Strigops habroptila (Kakapo): 115611462
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Entry
115611462 CDS
T08851
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115611462 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shab04147
]
115611462 (COPB2)
Membrane trafficking [BR:
shab04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
115611462 (COPB2)
Exosome [BR:
shab04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
115611462 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
115611462
NCBI-ProteinID:
XP_030350299
UniProt:
A0A672U4B8
LinkDB
All DBs
Position
8:6482027..6498601
Genome browser
AA seq
913 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVAAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAE
KDGKNNVAFMSYFLQGKLDSCLELLIKTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVAEEYVKQSLADLRPAREYPLVTPNEERNLLEEAK
GFEPSGVMASQRKAEEPAPPPKQDVMKTVLQNSDLLPMKDQKTLLDLEDDLDNLDLEDID
TTDINLDEEILDE
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagacttgatataaaacggaagctaacagctcggtctgaccgggtgaagagt
gtagacttgcatcccacggaaccatggatgttggctagcctttacaatggcagtgtctgt
gtttggaaccatgaaacacagactctggtgaagacgtttgaagtgtgtgacctgccagtg
agagctgccaaattcgtggcaaggaagaactgggttgttacaggagctgatgacatgcaa
atcagagtttttaattataacaccttggaaagagttcacatgtttgaagcccattcagat
tacattcgttgcattgctgtgcatcccacacagcctttcatactgacaagcagcgatgac
atgctcattaaactctgggactgggataaaaaatggtcttgttctcaggtgtttgaagga
cacacccattatgtcatgcagattgtcataaacccaaaagacaataatcagtttgccagt
gcctctctggataggacaatcaaggtgtggcagcttggctcttcttcacccaactttact
ttggaaggccatgagaaaggagtgaactgcattgactattacagtggaggagacaaacca
tatctcatttcaggtgcagatgaccggttggttaagatctgggactaccagaacaaaacc
tgtgtgcagacactggaaggacacgctcagaatgtgtcttgtgtcagcttccatcctgaa
ttgcctatcattatcacaggctcagaagatggaactgtgcgcatttggcattcaagcact
taccgcctggaaagtaccctcaactacggcatggagagagtgtggtgtgtggccagttta
agaggatccaataatgtggctttggggtatgatgaaggcagcattattgttaagcttggt
cgtgaagaacctgccatgtccatggatgcaaatggaaagattatttgggctaagcattca
gaggtccaacaggccaacttgaaagctatgggagatgctgaaatcaaagatggagaaagg
ttaccactggctgtaaaggacatggggagctgtgaaatctatcctcagacaattcagcac
aaccccaatggacggtttgtagtagtgtgcggtgatggtgaatacatcatctacacagcc
atggctttgagaaacaagagctttgggtctgcacaggagttcgtgtgggcacatgattct
tcagaatacgcaatcagggagagcaacagtgttgtaaagatatttaaaaacttcaaagag
aagaagtcattcaaacctgattttggagcagaaggcatctacggtggcttcctgttgggg
gtcagatctgttaatggtttggcattctatgattgggaaaacacagaattgattcgcagg
attgaaattcagcctaaacatattttttggtctgactcgggtgagcttgtctgcattgct
acagaagagtcattcttcattctgaaatacctatcagaaaaagttgcagcagcccaagaa
acacatgaaggtgtcactgaagatggaattgaagatgcttttgaggttcttggtgagatc
caggagattgtgaaaacaggcttgtgggtaggcgactgctttatttacaccagttctgtg
aacagactcaactactatgttggaggagaaattgtcaccattgcccatttagacagaaca
atgtatcttttggggtatatcccgaaggacaaccgactttatttgggtgataaagagcta
aacattgttagctactctttgctggtctcagtgcttgagtatcaaacggctgtgatgaga
agagatttcagtatggctgacaaagtcctgcccaccattccgaaagaacagagaaccaga
gttgcacattttcttgaaaaacagggcttcaaacaacaagctcttgcagtatccacagat
ccagagcatcgttttgaacttgctcttcaacttggagaattgaaaatagcgtatcagctt
gcagtggaagcagagtcagaacagaaatggaaacaacttgctgagcttgccattagtaaa
tgccagtttggcttagcccaggagtgtctccaccatgcacaagactacggaggactgctg
ctgctggctacagcttcaggaaacgctaacatggtgaataagttagctgaaggagcagaa
aaggatggcaagaataatgtggcatttatgagctacttcctgcagggaaagcttgactcg
tgtttggaactcctcattaaaaccgggcgcctcccagaagctgcttttcttgcacggaca
tatttgccaagccaagtttcaagggtggttaaactgtggcgggagaatctctctaaagtc
aatcagaaagctgctgagtccctcgctgatcctacagagtatgagaatcttttccctgga
ctaaaggaagcttttgttgctgaggagtacgttaaacaaagcctcgctgacttgcggccg
gccagggaatatccccttgtcactccaaatgaagaaagaaacttacttgaagaagcgaaa
ggatttgagccttcgggagtaatggcatctcagaggaaggctgaagaaccagctccacct
cctaaacaagatgtgatgaagacagttttgcagaattctgatctacttccaatgaaagat
caaaagaccctgcttgacttggaagatgacttggataacttggacctggaggatattgat
accacagacatcaatctggacgaagagatcttagatgagtga
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