KEGG   Strigops habroptila (Kakapo): 115611496
Entry
115611496         CDS       T08851                                 
Symbol
PTCH2
Name
(RefSeq) LOW QUALITY PROTEIN: protein patched homolog 2
  KO
K11101  patched 2
Organism
shab  Strigops habroptila (Kakapo)
Pathway
shab04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:shab00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    115611496 (PTCH2)
SSDB
Motif
Pfam: Sterol-sensing TRA2_N Patched
Other DBs
NCBI-GeneID: 115611496
NCBI-ProteinID: XP_030350368
LinkDB
Position
8:complement(52260310..52282268)
AA seq 1435 aa
MGAAAAAAANGSGGGGAAPAPPAPXLPFRGAAGGGRHRALRTDTAPLRHRHLRPRRAHGG
RRARPHITGLPSPASRPAMPAEPPRAAPPPLRAARRKPLTEGRAVGQRAPQWLRARFQAL
LFALGCRIQRHCGKVLFVGLLVFGALAVGLRVASIETDIEHLWVEAGSRVSQELRYTKEK
LGEESVYTSQMLIQTPKRDGENILTQEALQLHLEAALAASKVQVSLYGKSWDLNKICYKS
GVPIIENGMIERMIEKLFPCVILTPLDCFWEGSKLQGGSAYLPGRPDIQWSNLDPLQLME
ELGQFTSLEGFKELLDKAEVGQAYMERPCLDPRDPQCPPSAPNKQSQQSPDIPAELSGGC
HGFSRKFMRWQQELILGGTTKDSQGKLLRAEALQTMFLLMSPRQLFEHFKDDYEIHDISW
SEEKAGAILEAWQRKFVELAQDSIPPNATQSVHAFSTTTLNDIMKSFSDVSAIRVAGGYL
LMLAYACVTMLRWDCSKSQGAVGLAGVLLVALSVASGLGLCSLLGISFNAATTQVLPFLA
LGIGVDDMFLLAHAFTETSHHIPFKERTGECLKRTGTSVALTSVSNMIAFFMAALVPIPA
LRAFSLQAAVVVVFNFAMVLFVFPAILSLDLYRREKRRLDILCCFYSPCSSRVIQIQPQE
LADANDNHACHPSPYGHPGVATSTQITTTVQAFTRCDPSGHHVVTVLPPTSQVCTSPAVL
LPPTDPMGSQVFAPSSSTRDLLAQMDEAKSGRECVPLPFCRWSLADFAREKYAPLLLRTR
SKVVVAVLFLALLGLSLYGTTMVHDGLYLTDIVPRDTKAHAFISAQFKYFSFYNMFIVTK
GGFHYPGAQAALLSLHQAFSTVKYVVREGNRDLPKMWLHYFQDWLRGLQATFDRDWQAGR
ITHDSYRNGSEDGALAYKLLIQTGNKKEPFNFNQLTTRRLVDENGIIPPDTFYICLTVWA
SNDPLGFAASQANFYPPPPEWIHDKYDTTGENLRIPAAQPLEFAQFPFYLSGLRRTADFV
EAIESVRAICREAAQRHGVLSYPSGYPFLFWEQYIGLRHWFLLAISILLACTFLVCALLL
LNPWTAGIIVSILAMMAVELFGIMGLMGIKLSAIPVVILIASVGIGVEFTVHVALGFLTA
VGSRNVRSAAALEHTFAPVMDGAVSTLLGVLMLAGSEFDFIMRYFFAVLTILTLLGLLNG
LVLLPVVLSVIGPPPEASLVDNSPRLPPSEPVPPCLGPGGLYVRRSPAWPATFPDPSDTE
HYTEAMGPGSPRGPFVVPPTPAHILLEAGKDPSFPRITVLKPYKDSPEIQGKKEAPSPQP
APPLSFGEPCPVPPREHPQPCPPGAQPVAPGALPAYSTHLQGPAGTYTTVTATASVTVAL
HPTLPGSYPSFIPEGFTSSERDCLEEPSMPSTSSTTMPDTFEMQSMGCHGAGARR
NT seq 4308 nt   +upstreamnt  +downstreamnt
atgggcgctgccgcggcggcggcggccaatgggagcggcggcggcggcgcggccccggcg
ccccccgcccccngcctcccctttagaggcgcggcgggcggcgggcggcacagagcgctc
cgcaccgacaccgcgccgctccgccaccggcacctccggccccgccgcgcgcatgggggc
cgccgcgctcggccccacataacggggttgcccagccccgccagtcgccccgccatgccg
gcagagcccccccgcgccgcgccgccgccgctccgcgccgcccgccgcaagccgctgacc
gagggcagggccgtgggccaaagggccccgcagtggctgcgggcccgctttcaggcgctg
ctcttcgccctgggctgccggatccagcggcactgcgggaaggtgctcttcgtggggctg
ctggtgttcggggcgctggccgtggggctgcgggtggcctccatcgagaccgacatcgag
cacctctgggtggaagcgggcagccgggtgagccaggagctacgctacaccaaggagaag
cttggcgaggagtccgtctacacctcccagatgttgatccagaccccaaagagggatggg
gagaacatcctgacgcaggaggccctgcagctccacctcgaggcggccctggccgccagc
aaagtccaagtctcgctgtacggaaaatcgtgggatttgaacaagatctgctacaagtca
ggtgtccccattattgagaatggcatgatcgagaggatgatagagaagctgttcccctgc
gtgatcctgacaccgctggactgcttctgggaaggctccaagctgcagggaggctcagcc
tacctcccgggccgcccggacatccagtggagcaacctggaccctctgcagctgatggag
gagctggggcagttcacatccctggaaggcttcaaagagctgctggacaaggcagaggtg
gggcaggcttacatggagcggccctgcctggacccccgtgacccccagtgccccccaagt
gcccccaacaagcagagccagcagagccctgacatcccagccgagctctcagggggctgc
cacggcttctccaggaagttcatgcgctggcagcaggagctgattttaggcggcacgacc
aaagactcccagggcaagctgctacgcgccgaggccctgcagaccatgttcctcctcatg
agcccccggcagctcttcgagcacttcaaggatgactacgagatccatgacatcagctgg
agcgaagagaaggcgggtgccatcctggaagcctggcagaggaaattcgtggagctggca
caggactccatcccacccaatgccacgcagagcgtccacgctttctccaccaccacactc
aacgacatcatgaagtccttctccgacgtcagcgccatccgggtggccgggggctacctc
ctcatgctggcctatgcctgtgtcaccatgctgcggtgggactgctccaagtcccaaggg
gctgtgggcctggctggagtcctgcttgtggctctctccgtggcctctggcctggggctc
tgctcgttgctgggcatctccttcaacgcagccaccacccaggtcctgcccttcctggcc
cttggcatcggtgtggatgacatgttcctcttggctcacgccttcactgagaccagccac
cacatccccttcaaggagcgaacaggcgagtgcctgaagcgcacagggaccagcgtggct
ctcacctctgtcagcaacatgattgccttcttcatggcagccctggtgcccatccctgcc
ctacgtgccttctccctccaggctgcggtggttgtggtgttcaacttcgccatggtgctg
tttgtcttccccgccatcctgagcctggacctgtaccgccgggagaaacgtcggctcgac
atcctctgctgcttctacagcccttgctcctcacgggtcatccagatccaaccccaggag
cttgctgacgccaatgacaaccacgcctgccacccatccccttatggtcaccctggtgtg
gccaccagcacccagatcaccaccaccgtacaagccttcacccggtgcgacccctcgggc
caccacgtcgtcaccgtcctgccacccacctcacaagtgtgcacctcgcccgctgtcctc
ctgccccccaccgaccccatgggctcgcaggtcttcgccccatccagctccacgcgggac
ctgctggcccagatggatgaggctaagagtggaagggaatgtgttcccctgcccttctgc
cgctggagcctggctgactttgcccgggagaagtacgccccgctcctcctgcggacccgg
agcaaggtggtggtggcggtgctgttcctggcgctgctagggctgagcctctacggcacc
accatggtgcacgatgggctctacctgacggacatcgtgccacgggacaccaaggcacat
gccttcatctcagcacagttcaagtacttctccttctacaacatgttcatcgtcaccaag
ggtggcttccactaccccggtgcccaagctgccctgctcagcctgcaccaggccttcagc
accgtcaagtatgtggtgcgggagggcaaccgtgacctgcccaagatgtggctccattac
ttccaggactggctcagagggctccaggccacctttgacagggactggcaagccgggcgc
atcacccacgacagctaccgcaatggctccgaggacggggcactggcgtacaagctccta
atccagactggcaacaagaaggagcccttcaacttcaatcagctgaccacgcgacggctg
gtggacgagaacggcatcatcccccccgacaccttctacatctgcctgacggtgtgggcc
agcaatgaccctctgggcttcgctgcctcccaggccaacttctacccaccaccccccgag
tggatccatgacaagtacgacaccacgggcgagaacctgcgaatccctgcagcccagccg
ctggagttcgcccagttccctttctacctgagcgggctgcgtcgcacggctgacttcgtg
gaggcgattgagagtgtccgtgccatctgccgagaggctgcccagcgccacggggtgctg
agctaccccagcgggtaccccttcctcttctgggagcagtacattggcctgcgccactgg
ttcctgctggccatcagcatcctgctggcctgcaccttcctcgtctgcgccctgctgctg
ctcaacccctggacggctggcatcatcgtctccatcctggccatgatggcagtggagctg
tttggcatcatggggctgatgggcatcaagctgagcgccatccccgtggtcatcctcatt
gcctcggtgggcatcggtgtggagttcaccgtccatgtggcgctgggcttcctgacagcc
gtggggagcaggaacgtgcgctcggccgcagcactggagcacaccttcgcccctgtgatg
gatggtgctgtttccaccctcctgggtgtcctcatgttggctggctctgagtttgacttc
atcatgaggtacttctttgcagtgctcaccatcctgacactgctggggctgctcaacggg
ctggtgctgctgccagtcgtgctctccgtcatcgggccaccccctgaggcatcgctggtg
gataacagcccccgcctgcctccatcggagccagtgcccccatgcctgggccctgggggt
ctctatgtccggcgttccccagcctggcctgccaccttccctgacccctcggacacagag
cactacacagaggccatggggccggggagcccacggggacccttcgttgtgcccccaacc
ccggcacacatcctgctggaggctggcaaggaccccagcttcccccgcatcaccgtgctg
aagccctacaaggacagcccagaaatccagggaaagaaggaggctcccagcccgcagcca
gcacccccgttgtcctttggggagccgtgtcctgtgccaccccgagagcacccgcagccc
tgcccgccaggtgcccagccagtggcccccggagccctgcctgcctacagcacccatctg
cagggccccgctggcacctacaccaccgtcacagccaccgcttcagtgacagtggccctg
caccccacgctgcccggctcctaccccagcttcatccctgagggcttcaccagcagcgag
cgggactgcctggaagagcccagcatgcccagcaccagcagcaccaccatgcctgacacc
ttcgagatgcagagcatgggatgccacggggcaggcgctcggcgctag

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