KEGG   Strigops habroptila (Kakapo): 115611530
Entry
115611530         CDS       T08851                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
shab  Strigops habroptila (Kakapo)
Pathway
shab03030  DNA replication
shab03410  Base excision repair
shab03420  Nucleotide excision repair
shab03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:shab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    115611530 (RFC4)
   03410 Base excision repair
    115611530 (RFC4)
   03420 Nucleotide excision repair
    115611530 (RFC4)
   03430 Mismatch repair
    115611530 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shab03032]
    115611530 (RFC4)
   03036 Chromosome and associated proteins [BR:shab03036]
    115611530 (RFC4)
   03400 DNA repair and recombination proteins [BR:shab03400]
    115611530 (RFC4)
DNA replication proteins [BR:shab03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    115611530 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    115611530 (RFC4)
Chromosome and associated proteins [BR:shab03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    115611530 (RFC4)
DNA repair and recombination proteins [BR:shab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     115611530 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    115611530 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_assoc_2 Rad17 AAA_30 AAA_16 AAA_22 AAA_11 DUF815 Mg_chelatase AAA_24 AAA_14 SLFN-g3_helicase AAA_28 RuvB_N AAA_19 TIP49_C AAA_5 DNAX_ATPase_lid AAA_3 bpMoxR AAA_7 ResIII CH_2
Other DBs
NCBI-GeneID: 115611530
NCBI-ProteinID: XP_030350436
UniProt: A0A672UTZ5
LinkDB
Position
8:34560651..34575167
AA seq 365 aa
MQAFLKGPSAISTKPLAAKERGAAGAAGSSGEGKRPKPIPWVEKYRPKNVDEVAFQDEVV
AVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVI
REKVKAFAQLTASGSRSDGKVCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLI
CNYISRIIEPLTSRCSKFRFKPLSDKIQQQRLLDVSEKEQVKISNEAVSYLVKVSEGDLR
KAITFLQSATRLMGGKEITEKIVTEIAGVIPREKIDELLSVCWSASFEKLETLAKNLINE
GYAVAQLVSQLHDAVVESENYSDKQKSVIVEKLAEVDKCLADGADEYLQLVSLCAVVMQQ
LTQNS
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgcaggccttcctcaagggcccatctgccatcagcaccaagcccctcgctgccaaggag
aggggtgcggccggcgcagcgggcagcagcggggagggcaagaggcccaaacccatcccc
tgggtggagaaatatcgccccaaaaatgtggatgaagttgccttccaggatgaagttgtt
gctgtgctgaaaaagtccttggaaggtgctgatcttcccaatctgttgttctatggccca
cctggaactggaaagacttccactattttagcagctgctagagaactctatgggcctgaa
ttattccggcaaagagtccttgagttaaatgcctctgatgagcgtggaatccaagtaatt
cgggaaaaagtgaaggcttttgctcagcttactgcatctggaagccgttcagatggtaaa
gtttgtcctccttttaaaattgtaatcctggatgaagcagactcaatgacttcagcagct
caggcagccttaagacgcacaatggagaaggaatctaaaacaacacgtttctgccttatt
tgtaactacatcagcagaataattgaacctttaacatctcgatgctccaaattccgcttc
aagcctttatcagacaaaatccaacagcagaggctgttggatgtttctgagaaggaacaa
gtgaaaatcagtaatgaggcagtgtcgtaccttgttaaagtgtcggaaggggacttaaga
aaagcaattacttttcttcaaagtgccactcgcctaatgggtgggaaagagatcacagag
aagatagtcactgaaattgctggggtcatccctagagaaaaaattgatgaactgctgtct
gtctgctggagtgcttcatttgagaaactggaaacactggcaaagaatctcataaatgaa
gggtatgctgttgctcagcttgtaagccagctgcatgatgctgttgttgagagtgaaaat
tacagtgacaagcagaaatctgtcatagtcgagaaacttgcggaagtagataaatgtttg
gcagatggtgcagatgaatacttgcagctggtgagtctctgtgctgtggtgatgcagcag
ctaacacagaactcttaa

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