KEGG   Strigops habroptila (Kakapo): 115611756
Entry
115611756         CDS       T08851                                 
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
  KO
K06237  collagen type IV alpha
Organism
shab  Strigops habroptila (Kakapo)
Pathway
shab04382  Cornified envelope formation
shab04510  Focal adhesion
shab04512  ECM-receptor interaction
shab04518  Integrin signaling
shab04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:shab00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115611756 (COL4A3)
   04518 Integrin signaling
    115611756 (COL4A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115611756 (COL4A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115611756 (COL4A3)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    115611756 (COL4A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:shab04147]
    115611756 (COL4A3)
   00536 Glycosaminoglycan binding proteins [BR:shab00536]
    115611756 (COL4A3)
Exosome [BR:shab04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   115611756 (COL4A3)
Glycosaminoglycan binding proteins [BR:shab00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   115611756 (COL4A3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 115611756
NCBI-ProteinID: XP_030351006
LinkDB
Position
8:19522689..19583075
AA seq 1644 aa
MSCVCKGKSPCFCDSMKGNKGEKGYPGVPGPPGHRGFPGPEGPPGPQGPKGSPGLTGLVG
PKGIRGVPGIPGFSGPPGLPGEPGTVGPLGRSGVPGCNGTKGDQGFPGPPGRRGPPGVPG
IAGIKGEKGCPADGYDQVYDAKGDPGLPGMPGFQGAQGAQGYPGEIGPQGPPGAPGMPGK
AGPPGPKGLMGLKVIGTKGRKGDIGLTGPPGPPGTVIVTLSGPDNMTDLKGEKGDKGSRG
LPGPMGFTGPVGDSQSEKGDQGEPGVRGKPGKDGAPGPPGLPGQNGEQGKPGLAGRQGAK
GRKGNTGPPGACGRTEYYDNVVGEKGDEGPPGPPGPKGQRGMPGPQGPPGDAGRPGVSRP
GLRGPPGFPGPKGAKGEKGQTGLCIVGPPGLPGMTGRPGSVGLPGPPGEPGRVTFRTGLP
GLPGKPGCTGPPGPPGDIGMKGDEAYVCTDCSYIPGIPGLPGSPGPHGQDGMPGREGTTG
PKGSPGSPGVPGFPGAQGPPGFKGHQGYKGSKGEPGYVYPEGPKGERGDPGARGDKGRKG
SSGFLGRPGSKGSKGSKGEEGLAGSKGDRGLPGLPGSLGLPGEMGLPGLPGYGPQGIRGF
KGSKGIPGPPGLPGEAGLKGEATRITPLPGLPGPQGPDGLPGPPGVPGRAGARGQPGDSG
RPGPTGDTGFPGLGFPGNPGPKGDKGLAGSRGSPGCEGKIGDTGRAGNIGQPGEKGDPGM
VIPGEPGRLGSPGSHGIPGLKGDTGFPGLPGLPGRAGHDGDDGLRGDRGSPGVPGDPGFP
GKPAECLIGLPGLPGGRGATGPPGGRGSQGSKGKLGPPGLSIPGIYGMPGEPGLIGLHGN
TGLPGPKGQSGRPGISGVPGSRGEPGIMGLLGIPGPPGMIGRPGNPGIRGSSGFPGLKGR
KGFLGAKGEQGDKGFPGPSETLVGIGNKGERGLKGVHGRMGLKGEKGDAGVQGPPGLDGS
EGIPGLPGVKGFMGLPGITGEPGFPGAPGNKGDMGFPGSKGQKGSPGFPGPSGDPGPPGC
DGFTGDKGDPGYPSAGPPGEPGPKGNPGPPGILGSKGEKGSQGHPGHKGVPGPHGIRGET
GSAGIPGKLGLPGNIGVKGRQGRPGQQGITGPPGAIGEPGKNGLVGERGSQGQDGMPGPP
GVKGEPGAPGRGIPGLRGIPGRRGIKGDMGLPGFPGPPGMKGHQGDQGPVGPPGLVGLPG
FQGSTGMAITGQKGNRGIAGADGRPGAPGFPGPPGLSTLSMKGSKGVRGADGIPGPTGPA
GDIGPPGPKGIEGRSGYPGARGAPGFLGFPGVKGEKGNQGHPGPQGAEGPRGPKGQHGPP
GVPGKIFSIPGSKGPPGLPGIPGTLGDQGIQGIPGLPGPKGVKGLPGRFGHPGQPGLPGP
KGDRGFPGERGQPGLVGFPGLQGLPGSPGTIIAGPTRRGFIFTRHSQSTKIPSCPLGTSQ
LYVGYSLLFVQGNERAHGQDLGTAGSCLQRFTTMPFLFCNTNDVCSFASRNDYSYWLSTA
TVMPVDMAPISGRALEPHISRCVVCEGAAMVIAVHSQTTVVPACPEGWISLWKGFSFVMY
TSAGSEASGQALASPGSCLEEFRAIPFIECHGRGTCNYYTNSYSFWLASLNPRRMFSKPR
PQTLKAGELENIISRCQVCMKRPV
NT seq 4935 nt   +upstreamnt  +downstreamnt
atgagctgtgtatgcaaaggtaaaagtccctgcttttgtgatagcatgaaaggtaataag
ggtgaaaaaggctatcctggtgttccaggtccacctggtcatagaggctttcctggtcca
gaagggcctccagggccacagggaccaaagggttctccagggcttacaggcttagttgga
cccaaaggaatacgaggagtcccaggaatacctggattttcaggtcccccaggccttcca
ggtgaaccaggtactgttggacctcttgggcgttcaggtgttccaggatgcaacggcaca
aagggcgatcaaggttttccaggtcctccaggtagaagaggtcctccaggtgttccaggt
attgctggcatcaaaggagagaaggggtgccctgcagatggatatgaccaagtgtatgat
gcaaaaggtgatcctggattgccaggaatgcctggatttcagggtgcccagggtgctcaa
ggatatcccggggaaattggaccacagggccctccaggagctccaggtatgccagggaaa
gcaggacctcctggacctaagggtcttatgggactgaaagtaataggaaccaaaggaaga
aagggtgacattggtttaactggaccccctggacccccaggaactgttattgtgacatta
agtggaccagacaacatgacggacttgaaaggagagaaaggagataaaggatcaagagga
cttccagggccaatggggtttacagggccagttggtgattctcaaagtgaaaagggtgac
caaggagaacccggagtacggggtaaacctggaaaagatggtgccccaggtccacctggc
ttaccgggacaaaatggtgaacagggcaaaccaggactggctggcaggcaaggagctaag
gggaggaaaggaaacactggtccacctggagcttgtggtagaaccgaatattatgataat
gtggttggtgaaaaaggagatgaagggccgcctggacctccaggaccaaaaggtcaacgt
ggcatgcctgggccacagggtcctcccggagatgctggtagaccaggtgtgtcaagacct
ggtctgagaggtcccccaggttttcctgggccaaaaggagcaaaaggagagaaaggacaa
actggcttgtgtattgtaggccctccaggactacctggtatgactggcagacctggttct
gttggattaccaggtcctccaggagaaccaggtagagtaacatttagaacaggcctacca
ggacttcctggaaagccagggtgtacaggaccgccgggacctccaggagatattggcatg
aaaggtgatgaagcttacgtgtgtactgattgcagctatattccaggaattcctggtctt
cctggttctcctgggccacatggccaagatggcatgcctggtagagaaggaacaacaggt
ccaaaaggttctccaggttctccaggagtgccagggtttccaggagctcaaggacctcca
ggttttaaaggacatcaaggatataaaggatcaaaaggtgagcctggatatgtgtatcca
gaagggccaaaaggtgaacgaggagatccaggggccaggggagacaaaggaagaaaaggt
tcaagtggatttctgggaagacctggctctaaagggtcaaagggttctaaaggtgaagag
gggcttgctggttcaaaaggagatagaggactacctggattgcctggcagtcttggtctt
cctggagagatgggccttcctggactgccaggttatggaccgcaaggaataagaggtttc
aaaggctctaaaggaatacctggtccacctggattacctggagaagctggtctgaaagga
gaggctactagaataacaccattacctgggttgccaggacctcaaggaccagatggttta
cctggacccccaggagtgcctggtagggctggagcaagaggtcagccaggtgattcagga
cgtccagggccaacaggtgacacaggctttccagggctcgggtttccaggaaacccaggt
ccaaaaggagacaaaggacttgcaggaagcagagggtcaccaggttgtgaaggaaagatt
ggagacacaggccgagctggaaacataggacaaccaggagaaaagggtgacccaggcatg
gttattcctggagagccaggtagactgggttcaccaggaagtcatggcattcctggctta
aaaggtgatactggatttccaggacttccaggcctaccagggcgtgccggacatgatggt
gatgatggcctaagaggagatcgtggctcacctggagttcctggagatccaggttttcca
gggaaacctgctgaatgtctgattggcctgccaggtttgccaggtggccggggagctaca
ggcccaccaggaggaagaggttcgcaaggttcaaaaggaaaactaggtcctcctggcttg
agtatcccaggaatctatggaatgcctggggaacctggattaataggtcttcatggaaat
acaggattacctggtcccaagggacagtctggaaggccaggaatctctggtgtgccaggc
tcaaggggagagccaggtataatgggcctgttaggaattcctggacctcctggcatgatt
ggaagaccaggcaacccgggtatcagaggttcttctggcttcccaggactaaagggaaga
aaaggatttcttggagcaaaaggcgaacaaggtgataaaggttttcctggaccatccgag
accttggttggtatagggaataaaggagaacgaggtttaaaaggagttcatggaagaatg
ggcctaaaaggagaaaaaggagatgctggtgtgcagggtcccccaggtcttgatggatct
gaaggaatacctggtctaccaggtgtcaaaggatttatgggtcttccagggattactgga
gaaccaggattcccaggtgcaccaggaaacaaaggggacatgggatttccaggttcaaaa
ggacagaaaggatctccaggctttccaggaccatcaggtgaccctggtccaccaggctgt
gatggctttacgggtgacaaaggagatcctgggtacccatctgctgggcctccaggagaa
cctggtccaaagggaaatccaggccccccaggaattttgggcagcaaaggagaaaaagga
tcccaaggtcatccaggacataaaggagtaccaggaccacatgggatcagaggggaaact
ggaagtgcaggaatcccaggaaagcttggacttcctggaaatattggcgttaaaggacgg
cagggccgcccaggccaacagggcattacaggccctccaggtgccattggagagcctgga
aaaaatggacttgttggtgaaagaggtagtcaaggtcaggatggtatgcccggtccccca
ggagtaaagggagaaccaggagcaccagggagaggaatccctggccttcgaggtattcct
ggtcggagaggaatcaaaggggacatgggactgcctggttttcctgggccaccaggtatg
aaaggtcatcagggtgatcaaggacctgttggacctcctggcttagtggggttacctgga
tttcaaggctcaacaggcatggcaattactggtcaaaaagggaatagaggtattgctggt
gcagatggaagaccaggtgctcctggttttccagggcctcctggtctttccactctgagc
atgaaaggaagcaaaggagttagaggtgcagatggcataccagggccaacgggcccagcc
ggcgacattggtcctccgggtcctaaaggaatagaaggtcgatcgggttatcctggtgct
agaggggccccaggatttcttggattcccaggtgtaaaaggagaaaagggtaatcaggga
caccctggaccgcaaggtgcagaagggccaaggggaccaaagggccagcatggtccacct
ggagttcctgggaaaatattctccatcccaggaagcaagggtcctcctggactgccagga
ataccaggaacactgggtgatcaaggaattcaagggattcctggactaccaggacctaaa
ggagtaaaaggtctaccaggaagatttggtcatccaggccaaccaggactgcctggtcca
aaaggagacaggggatttccaggagaaagaggacaacctggactggttggctttccaggt
ctacaggggttacctggatcaccaggtactatcatcgctggtccaacaagaagaggtttt
atctttacccgacacagtcaatcaacaaagattccttcatgcccacttgggacatcgcag
ctctatgttggttattcgctgctttttgtacaaggaaatgaacgagcacatggacaagat
cttggaacagctggtagctgcttgcagagatttaccaccatgccattcttattctgtaac
accaatgatgtttgtagttttgcttctcgcaatgactattcatactggctgtcaactgca
acagtaatgccagtagacatggcaccaatttctggcagggcactagagccccatataagc
aggtgtgttgtctgtgaaggagctgcaatggtaatagcagttcacagccaaacgactgta
gttcctgcatgtccagaaggctggatatctctctggaagggtttctcttttgttatgtac
acaagtgccggctcagaagcttctggccaagcattggcatctcctggatcttgtttggaa
gaatttagagccattccattcatagagtgccatggcagggggacgtgcaactactacacg
aattcctacagtttctggttggcatcgttaaatccaagaagaatgttcagcaaacctcga
ccacagactttgaaagcgggagaactagaaaatatcatcagccgttgtcaggtctgcatg
aagagaccagtctaa

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