Strigops habroptila (Kakapo): 115611816
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Entry
115611816 CDS
T08851
Symbol
CLDN1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03272
Virion - Hepatitis viruses
shab04382
Cornified envelope formation
shab04514
Cell adhesion molecules
shab04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
115611816 (CLDN1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115611816 (CLDN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115611816 (CLDN1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115611816 (CLDN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
shab03037
]
115611816 (CLDN1)
04147 Exosome [BR:
shab04147
]
115611816 (CLDN1)
04515 Cell adhesion molecules [BR:
shab04515
]
115611816 (CLDN1)
Cilium and associated proteins [BR:
shab03037
]
Other cilia and associated proteins
Stereociliary proteins
115611816 (CLDN1)
Exosome [BR:
shab04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
115611816 (CLDN1)
Exosomal proteins of colorectal cancer cells
115611816 (CLDN1)
Cell adhesion molecules [BR:
shab04515
]
Immunoglobulin superfamily
L1 family
115611816 (CLDN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Voltage_CLC
CD20
OppC_N
DUF4134
Cytochrom_B_C
Motif
Other DBs
NCBI-GeneID:
115611816
NCBI-ProteinID:
XP_030351154
UniProt:
A0A672UIT3
LinkDB
All DBs
Position
8:complement(37422728..37434844)
Genome browser
AA seq
211 aa
AA seq
DB search
MASGGLQLLGFVLAFLGWIGIIISTAMPQWKMASYAGDNIVTAQALYEGLWMSCAMQSTG
QIQCKVYDSLLKLESSLQATRALMVAAILLGLVAVFVSVTGMKCMKCMEDDQVKKMRMAV
FGGVIFIIAGLAALVATSWYGNRVARAFYDPFTPVNTRFEFGSALFIGWAAASLAMLGGA
FLCCSCPRRETSYPPSRGYPKNAPSTGKDYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgggggactgcagctcctgggcttcgtgctggccttcctgggctggatcggc
atcatcatcagcaccgccatgccccagtggaagatggcatcctacgcgggggacaacatc
gtcacggcccaggcactctacgaggggctgtggatgtcgtgcgccatgcagagcacgggg
cagatccagtgcaaggtctacgactcgctgctcaaactggaaagcagtctgcaggccact
cgggctttgatggtggctgcaatactcctgggccttgttgctgtgtttgtttctgtgact
ggcatgaaatgcatgaagtgcatggaagatgaccaggtgaagaagatgcggatggctgtc
tttggtggggtgatcttcatcattgcaggtttggcagcactggtggccacatcatggtat
ggcaacagagtggctcgagccttttatgatcctttcacccctgtcaacaccagatttgag
tttggatcagctctcttcattggctgggcagctgcttctctggccatgctggggggggcc
ttcctctgctgttcctgtccacggagagaaacttcatatccaccctcccgaggctatcca
aaaaatgccccctccacagggaaggattacgtataa
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