Strigops habroptila (Kakapo): 115611647
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Entry
115611647 CDS
T08851
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shab03036
]
115611647 (SMC4)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
115611647 (SMC4)
Condensin II
115611647 (SMC4)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
115611647
NCBI-ProteinID:
XP_030350754
UniProt:
A0A672UHW9
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Position
8:26894418..26933920
Genome browser
AA seq
1304 aa
AA seq
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MEQPTEIMPSKSTKASTAAHGKGREPLEESTSDMEVENEGNRKLGEVPPQAVSSEVVDNQ
TLEEILGSISPPPPPVVTNEAGAPRLMITHIVNQNFKSYAGEQTLGPFHKRFSCIIGPNG
SGKSNIIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHTDIQSCSVEIHFQKIIDKEGDDYE
VIPNSKFCVSRTAYRDNSSVYHINGKKATFKDVGILLRSHGIDLDHNRFLILQGEVEQIA
MMKPKGQTEHDEGMLEYLEDLIGSARLKEPIQVLCRRIEILNERRGEKLNRVKMVEKEKD
ALEADRNKAIEFLCLENKMFKEKNRICQYYIHDLKKRLNDMEMQKEKINEETKDVNEKSK
KLGDEMKAKSKSLKELEKKRGKITKFIEEKKEEFTKLDLQDVKVRENLKHAKSKTKKLEK
QIQKDKEKVLELKKVPADSEKSITETTSKKELLEKTKEEEELKLKQVIDSLKQETQGLQT
EKESKEEELMEFIKTVNEARSKRDVAQSELEIYLARHNTAVSQLNQAKEALKTVSETLKE
RKAAIKEISVKLPQAEQELKKKENELEKLRREEESAKNLVRNLRHKVEEAKSSLAMSRNR
GRVLEALLQQKKSGNIPGLYGRLGDLGAIDEKYDIAISSSCGALDNIVVDTIDTAQACVN
FLKTEGIGVATFIAMDKMAVWEKNLQKIPTPENVPRLFDLVKANDEKFRLAFYFALRDTL
VANNLEDASRIAFQKDKRWRVVTLQGQVIEQSGTMTGGGGKVMKGRMGSLVVMDVSEEEV
NKMECQLQKDSKRAVQYEEEKSLLEEAISKLQRDVREMKNNLEKYSASIKNLPEQEIHLK
TRIKELEANVIATAPDKTKQNELEKVLNGYKKDYDCAAAKAGEIESEVKRLHNLIIDTNN
QKLKPHQDKLNKINKEIDECFSTITKAQVAIKTADRNVKKSQDALLHTEKELEDNEKEIK
DLMKELTELEAKAAEVMNDCRQAEEALPGIQQEHHDLLQEIKIIQDEEHALQKEALNIKL
KMEQIDSHISAHQSKMKYWQKEMSKLSLHPIEDKQPEELPVLSQEELEALKDPNVITNQI
ALLEAQCNEMKPNLGAIAEYKKKEELYLKHVAELDDVTNERDNFRQAFEDLRKQRLNEFM
AGFNVITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEK
TLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIVISLRNNMF
EIADRLIGIYKTHNTTKSVATNPKVIAAKGLDELKAIGCGIAQP
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggaacagccaacagagatcatgccaagcaagagcaccaaagcctctacagcagcccat
gggaaaggcagagagcccttagaggagtccaccagtgatatggaagtggaaaacgaaggc
aacagaaagcttggcgaagtacctccacaagcagtctcaagcgaggtggttgataatcaa
actttagaagagattttgggtagcatctctcctcccccacctccagtagtgaccaatgaa
gctggcgctcctcgtcttatgataactcatattgtaaaccagaacttcaaatcttacgca
ggggagcaaactttgggaccttttcataagcgtttttcatgtattattgggccaaatggt
agtggaaaatccaatatcattgattcgatgctttttgtgtttgggtatcgagcacaaaaa
atcagatccaaaaaactctctgtgctgatccataattctgatgaacatacagatatccag
agttgttctgtggaaatccacttccaaaagatcattgacaaggaaggagatgattatgaa
gtcattcctaacagcaaattttgtgtatctagaactgcctatagagataattcttcagtc
taccacatcaatggaaagaaagcgaccttcaaagatgttggtattcttcttcgaagccat
ggaattgatctggaccataacagattcttaattttacagggggaagttgaacaaatcgct
atgatgaaaccgaaaggccagactgaacatgatgaaggcatgcttgaatatttagaagac
ttaataggatctgcacgactaaaagaacctatccaagttctgtgtcgcagaatagagatt
ttaaatgaacggagaggggaaaagttaaacagagttaaaatggtggaaaaagaaaaggat
gccttggaagcagacaggaataaagccattgaatttctttgtttggaaaacaaaatgttt
aaagaaaagaatcggatctgtcaatactatattcatgacctaaagaaacgattaaacgat
atggaaatgcagaaagaaaaaattaatgaagaaacaaaagatgttaatgagaagagcaag
aaacttggagacgaaatgaaagccaagagtaaaagtttgaaagaacttgaaaagaaacgt
ggtaaaataacaaagtttatcgaggaaaaaaaagaagaatttactaagttggatttgcag
gatgttaaagtaagggaaaatttaaaacatgccaagagcaagactaaaaaattggagaag
caaattcagaaggacaaagaaaaggtattagaattgaaaaaagtgcctgccgatagtgaa
aaatctatcaccgaaacaacgtctaagaaagagcttcttgaaaagacaaaagaggaagaa
gaattaaaactcaagcaggttatagatagccttaagcaagaaacacaaggacttcagaca
gaaaaagagagcaaagaggaggagcttatggagtttattaaaacagtgaatgaagctcgt
tcaaagagggatgttgcccagtcagagcttgagatctatcttgcccgtcataatactgct
gtgtctcagttaaatcaggcaaaggaggctctgaagactgtttcagaaactcttaaggaa
aggaaggctgctatcaaagagataagtgtaaaattaccccaagctgaacaggagttgaag
aagaaagaaaatgagcttgagaaactaagaagagaagaagaaagtgccaagaatcttgtt
cgaaacctgcgtcataaagtagaagaagccaaaagttctttagcaatgagtcgcaatcga
ggaagagtgcttgaggctctgcttcagcagaagaaaagtggaaatattcctggactatat
ggaagactgggagacttgggagctatcgatgagaaatatgatattgctatttcatcatct
tgtggtgccttagacaacattgttgtcgatacaattgatactgcacaggcatgtgtgaat
ttcttgaagacagaaggaatcggagttgccacgtttatagccatggacaaaatggctgtg
tgggaaaaaaatcttcagaaaatccccactccagagaatgttcctcggttgtttgatctg
gtgaaagcaaacgacgagaagtttcgcctggctttttacttcgcattacgtgatacttta
gtagctaataacttggaagatgcttccagaatagcatttcaaaaagataaaagatggagg
gtggtaacgcttcaaggacaagtcattgaacagtcaggaacaatgactggtggtgggggt
aaagtaatgaagggcagaatgggttctttagtcgtaatggatgtttcagaagaagaggtc
aataaaatggaatgtcaactgcagaaggattctaaaagagcagtacagtatgaagaagag
aaatcactacttgaagaagctataagcaaactgcaacgagatgttcgggaaatgaaaaat
aatttagaaaagtattcagcaagtatcaagaatttacctgaacaagaaattcatctgaaa
acccgcattaaggaacttgaagccaatgtaattgctactgctccagacaaaaccaaacag
aacgaattggaaaaagtccttaatggttataaaaaagattatgactgtgctgctgcaaaa
gctggtgaaatagaaagtgaagttaaacgactacataacctcataattgataccaataat
cagaaacttaaaccacatcaagacaaacttaacaagatcaacaaagaaatagacgaatgt
ttttcaactattactaaagcccaggtggcaatcaagactgcggatagaaacgtgaaaaaa
tctcaagatgctcttcttcacacggagaaggaattggaagacaatgagaaagaaattaaa
gacttaatgaaagaactgactgaactggaagccaaagctgctgaggttatgaatgactgc
aggcaagccgaagaagcgttgccaggaattcaacaggagcatcatgatttactccaggag
ataaaaatcattcaggatgaggaacatgcacttcaaaaggaagctcttaatattaagctg
aaaatggaacaaattgacagtcatatttctgcacaccagtcaaagatgaaatactggcaa
aaagagatgtcaaaattatcactgcaccccatagaagataaacaacctgaagaacttcca
gtactaagtcaagaagagctggaggctctcaaggatcccaatgttatcactaatcaaata
gctctcctggaagcccagtgtaatgaaatgaaacccaaccttggtgctattgcagaatac
aagaagaaggaagagctgtacttgaaacatgtggctgaactggatgacgttaccaatgag
agagacaacttcaggcaagcttttgaagatctccggaaacaaaggctaaatgagtttatg
gcaggatttaatgtaataacaaataaactgaaggagaactaccagatgcttacactggga
ggggatgccgagttagaacttgtggacagtctggatcccttctctgagggaatcatgttt
agcgttcggcctcccaagaaaagttggaagaagatatttaacttatcgggaggcgagaag
acccttagttcactggctttagtttttgctctccatcattacaaaccaacgccactttat
tttatggacgaaattgatgcagcacttgacttcaaaaatgtgtctattgtagcgttttac
atatatgagcaaaccaaaaatgcacagttcattgtcatctccctgcggaacaacatgttt
gagattgcggacaggttaattggaatttataagactcacaatacgacaaaaagcgtggca
acaaaccccaaagttattgcagctaaaggactggatgaactcaaggctattgggtgcggt
atagctcaaccatag
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