Strigops habroptila (Kakapo): 115611560
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Entry
115611560 CDS
T08851
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115611560 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shab04121
]
115611560 (TRIP12)
Enzymes [BR:
shab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115611560 (TRIP12)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
HECT type E3
115611560 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
115611560
NCBI-ProteinID:
XP_030350532
UniProt:
A0A672V5Y0
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All DBs
Position
8:complement(20323275..20403892)
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AA seq
2066 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTSEQSKGHFSRRGCSSSAGLIPQQEDPERVSTSEKQKTGQVPKKDNSRGVKRSASPD
YRRTNSPSSAKKPKALQHSETSLETNKPHTKSKRRHLDQEQPKSAQLPSTSKAHTRKGGA
AGSSRSQKRKRTEDLSCIKGGSAVESTGAEEKSAKLSKLASKSVTSAKAGCSTITDSSSS
ASTSSSSSAVASASSTVPQGARVKQGKDQSKARRSRSASSPSPRRSSRDKEQSKTGGSSK
FDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPS
LRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEAPQG
AAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGS
GASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEH
NFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRH
SKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTH
QDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVR
MFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICE
LMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDE
ISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHSELKKDDARAQLMKE
DPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSH
IASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKV
CTNGSGTLSTTTTISTGTATAASNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLP
KRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPAR
TAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLCTA
TEQLNLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKCEKDAVSRDIRL
KRFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTG
SSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRG
YGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQY
SLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDCVGGKRGRAQTAPTKT
SPRNSKKHDELWHDGVCPSVLNPLEVYLISAPPENITFEDPSLDVILLLRVLHAISRYWY
YLYDNAICKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDT
RQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNRDELLKQAESVM
QDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEG
TKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWM
LRQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQTKESLQYALEALTMNGCS
VEDLGLDFTLPGFPNIELKKGGKDTPVTIHNLEEYLRLVIFWALNEGVARQFDSFRDGFE
SVFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSF
DSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLP
DYSTIEIMREKLLIAAREGQQSFHLS
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccagccgcaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacacttttctagaagaggctgtagttcatct
gctggcttaataccacaacaagaagatccggagagagtcagtacttcagaaaagcaaaaa
acggggcaagtgcctaagaaagacaattctcgaggagttaaacgcagtgctagtccagat
tacaggaggaccaattctcctagctctgctaaaaaacccaaagcacttcaacacagtgaa
acttccttggaaactaacaagccacatactaaatctaagagaaggcacttagaccaagaa
cagccaaagtctgcacaattgccatcaacaagcaaggctcacaccaggaagggtggagct
gctggtagctcccgaagtcagaaaaggaaaaggacagaggatctgtcttgtataaagggt
ggttcagcagttgaatcaactggtgctgaagagaagtcagcaaaactctccaagctggct
tcaaaatcggtgacctcagccaaagctgggtgtagcaccatcactgattcttcttcttca
gcttccacatcctcctcctcttctgctgttgcctctgcttcttctactgttcctcagggt
gccagggtgaaacagggaaaggaccagagtaaagctagacgttcccgttctgcatccagc
cccagtccgagaaggagtagcagagacaaagaacagagtaaaacaggtggctcttcaaag
tttgactgggctgctcgattcagcccaaaagtcagtctccctaaaacaaaactgtctcta
ccaggctcttccaagtcagagacatcaaaacctggaccttcaggactacaggctaagcta
gcaagtctaagaaaatctacaaagaagcgcagtgaatcaccacctgctgagctccccagt
ttgcggcggagcacacggcaaaagaccacgggctcctgtgctagcaccagtcggcgaggc
tctggcctgggcaaaagaggagcagctgaagctcgccgacaggagaagatggctgatcct
gacaacaaccaggatggagttaactcttcagctgcgcgtacggatgaggctccccaggga
gctgcagcttctagttctgttgctggggctgtaggtatgacaacctctggagaaagtgag
tctgatgattctgagatgggaagactacaagctctattagaggctaggggtcttcctcct
cacctgtttggccctcttggtcctcggatgtcgcagctcttccacaggacaattggaagt
ggagctagttctaaagcccagcagcttttacaaggtctccaagccactgacgaaagtcag
caactccaggcagtgattgagatgtgccagctgttggtaatgggaaatgaagaaacatta
ggaggatttccagtcaagagtgttgtaccagctttgataacactgctgcagatggagcac
aactttgacattatgaaccatgcatgtcgggccttaacatatatgatggaagcacttccc
aggtcatctgctgtagtggtagatgcaattcctgtcttcttagaaaagctgcaagttatt
cagtgcattgatgtggcagagcaggcgcttacagctttggagatgttatcacgcaggcat
agtaaagccattctgcaggcaggtgggttggcagactgtttgctgtatctggagttcttc
agtataaatgcgcagaggaatgcactagctattgctgccaactgctgccagagtataaca
cctgatgagtttcactttgtggcagactctttgccactgcttacacaaaggttaacccat
caggacaaaaagtctgttgagagcacttgtctctgttttgcacggctagtggacaacttc
cagcatgaggagaacttgctccagcaggttgcttccaaggacttgttaacaaatatccag
caactcttggtagtgacgcctcctatcctgagctcaggaatgttcatcatggtggtgcgc
atgttttccttaatgtgctccaattgccctactcttgcagtccaacttatgaagcaaaat
attgcagaaacgcttcacttcctcctttgtggagcctcaaatgggagttgtcaagaacaa
attgacctggttccacgaagtcctcaagagctttatgagcttacttctcttatctgtgaa
ctgatgccttgcctaccgaaagagggcatctttgctgttgatactatgctgaagaaagga
aatgcgcaaaatacagacggtgcaatatggcagtggcgagatgacaggggcctctggcat
ccctataacaggattgatagtcgaataatagaggcagctcatcaggttggtgaggatgag
ataagcctgtctacacttgggcgtgtctacactattgattttaactctatgcagcaaata
aatgaagatactggaacagcacgtgccattcagcgaaaaccaaaccctttagccaatacc
aacactagtggacattcagaattgaagaaggatgatgcccgagcacagctaatgaaagaa
gacccagaactggcaaaatcctttatcaaaacactgtttggtgttctttatgaagtatat
agttcttcagctggacctgctgttagacacaagtgccttagagcaattcttaggataatt
tattttgctgatgctgaacttctgaaggatgtgctgaaaaaccatgctgtttcgagtcat
attgcctccatgctgtcaagtcaagaccttaagatagtagttggagccctgcagatggca
gagattttaatgcaaaagttacctgacatttttagtgtttacttcaggagagaaggggtg
atgcaccaagtgaaaaacttggcagagtctgaggctttgctaacaagcccaccaaaagta
tgcactaatggatcaggaacactcagtaccactacaacaataagtactggaacagccact
gctgccagtaatgcagctgcagatttgggctctcctagcttacagcacagcagggaggat
tctttggatctgagcccacaaggacgactgagtgatgttctaaagagaaaaagactgcca
aaacgagggccaaggagaccaaaatactcccctccaagagatgatgataaagtagacaat
caagctaaaagccctacaactactcagtctcctaaatcttctttcttggcaagcttaaat
cctaaaacatggggaagattaagcacacagtccaacagtaataatattgaaccagcacga
acagcaggagtaagtggtcttgcaagggctgcttccaaggataccatttccaataacaga
gaaaaaatcaagggctggattaaggagcaagcccataaatttgtagaacgttattttagt
tctgaaaacatggatggaagcaatcctgcactaaatgtgttacagagactttgcactgca
actgaacaactcaacctccaggtggatggtggaacagagtgccttgtagaaatccgtagc
attgtctcggagtctgacgtctcctcatttgaaatccagcatagtgggtttgttaaacaa
ctgctgctttatttgacatctaaatgtgagaaagatgctgtaagcagggatatcagattg
aaaagatttcttcatgtatttttttcttctccacttcctggagaagaaccccttggaaga
ttagagccattagaaaatgcacctttgttggcattagtccataaaatgaacaattgcctc
agtcagatggaacagtttcctgtcaaagtgcatgacttccctagtggaaatggaacaggg
agcagtttttctctcaacagaggatcccaagctttaaaattcttcaatacacaccagtta
aaatgccaactgcaaagacatccagactgtgctaatgtgaaacagtggaaaggtggacct
gtgaagattgatcccctggctttggtacaagccattgaaagataccttgtagttagaggc
tatggaagagtaagagaagatgatgaagatagtgatgatgatggatcagatgaagaaata
gatgaatctttggctgctcaattcttaaattcagggaatgtgagacatagactgcaattt
tacattggagatcacttgctgccatacaatatgactgtgtatcaagcagttaggcagtac
agtctgcaagctgaggaggagagagagtctacagatgatgaaagcaacccattaggaaga
gctgggatttggacaaaaacacatactatttggtacaaacctgtgcgggaggatgaagat
ggtaataaggactgtgttggtggtaaaagaggaagagcacaaactgctcccacgaaaacc
tcccctagaaattctaaaaaacatgatgaattgtggcatgatggtgtgtgcccttcggta
ttaaatcccctcgaagtttacctcatatctgctccacctgaaaacataacatttgaagat
ccctcattagatgtaattcttcttttgagagttttacatgctatcagtcgatactggtat
tacttgtatgataatgcaatctgcaaggagataattccaacctcagagtttatcaacagt
aaactgacagcaaaagcaaacaggcagcttcaggatcctttggtaattatgacaggaaac
ataccaacttggctgacagaacttggaaaaacatgcccatttttctttccatttgatacc
cgtcaaatgctgttttatgtaactgcttttgatcgtgatcgagccatgcaaagactactg
gatactaatccagaaatcaatcagtcagattctcaggatagcagagtggcaccacgactg
gacaggaaaaaacgcactgtgaacagagatgagctgttgaaacaggcagaatctgtgatg
caggatctaggcagttcaagagccatgttggaaatccagtatgagaatgaagttggtaca
ggcctaggccccacgctagagttctatgcacttgtatctcaggaactacagagagcagac
ttaggcctttggagaggagaagaagtcactttagccaatccaaaaggaagccaggaaggt
accaagtacatccataaccttcaaggcctttttgcgcttccttttggtagaacagccaag
ccagctcacatagcaaaagttaaaatgaagttccgctttctggggaaactaatggctaag
gcaatcatggattttagactggtggatcttcctcttggactccctttttataaatggatg
ctacgacaggaaacttctttgacatcacatgacttgttcagtattgatccagtagtagcc
aaatcaatatatcaccttgaagatattgtaagacaaaagaaaagacttgaacaggacaaa
acacagaccaaagaaagtctacagtatgcattggaggctctgactatgaacggctgctca
gtggaagatctagggctggacttcacacttcctgggttccctaatatagaactgaaaaaa
gggggaaaagatacacctgtcactatccacaatttagaggagtatctcagattggttata
ttttgggcactaaacgaaggtgttgccagacagtttgactcattcagagatggatttgaa
tcagtctttcccctcagtcatcttcaatacttctatcccgaggagttggagcagcttctg
tgtggcagtaaaacagacacttgggatgcaaagactttaatggaatgttgcaggccagat
cacggttatacacatgacagtcgagcagtgaagtatctctttgaaattctgagtagcttt
gatagtgagcagcagagactgtttcttcagtttgtgacgggtagccccagactgcctgta
ggaggctttcgaagtttgaatcctccattaacaattgtacgcaagacatttgagtctaca
gagaatccggatgatttcttaccctcagtaatgacttgtgtgaactatctcaaattgccg
gactattctactattgagataatgcgtgaaaaactcttgatagctgcaagagaagggcag
cagtcattccatctttcctga
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