KEGG   Strigops habroptila (Kakapo): 115611645
Entry
115611645         CDS       T08851                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
shab  Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:shab00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:shab01009]
    115611645 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:shab04121]
    115611645 (TRIM42)
Protein phosphatases and associated proteins [BR:shab01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     115611645 (TRIM42)
Ubiquitin system [BR:shab04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    115611645 (TRIM42)
SSDB
Motif
Pfam: fn3 zf-B_box Pur_ac_phosph_N Ig_DSCAM-DSCAML_C AbiGii_2 Ig_J_second
Other DBs
NCBI-GeneID: 115611645
NCBI-ProteinID: XP_030350751
LinkDB
Position
8:complement(5899638..5908260)
AA seq 733 aa
MDENGYSCSVWPCCLNWYYQICHSTNEHCCLCWRFLFTNEQNCSCFPCPYDGKTCQCCHC
SCAEHANCWWCCCSCANDPDCKCCCCCCSAENTECQYYESRCCRRSDNKRYQSRTPGLVQ
SKEVMPRFRTRNNASVITTERNVSSHAFRDQLSCPICKELFLQPLMLPCNHCICEKCVNK
SKTRVEVTENFYIVLCPVCSKAHCLDYTNKIQLRKNYLRAKLAKKYMRRHGFLRWRFDRS
ERPVYCESCRERRRVATKRCRTCGINYCSECLYLSHNKYSVQDHILTRAHHDDNEQWRCL
LHNNSDLSEYCLDDHELICGICKSSLHNNHKVIPLGVACSREAASLFGTIEEFRKVRQGI
DNDLMEVILSKNKFKTYKDTKRKEIRNGFLKLNMVLHQQEKEMMELLENIELKKQKEISD
YINYTSSQLSYMDGLIQYCKEALEEESQVVFLQSAHCLVKEIENTVPSIFQPSPRLREDP
LSKIHLNFDEILSILQGLVPSLIGIMESESEAEKYPYSFNPEIPVRGGASSTQVSKQGIF
FQSPSSNSLLDLGVLSKDTLRRPNSNPSDLPTKSKEVCVHKDTACETPRKEKKYEIVKHS
SPEPIDSDSVPVPGPVLIYQTVVYSRSAKIYWTCPTEEVDFFEVEFYEVARTSPDNIVQT
QLAGQLSKVQQQNLEIHNLDPNTEYLFKVRAVNKGGQGDWSEICKVLTSDEPGKTREQVE
EAEGHSGCSAYPI
NT seq 2202 nt   +upstreamnt  +downstreamnt
atggatgaaaacgggtattcctgttcagtctggccatgctgtttaaactggtactaccaa
atttgccacagcaccaatgaacattgctgcttgtgttggcgcttcttgtttaccaatgag
cagaactgcagctgtttcccatgtccatatgatggcaaaacttgccagtgctgccactgc
tcatgcgcggagcatgcaaattgctggtggtgctgctgctcttgtgcaaatgacccagac
tgcaaatgctgctgctgctgctgcagtgcagagaatacagaatgtcagtattatgaaagc
aggtgctgcagaaggtctgacaacaaacggtatcagtcaagaacaccaggacttgttcag
tcaaaagaagtcatgcctaggttcagaactaggaataatgcatctgtcattacaacagaa
aggaatgtctccagccacgctttccgtgaccagctttcctgtccaatctgtaaggaactg
tttctccaaccacttatgctgccgtgcaaccactgcatttgtgagaagtgtgtaaataaa
agcaagaccagagttgaagtaactgaaaacttttatatcgtcttatgcccagtgtgtagc
aaagcacactgcctcgactacacaaataaaattcagctgaggaagaattatctccgagca
aaactagccaagaaatacatgcgcaggcatggctttctgaggtggagatttgaccgcagc
gaaagaccagtctactgtgaaagttgcagggagagaagaagagtggcaaccaaaagatgt
agaacgtgtggaatcaattattgtagtgaatgtctgtatttaagtcataacaagtatagc
gttcaagaccacattttaacgagagcacatcacgatgacaatgaacagtggcgctgctta
ctgcacaacaactcggacctctctgaatactgcctagatgaccatgaactgatctgtggg
atctgcaagagctcactgcacaacaatcacaaggttattcccttgggagtcgcgtgttca
agagaggctgcttccctctttggtacaattgaagaatttagaaaagtacgccaaggaatt
gacaatgatctaatggaagttatcctgtcaaaaaataaattcaagacctataaggacacc
aaaagaaaggagatcagaaatggattcttaaaactaaatatggttcttcatcaacaagaa
aaggagatgatggagttgcttgaaaacattgaactcaaaaaacagaaagaaatttcagac
tacataaactatacctccagccagctgtcatacatggatggccttattcagtactgcaaa
gaggctcttgaggaggaaagccaagttgtatttctgcaatctgcacactgcttagtgaaa
gaaatagaaaatacagttccttccattttccaacctagtccacgtctaagagaagatccc
ttaagcaaaattcacctcaactttgatgaaattctctccattttacagggacttgttcca
tcccttattggcataatggagtcagaaagtgaagcagaaaaatatccctattcttttaac
ccagagataccggttcgagggggtgcctcaagcactcaagtatccaagcaaggaatattt
ttccaaagcccatcttcaaattccttgcttgatttaggtgtactgtcaaaagacactctc
agaagaccaaactctaacccttccgatcttcctacaaagagtaaggaagtgtgtgtgcac
aaggatacagcttgtgaaactccaagaaaagaaaaaaaatatgagattgttaaacattca
agtccagaacctatagacagtgactcagtcccagtcccaggacctgtgctcatataccag
actgttgtttactcaaggtctgccaaaatttactggacttgtcccacagaagaggtggat
ttctttgaggtagagttttatgaagttgctagaactagtcctgataacattgtccagaca
caactagctggccagctaagcaaagtacagcagcagaacctggagatacataatttggat
ccaaatacagaatacctgtttaaagtccgtgctgtcaacaaaggaggccaaggagactgg
agtgagatctgtaaggtactcacttcagatgaacctgggaaaactcgagaacaggtggaa
gaagcagaagggcattcaggctgctctgcatatcccatatag

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