Strigops habroptila (Kakapo): 115611530
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Entry
115611530 CDS
T08851
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03030
DNA replication
shab03410
Base excision repair
shab03420
Nucleotide excision repair
shab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115611530 (RFC4)
03410 Base excision repair
115611530 (RFC4)
03420 Nucleotide excision repair
115611530 (RFC4)
03430 Mismatch repair
115611530 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shab03032
]
115611530 (RFC4)
03036 Chromosome and associated proteins [BR:
shab03036
]
115611530 (RFC4)
03400 DNA repair and recombination proteins [BR:
shab03400
]
115611530 (RFC4)
DNA replication proteins [BR:
shab03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
115611530 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
115611530 (RFC4)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
115611530 (RFC4)
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
115611530 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
115611530 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_assoc_2
Rad17
AAA_30
AAA_16
AAA_22
AAA_11
DUF815
Mg_chelatase
AAA_24
AAA_14
SLFN-g3_helicase
AAA_28
RuvB_N
AAA_19
TIP49_C
AAA_5
DNAX_ATPase_lid
AAA_3
bpMoxR
AAA_7
ResIII
CH_2
Motif
Other DBs
NCBI-GeneID:
115611530
NCBI-ProteinID:
XP_030350436
UniProt:
A0A672UTZ5
LinkDB
All DBs
Position
8:34560651..34575167
Genome browser
AA seq
365 aa
AA seq
DB search
MQAFLKGPSAISTKPLAAKERGAAGAAGSSGEGKRPKPIPWVEKYRPKNVDEVAFQDEVV
AVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVI
REKVKAFAQLTASGSRSDGKVCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLI
CNYISRIIEPLTSRCSKFRFKPLSDKIQQQRLLDVSEKEQVKISNEAVSYLVKVSEGDLR
KAITFLQSATRLMGGKEITEKIVTEIAGVIPREKIDELLSVCWSASFEKLETLAKNLINE
GYAVAQLVSQLHDAVVESENYSDKQKSVIVEKLAEVDKCLADGADEYLQLVSLCAVVMQQ
LTQNS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccttcctcaagggcccatctgccatcagcaccaagcccctcgctgccaaggag
aggggtgcggccggcgcagcgggcagcagcggggagggcaagaggcccaaacccatcccc
tgggtggagaaatatcgccccaaaaatgtggatgaagttgccttccaggatgaagttgtt
gctgtgctgaaaaagtccttggaaggtgctgatcttcccaatctgttgttctatggccca
cctggaactggaaagacttccactattttagcagctgctagagaactctatgggcctgaa
ttattccggcaaagagtccttgagttaaatgcctctgatgagcgtggaatccaagtaatt
cgggaaaaagtgaaggcttttgctcagcttactgcatctggaagccgttcagatggtaaa
gtttgtcctccttttaaaattgtaatcctggatgaagcagactcaatgacttcagcagct
caggcagccttaagacgcacaatggagaaggaatctaaaacaacacgtttctgccttatt
tgtaactacatcagcagaataattgaacctttaacatctcgatgctccaaattccgcttc
aagcctttatcagacaaaatccaacagcagaggctgttggatgtttctgagaaggaacaa
gtgaaaatcagtaatgaggcagtgtcgtaccttgttaaagtgtcggaaggggacttaaga
aaagcaattacttttcttcaaagtgccactcgcctaatgggtgggaaagagatcacagag
aagatagtcactgaaattgctggggtcatccctagagaaaaaattgatgaactgctgtct
gtctgctggagtgcttcatttgagaaactggaaacactggcaaagaatctcataaatgaa
gggtatgctgttgctcagcttgtaagccagctgcatgatgctgttgttgagagtgaaaat
tacagtgacaagcagaaatctgtcatagtcgagaaacttgcggaagtagataaatgtttg
gcagatggtgcagatgaatacttgcagctggtgagtctctgtgctgtggtgatgcagcag
ctaacacagaactcttaa
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integrated database retrieval system