Strigops habroptila (Kakapo): 115611315
Help
Entry
115611315 CDS
T08851
Symbol
USP24
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shab01002
]
115611315 (USP24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shab04121
]
115611315 (USP24)
Enzymes [BR:
shab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115611315 (USP24)
Peptidases and inhibitors [BR:
shab01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115611315 (USP24)
Ubiquitin system [BR:
shab04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115611315 (USP24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
UBA
UBA_7
ubiquitin
Motif
Other DBs
NCBI-GeneID:
115611315
NCBI-ProteinID:
XP_030349903
LinkDB
All DBs
Position
8:complement(57685422..57751257)
Genome browser
AA seq
2599 aa
AA seq
DB search
MESEEEQHMTTLLCMGFSDAAAIRKALRLAKNDINEAVALLTNERPGLHYGGYEPMESGQ
GPPGGHGSPAGGQGPRGGDGDSGGGGGGGGFDPPPAYHEVVETEKNDENGNCSGEGIEFP
TTNLYELESRVLTDHWSIPYKREESLGKCLIASTYLARLGLSDSDENCKRFMDRCMPEAF
KKLLTSSAVHKWGTEIHEGIYNMLMLLVDLVAERVKQDPIPVGLLGVLTMAFNPDNEYHF
KNRMKVCQRNWAEVFGEGNMHAVSPISTFQKEPHGWLVDLVNRFAELGGFSAIQSKLNSE
DIELGAISALVQPFGVCAEYLNSSVVQPMLDPVIHKMIKYVQNVEEKDLKDKRLVSIPEL
LSGIKLLCMRFQPDLVTAVDDLRLDILLRMLKSPHFSAKMNSLKEVTKLIEDSTVSKSVK
NAIDTDRLLNWLVENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELTKIWRIQSG
QSSTVIENIHTIIAAAAVKFSSDQLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARV
ETTTGKVLEVLWELAHLPTLPCSLIQQALEEHLTILSDAYAVKEAIKRSYIIKCIEDIKR
SSQHNNPQFVWVVPALRQLHEITRSFIKQTYQKQDKSIIQDLKKNFEIVKLVTGSLISCH
RLAASVAGPGGLVGATLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWNRAREIWECLVT
GQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGFSLFKTFFENVN
LCDHRLKRQGTQLSVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINYSYINLTPRLKK
DSVSLHKKFIADCYTRLEAASSALGGPTLTHAVTRATKMLTATAMPTVATSVQSPYRSTK
LVIIERLLLLAERYVITIEDLYSVPRTILPHGASFHGHLLTLNVTYESTKDTFTIEAHSN
ETVGSVRWKIAKMLNSPVDNIQIFANDSLLTVNKDQKLLHQLGFSDEQVLTVKTSGSGTP
SGSSADSSASSSNTGSVFSSSYAMEQEKSLPGVVMALVCNVFDMLYQLANLEEPRITLRV
RKLLLLIPTDPAIQEALDQLDSLGRKKTLLSESSSQSSKSPSLSSKHQHQPSASSILESL
FRSFAPGMSTFRVLYNLEVLSSKLMPTADDEMARNCAKSFCENFLRAGGLSLVVNVMQRD
SIPSEVDYETRQGVYSICLQLARFLLVGQTMPTLLDEDFIKDGVEALSSRPFRNVSRQAS
RQMSICGTPEKSSYRQLSVSDRSSIRVEEIIPAARVAIQTMEVNDFTSTVACFMRLSWAA
AAGRLDLVGSSQPIKESNSLFPAGIRNRLSSSGSNCSSGSEGEPTALHAGICVRQQSVST
KDALIAGEALSLLVTCLQLRSQQLGSFYNLPCVADFIIDILLGSPSAEIRRVACDQLYTL
SQTDTSAHPDVQKPNQFLLSVVLGAQLPLWSPTSIMRGINQRLLSQCTEYFDLRCQLLDD
LTSSEMEQLKISPAAMLEDEITWLDNFEPNRTAECETSEADNILLAGHLRLIKTLLSLCG
AEKEMVGSSLIKPLLDDFLFRASRIILNSHSPAGSAAISQQDFHPKCSTADSRLAAYEVL
VMLADSSPSNLQLITKELLSMHHQCDPALTKEFDYLPPVDSRSISGFVGLKNGGATCYMN
AVFQQLYMQPGLPEALLSIDDDTDNPDDNVFYQVQSLFGHLMESKLQYYVPENFWKIFKM
WNKELYVREQQDAYEFFTSLIDQMDEYLKKIGRDQIFKNTFQGIFSDQKICKDCPHRYER
EEAFMALNLGVTSCQSLEISLDQFVRGEVLEGSNAYYCEKCKEKRTTVKRTCIKVLPSLL
VIHLMRFGFDWESGRSIKYDEQIRFPWMLNMEPYTVSGMARQDSSSEVGDNGRNADQGGG
GSPRKKVAPTENYELVGVIVHSGQAHAGHYYSFIKDRRGCGKGKWYKFNDTVVEEFDLTD
ETLEYECFGGEYRPKVYDQSNPYPDVRRRYWNAYMLFYQRVSDQNSPVLPKKSRVSVVRQ
EAEDLSLSAPSSPEISPQSSPRPHRPNSDRLSILTKLVRKGEKKGLFVEKMPVRIYQMVR
DENLKFMKNRDVYSSDYFSFVLSLASLNATKVKHPYYPCMAKVSLQLAVQFLFQTYLRTK
KKLRADTEEWIATIDALLSKSIDACQWLVEYFVGPEGRELVKTFLLECSVREVRVAVATI
LEKTLDSALLYQEKLKTLHQLLEVLLALLDKDVPENCKNCAQYFLLFNNFVQKQGIRASS
LLLRHSALRHMINFLLGPNRQSNQNRRWSSAQAREFGYLHNTVALLVLHSDVSSQRNVAP
GLFKQRPPLSITASGPLLTLHEEVEALLFLSEGKPYLMEVMYALRELTGSLSVLIEMVVY
CCFCNEHFSFTVLHFIKTQLETAPPHELKNIFQLLHEILVIEDPLQVERIKFAFETENGL
IALMHHSNHVDSSRCYQCVKFLVTLAQKCPTAKDYFKENSHHWSWAVQWLQKKMSEHYWA
PQSNVSNETSTAKTFQRTISAQDTLAYATALLNEKDQSGSSNGSESSPANENGERHLQQG
SESPMMIGEPKSDLDDVDP
NT seq
7800 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgaggaggagcagcacatgaccacgctgctctgcatgggcttctcggacgcg
gccgccatccgcaaggcccttcgcctggccaagaacgacatcaacgaggccgtggctctg
ctcaccaacgagcggcccggcctccactacggcggctatgagcccatggagagcgggcag
ggcccgccgggcgggcacggctcacccgccggcgggcagggcccccgcggcggcgacggg
gacagcggcggcggcggcggtggaggaggctttgacccgccgcccgcttaccacgaagtg
gtggagaccgagaaaaatgacgaaaatgggaattgctctggtgaaggtattgagtttcca
acaactaacttgtatgaactggagagcagagttctgacagatcactggtccataccctat
aagcgtgaggagtctctaggcaagtgcctgattgcatccacctacctggcaaggctaggt
ctttctgattctgatgagaattgcaagagatttatggacagatgcatgcctgaagcgttt
aaaaagttgttgacatccagtgctgttcacaaatggggaacagaaatccatgaaggaata
tacaacatgcttatgctgctagtggacctggttgcagaaagagtaaaacaagatcctatt
cctgtgggcctcctcggtgtacttacaatggcatttaaccccgacaatgagtatcatttc
aagaaccgaatgaaggtgtgccagagaaactgggcagaagtcttcggggaggggaacatg
catgctgtctcacccatatccacttttcagaaggaacctcatggctggctggtggatctc
gtaaacaggtttgcagagttgggtggattttcagcaattcagtccaaactcaattcagaa
gatattgaacttggggcaatctctgcgttagttcaaccatttggagtttgtgcagaatat
cttaactcttctgtagtacagcccatgctggatccagtcattcataaaatgattaaatat
gtgcagaatgtagaagagaaggacttgaaagacaagagactagtcagtatccctgagctc
ttgtctggtatcaaactgctgtgtatgcgcttccaacccgatttggtaacagcggtagat
gacttacggctggacattctgttgcgcatgttaaaatctcctcacttcagtgcaaaaatg
aattccctcaaggaagtaacgaaattaatagaagacagcactgtatccaagtctgtgaag
aatgcgatagatacagaccggttactaaactggctggtagaaaactctgtcctgtccatt
gctctagaaggtaatatagaccaagcacaatactgtgatcgtataaagggaattattgaa
ctgctgggcagtaaattatctctagatgagctcactaaaatctggagaattcagtcggga
caatcctccactgtgattgaaaacatacataccattattgctgcagctgctgtgaagttt
agctctgatcagctgaatcatttatttgttctaatccaaaagagctgggaaacagagagt
gatagagtgcggcagaagctgttgagcctgatagggcgcattggtcgagaagcacgggtg
gagacaaccactggaaaggttctggaggtgctttgggagctggctcatcttccaacatta
ccatgtagtcttattcagcaggctttggaggaacatttgacaatcctcagtgatgcctac
gcagtgaaagaggcaatcaaaagaagctacatcatcaaatgcatagaggatattaagagg
tcatcccagcacaataatcctcagtttgtgtgggtggtgccagcattacgtcagctccat
gaaatcacacgttcatttattaagcaaacttaccaaaagcaagacaagagcattattcaa
gatttaaagaaaaactttgaaatagtgaagctggtgacaggaagcttaatatcatgccac
cgtttggctgcatctgtggcaggtccaggaggacttgttggagcaacattagtggatggc
cgatacacttaccgggagtatttggaagcacatctaaaatttttggcattttttctgcaa
gaagccaccctttacttgggctggaatcgtgccagggagatctgggagtgccttgtaact
ggccaggatgtttgtgagttagatagagagatgtgctttgagtggtttacaaaaggacag
catgatctagagagtgatgtacagcaacagctcttcaaagagaaaattcttaaactggag
tcatatgaaattactatgaatggttttagtttatttaagactttctttgaaaatgtgaac
ctatgtgaccatcgactaaagaggcaaggaactcagttgagtgtggaaaaactggaatta
atcggaatggatttcatttggaagattgcaatggagtcacctgatgaagaaattgccaat
gaagctattcaattgataataaattacagctatattaatctaactcctagattgaaaaag
gattcagtatcactgcacaagaaattcattgctgattgctacacacgattagaggcagcc
agctctgcacttggaggtccaacgttaacacatgctgttacaagagctacaaaaatgctt
acagcaactgctatgcctacagtagcaacctcagttcagtctccttacaggtcaactaaa
cttgtaataattgagagactgctgctgttggcagagcgttatgtgataacaatagaggac
ctttactctgttcctcgaactattctacctcatggtgcctctttccatggacatctttta
acacttaatgttacatatgagtctaccaaagatactttcaccatagaggcacatagcaat
gaaactgtagggagcgtcaggtggaagatagcaaagatgttgaattcacctgtggataat
atacagatatttgccaatgacagcctgctaactgtaaacaaagatcagaaactactccac
caactgggcttctctgatgaacaagtccttacagtaaaaacatcaggaagtgggactcca
tcagggagctctgcagattcctcagccagttccagcaacaccggcagtgtgttcagttca
tcctacgcaatggaacaggagaaatccctccctggagtagtcatggctcttgtgtgtaat
gtgtttgatatgctttaccagcttgccaatctagaggagccaaggataacactacgagtg
aggaaacttctgctcttgattcccactgacccagctattcaggaggctcttgatcagctt
gattccctgggaaggaagaaaacactcctatcagaatcaagttctcagtcttccaaatca
ccatccttgtcttcaaaacaccaacatcagcccagtgctagttcaatactagaaagtctt
ttcagatcttttgctccgggcatgtccaccttcagagtgctctacaatttagaggtactg
agctccaagctgatgccaactgcagatgatgaaatggcaagaaactgtgccaagtctttc
tgtgaaaacttcctcagagcaggagggttgagtttggtggtgaatgtgatgcagagagat
tccatcccatcagaagtagactatgaaacaagacagggagtctattccatctgcctgcaa
cttgcaaggttcttgcttgttggccagacaatgcctaccttactggatgaggatttcatt
aaagatggggtagaagcattgtcctcacgccccttccgtaatgtcagccgacaagcaagt
aggcagatgtccatttgtggaacacctgagaagtcatcctaccgacagctctctgtgtct
gatagatcctccattagggtagaagaaatcataccagcagcgagagttgccatacaaact
atggaggtgaatgatttcacttccacagtggcttgcttcatgaggctctcttgggctgct
gctgcaggacgactggatcttgtgggaagtagtcagccaataaaagaaagcaacagttta
tttcctgctgggattcgaaatagacttagcagctcaggaagtaattgcagttcaggaagc
gaaggagagccgactgcgctgcatgctggtatctgtgtgcggcagcagtctgtatccacc
aaagatgctctgattgctggagaagccttgtccctcttagtaacttgccttcagctacgc
agtcagcaactaggatctttttacaatttgccttgcgttgctgatttcatcattgacata
ctgcttggatcaccaagtgctgagattcgtcgtgttgcctgtgaccagttgtacaccctt
agtcagacagacacatctgctcacccagatgtacaaaagccaaaccagtttctcctgagt
gttgttcttggtgcccagctgcctctttggtcaccaaccagcatcatgagaggaatcaac
cagagacttttgtcccagtgtacagaatattttgacctgagatgtcagttattggatgac
ctcacatcatccgaaatggaacagctaaagataagcccagctgccatgttagaagatgag
atcacctggctagacaactttgaacccaaccgcacagctgagtgtgagaccagtgaagcc
gataacatcctgttagcaggacacttgaggctcatcaagactctcctttcactctgtggg
gcagagaaggaaatggttggttcatctttgattaagccattgttggatgatttcctcttc
cgagcatccaggatcattctgaatagccattctccagcaggcagtgctgcaattagccag
caagactttcatccaaagtgcagcacagcagatagccgattagctgcttatgaagtgtta
gtaatgctggctgatagctcaccttccaatctccagcttattacaaaagagctgctttct
atgcatcaccagtgtgaccctgcacttaccaaggagtttgattatcttccaccagtggat
agtcgttccatttcaggatttgtgggcctgaagaatggtggtgctacttgttacatgaat
gccgtcttccagcagctatatatgcaaccaggtcttccagaggctttgctttccattgat
gatgatacagacaatccagatgacaatgtgttctatcaagttcaatctctttttggtcat
ttgatggaaagcaagctacagtattatgtacctgagaacttctggaagattttcaagatg
tggaataaggaactttatgttagagagcaacaggatgcttatgagttcttcaccagtctt
atagatcaaatggacgagtacctcaagaaaataggaagagaccaaatatttaagaatact
tttcaaggaatcttctctgatcagaagatctgcaaggactgtcctcacaggtatgagcgt
gaggaagccttcatggctctcaacctgggtgtgacttcatgtcaaagtctggaaatatca
ttggatcagtttgttagaggagaagttctggaaggaagcaatgcatactactgtgaaaag
tgcaaagaaaagagaactacagtgaagcgcacatgcattaaggtcttacctagcctgttg
gtgattcacctgatgagatttggctttgactgggagagtggacgttctattaaatacgat
gagcaaataaggtttccctggatgctgaacatggaaccttacactgtgtcagggatggct
cgccaggactcgtcctccgaagtgggggacaatggtagaaacgcagatcaaggaggaggg
ggctccccaaggaagaaagttgcccctacagaaaactatgagcttgttggtgtgatcgtt
cacagtggccaggcacacgcagggcactactactcctttataaaggacagaaggggctgt
ggaaaaggaaagtggtataaatttaatgacactgttgttgaagaatttgatttaactgat
gaaaccctggagtatgaatgttttggtggagagtatagacctaaagtctatgatcaatct
aacccttaccctgatgtgcgtcggcgctactggaatgcctatatgctgttttaccagaga
gtgtctgatcagaactctccagtcttaccaaagaaaagtcgagtgagtgttgtgcgtcag
gaagccgaggacctctcattgtctgctccatcttcaccagaaatctcaccccagtcatca
cctcgaccccataggcccaacagtgaccgcctctccatcttgactaagctggttcgaaaa
ggagagaaaaaggggctttttgtagagaaaatgcctgtgcggatatatcagatggtgaga
gatgaaaacttgaaatttatgaaaaacagagatgtatacagtagtgactacttcagtttt
gtgctgtcattagcttcactgaatgctactaaggtaaagcatccttattatccatgcatg
gcaaaggtgagcttacagctggcagtccagttcctcttccaaacctatctccgaaccaag
aagaaactcagggctgatacagaagaatggattgccaccatagatgcgctgctctccaaa
agcattgatgcttgtcagtggttagttgaatatttcgtcgggccagagggccgggagctt
gtaaaaactttcctcctggaatgcagtgtgagagaggtgcgagttgctgtagccactatt
cttgaaaaaaccctcgacagtgccttgctttatcaggagaagttaaaaactctacatcaa
ttattggaggtgctacttgctctactggataaagatgtacccgaaaactgtaaaaactgt
gctcagtactttttgctattcaataactttgtacagaagcagggtataagggctagcagt
cttcttctcagacactctgctttgaggcacatgatcaacttcctccttggccccaaccgg
cagagtaatcagaatcgcaggtggagttcagcacaagcgcgtgagtttggatatcttcac
aatactgtagcactacttgttttgcactctgacgtctcctcacaaagaaatgttgctcct
ggtctctttaagcagcgtccacctctaagcatcaccgcttcaggtccgcttttgacactc
catgaagaagtggaagccttgttattcctgtctgagggaaaaccctacttaatggaggtg
atgtatgcattacgagagctaactggatctctctcagttctcattgagatggtggtgtac
tgctgcttttgtaatgagcacttttcctttactgtgctacacttcatcaagactcagcta
gaaactgctccacctcatgaactgaaaaacatattccagttactccatgagatactggtt
attgaagacccattgcaagtggagcgcatcaaatttgcctttgaaactgaaaatggatta
atagccttgatgcaccacagcaaccacgtggacagcagtcgttgttaccagtgtgtcaag
tttcttgttactttggctcagaagtgccctactgcaaaagattacttcaaggagaattcc
caccattggagttgggctgtgcagtggctacagaagaagatgtctgaacattattgggct
ccacagagtaacgtatccaatgaaacatcaactgcaaaaaccttccagcgcactatttca
gcacaggacaccctggcctatgccacagccttgctaaacgagaaggatcagtctggaagc
agtaatgggtcagaaagtagtccagccaacgagaacggggagaggcatctgcagcagggc
tcagagtctcctatgatgattggtgagcctaaaagtgaccttgatgatgttgacccataa
DBGET
integrated database retrieval system
