Strigops habroptila (Kakapo): 115611292
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Entry
115611292 CDS
T08851
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115611292 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115611292 (SMG7)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
115611292 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
115611292 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
115611292
NCBI-ProteinID:
XP_030349860
LinkDB
All DBs
Position
8:complement(39382436..39434404)
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AA seq
1189 aa
AA seq
DB search
MSLLCAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEV
KTQWSVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVI
NLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYP
LPAVKVSMDWLKLRPSVFQEAVVDERRYIWPWLISLLNSFQPHEEDLSSNNATPLPEEFE
LQGFLALRPSFRNLDFSKGHQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEV
GRLLFLTEIPELLLEDPSEAKESLALQETSIAEPLSTDGSPGLKSVLSSGRSLNNNCDAG
EKPMVTFKENIKPREMNREQGRIYPPKDVGRERRDYNKGIVANKNDGKKDNNKRKNETKK
CGLDKMQEAGKQNVAVQVKSQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPP
LPSRPGFPPPTYVVPPPVAFSMSTGYTFPGGVSVPGTFLQPTAHSPAGNQVQGGKQSHIP
YSQQRPSGPGPMTQGPQQTPPPSQQPLSSLPAQATAQSTSQLQVQALAQQQSPTKAVQGL
GKSPPHHSGFQQYPQTDSSKQLWNPPQVQGSLGKIMPVKQSYYLQAQDPLKLFEQSLQPP
VMQQQPLEKKMKPFPMEPYNQNPSEVKVPEYYWDSSYGMADNRVMAQQSNMDRRGKRQGV
FRPEQDSVSRMTFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPG
RSLFKSLLEKPSELMSQSSSFLSFSGFSLNQERYPNNSMFNEVYGKNMNTSTKLEVTPSV
AHQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSIPFSNFG
PIGTPDNRDRRVADRWKTDKPAMGGFGLDYLPATSSSSESSWHQTSAPSGTWAAQGPPAM
EDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgtgtgcgcagtatctccggcaggcagaagtcctgaaggctgacatgaca
gattcaaagctgggtccagcagaagtctggacatccagacaagctctacaggatttatat
cagaaaatgctagtgaccgatttggaatacgctttagataaaaaagtggagcaggacctt
tggaatcatgcctttaaaaatcagatcacgacgctacagggtcaggcgaaaaacagagca
aatccaaatcggagtgaagttcaggcaaacctttctctgttcttagaggcagctagtggc
ttctacacacagttattacaggaactgtgcacagtttttaatgtagacttgccatgtcgt
gtaaagtcttcccagctgggaatcattagcaataaacagacgcacaccagcgccatagtc
aagccgcagtctagctcctgctcttacatctgccagcactgccttgttcaccttggagat
attgctcgctataggaatcagaccagccaggcagagtcttactatagacatgcagctcag
cttgtcccatctaacggtcagccttataatcagttggctattctagcttcctccaaagga
gaccacttgaccacaattttctactactgcagaagcattgctgtgaagtttcctttccca
gctgcctccactaacctacaaaaagcactttctaaagcactggagagtcgtgatgaggtg
aagactcaatggagcgtgtctgacttcatcaaggcatttattaagttccatggccatgtg
tacctgagtaagagcttggagaagctgagccctcttcgagaaaagctggaagaacaattc
aagaggttgttattccaaaaggccttcaattcccagcagttagtacatattactgttatc
aatctgtttcaactacatcacctgcgagacttcagcaatgaaacggagcagcacagctac
agccaggatgagcagctctgctggacacagttactggctctcttcatgtcctttcttgga
gttctgtgcaagtgtcctttacaaaatgactaccaggaggactctggggctgcatatcct
cttccagctgtgaaggtttcgatggactggctgaaacttaggcccagtgttttccaggag
gcagtggttgatgaaagacggtacatatggccctggcttatttcgcttctaaacagcttc
cagcctcatgaagaagatctatccagtaataatgcaaccccccttccagaagaatttgaa
ttgcaaggattcttggctctgaggccttcattcaggaacttggatttttccaaaggccac
caggcaattacaggagataaggaagggcaacaacgtcggatacggcaacagcgtctgatc
ttcacaggcaaatggattgctgataaccagccaaggttgattcagtgtgaaaatgaggta
ggaaggctgctgtttttgacagaaatcccggaactattattagaggaccctagtgaagcc
aaagagagtctcgccttgcaggaaacatctattgcagagccgctatctacagacgggagc
cctggactcaaatcagttctgtcttctggaagaagcctgaacaacaactgtgacgcagga
gaaaaaccgatggtcacattcaaggagaacatcaagccacgggaaatgaacagagagcaa
gggcgaatctatccccctaaagatgtaggtagggaaagacgggactataacaaaggaata
gtagctaataagaatgatggaaagaaggataacaataaaagaaagaatgagaccaagaaa
tgcggcttggataagatgcaggaagcaggaaagcagaacgtggcagttcaggtgaagtcc
cagacagagatgaggaagactccagtgtctgaggcaaggaaaacacctgtaactcagact
ccaagtcaggccagcagttctcagttcatccccattcatcacccaggagccttccctccc
cttcctagccggccagggtttccacccccaacctatgttgtccccccacctgtggctttc
tccatgagcacggggtacaccttcccaggtggtgtttctgtcccaggaaccttccttcag
cccacagctcactcgcctgcaggaaaccaggtgcaaggtgggaaacagtcccacattcct
tacagccagcaacggccctctggaccagggccaatgacccagggacctcagcaaacacca
cctccttcccagcagcccctctcatctttaccagctcaggcaacagcacagtccacaagc
cagttacaggtccaagcgctggcccagcaacagtcccctacgaaagctgtgcagggtctg
gggaagagcccaccacaccactccggattccagcagtatccacagacggactcgtcaaag
cagctctggaacccgcctcaagtccaaggctcactggggaaaatcatgcctgtaaagcag
tcctattacctgcaggcccaggaccctctaaaattatttgaacagtcattacagcctcct
gtgatgcaacagcaacctctggagaaaaaaatgaagcctttcccaatggagccatataac
cagaatccctcagaagtcaaggtgccagaatattactgggactcttcctatggcatggct
gacaatagggtgatggcacagcagtctaacatggaccgcaggggaaaacggcaaggagtc
ttccgcccagagcaggattctgtctccaggatgacctttgaggaccccaagagctcccct
ctgcttcctccggacctgttaaagagtctggctgccttggaggaggaggaagagctgatt
ttctctaatcctcctgatctttacccagctctgctggggcctctcgcctctcttcctgga
cgaagcctctttaagtccctgctggaaaaaccatcagaactgatgtctcagtcgtcgtct
ttcctgtccttcagtggcttttctcttaatcaggaaagatacccaaataacagcatgttc
aatgaggtatatgggaaaaacatgaataccagcacaaaactagaagtcaccccttcagtt
gctcatcaggagacttcactatattctctctttgaagggacaccgtggtctccatccctt
ccagccagctcagatcattcgacaccagccagccagtctcctcactcctccaaccccagc
agcttgccaagctcccctccaacccataaccacaattctattcccttctccaacttcgga
cctattgggactccagacaacagagacaggagagttgcagaccgctggaaaacagataag
ccagcaatgggagggtttggcctggactaccttccagcaacatcctcgtcttcggagagc
agctggcaccagaccagcgctcccagtggcacctgggcagcccaaggccctcctgctatg
gaggactcctcagctgtgcttatggagagcctgaagtccatctggtccagttccatgatg
caccctggaccctcagccctggagcagctgttaatgcagcagaagcagaagcagcaacgt
ggacaaggcaccatgaacccgccgcattga
DBGET
integrated database retrieval system
