcaatagacagtaga
cgtatgcaagatacaagttctggagtaaaggatgtttcagcagaaaatgcatctctcagt
gtttgcatggagaagtgtagggttattgcccaagattcaaaggtacatttaagaggtata
aaagaagatctttgccactttagaacactcgtacaaagagaacagtgtgacttttctaat
tctttaaaatgcacttcattagaaatagtaaatactattgagaaggtaaaactctcactt
gaaaaaacactaaaagataaacatcaaaaagaattacagtctttgaaaactgaatatgaa
actaaaattaataaattattggaggatggtgaagaaaatgaaaagaagattaaaaagtta
aaaggtgacttactaggccttgaggaagttattcagaataagaatgatgaatttgcaatg
gtgaaaaatgagaaagaagctgtagtttgccttcagaatgagaaagaccagaaattactg
gaattggaatgccaaatggagacacaaaattgtgaaattaaggaactgagacagtcacgt
gagatagtacttgaagacttgaaaaaacttcatgttgaaaacagtgaaaaactacaactc
ctgagggcagaacttgagagcttagagcaaagccatttaaaagaactggaaagcaaccta
caagccaggcatttacaggaatttgagaaaatgctagctgagcacaaggactgtttagat
aaactaaaaaaagagaatcagcatagacttgaacaaatgcaggaatctcatgcaatagtt
gtgcaagagaaacaacaacaagtcgaagagttgcaactcaaggtttcagatctgtccgat
ttgaggtgcaaattagaagttgaacttgccctgaaagaggcagaaactgatgaaatgaag
cttctgttggaagaaagcagaaaccagcaacaagagacattaaaatctcagattgataag
gaaaccgaaagcttaaaaaaggagatagataaattaaaccacaaaatacaaattagtagt
gatgagtatcaagtgggcttgtcggaactaaggactctgatgacaattgagaaagaccag
tgcatttctgagctagtcgacagatacgaagaagaatccaatttgcttagaactgaacta
aataaagtaacacttcttcatcagaaaacttctgaggcagaaaaaagactttcagagcaa
ataacagaactacaaagtaagttagagttggaagtgaatgccctagaaaaggaaaaaaca
gaaaaattgtcgctctgtgagcagcaggaaaaatatgaagctattatccataagcttaag
gaagagaaagaactgttagtatctaaccaagaacaagacaggcagttgctcattcagaag
ctcaattgtgaaaaagaggatgcagtacaaactgcttgtaaagagtttgaattacagagg
gaagctgctgaaaaagggcttttggaaaaaatacagcaacttgagatgcaagtaaatcgg
agtcctccaactgaatcatctgctgaatcgagcttggttgctgaacttaaagagaagctt
caggaagaaaaaatgaagttcctagagcaacttgaagaacaagagaaaagaaagaatgaa
gaaatgcagaatatcagaatatcactcactgcagaacagcagaccaacttcaacaccgtt
ctggcaagagagaaaatgaaaaaagaaaacataattaatgatcttagtgataaattaaaa
gtgcttacacaacagcaagaaaaagataaggatttgattgaaacactttctgaagatcga
gctcgcttacttgaagagaagaaaaagcttgaagaagaagttaataaactgagaagtagt
aatttttctccatcaacttactcagcggcagcttcagaaccttgtggagcctgcgcagct
gatactcccactgacactgacagattggtttctgacattgcagctgaagggagaatggac
tccacaatggaaaccagtatgatggctgtacatgaaaatgtccatatgtctgaagaaaaa
cagaggataatgttgttagaaagaactttacagttgaaagaagaggaaaataagagatta
aatcaaagattgatgtcccagagtatgtcatcagtatcctcaagacattctgaaaaaata
gcaattagagatttccaagttggcgatttggttctcattatcttggatgaaaggcatgac
aactacgtattatttactgttagtccaaccttgtatttcctgcactcagaatctctggct
gcattggatctcaaaccaggtgagtgtgcttcaggtgcatctaggagaccttgggtacta
ggaaaagtgatggaaaaggaatattgccaggcaaaaaaggcacaaaacagatttaaagtt
cctttgggtacgaagttctacagagtgaaagcagtaccatggaacaagaaagtataa
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integrated database retrieval system
