Strigops habroptila (Kakapo): 115612001
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Entry
115612001 CDS
T08851
Symbol
ITGA8
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-8
KO
K06584
integrin alpha 8
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04510
Focal adhesion
shab04512
ECM-receptor interaction
shab04514
Cell adhesion molecules
shab04810
Regulation of actin cytoskeleton
shab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115612001 (ITGA8)
04514 Cell adhesion molecules
115612001 (ITGA8)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115612001 (ITGA8)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115612001 (ITGA8)
04810 Regulation of actin cytoskeleton
115612001 (ITGA8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shab04515
]
115612001 (ITGA8)
Cell adhesion molecules [BR:
shab04515
]
Integrins
Integrin alpha subunits
115612001 (ITGA8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
115612001
NCBI-ProteinID:
XP_030351632
LinkDB
All DBs
Position
1:119148586..119260733
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AA seq
1054 aa
AA seq
DB search
MLRLSRGCRARRRQRPCPLLLLSALLWAPALVAFNLDEEKLTVYSGPPGSYFGYSVDFYI
PDHSTVSVLVGAPKANTTQPDIVEGGAVYYCGWPATQCRQIPFDNTNNRKIKVNGTREPI
EFKTNQWFGATVKAHKEKVVACAPLYHWRTLKDSPEKDPVGTCYVAIQNFSAYAEYSPCR
NSNADPEGQGFCQAGFSLDFYKNGDLIVGGPGSFYWQGQVITASIVDIIANYSFKDILRK
LAREKQTGVAPPSYDDNYMGYSVAAGEFTGDSEQELVAGVPRGAQNFGYVSIINSSDLTF
IQNFTGEQMASYFGYTVAVSDVNNDGLDDILVGAPLFMEREFESKPKEVGQVYLYLQESA
FLFQDAQILTGTEVFGRFGSAITHLGDLNQDGYNDIAIGAPFAGEDRRGKVLIYNGYSNG
LNTSPSQVLNGAWASQSMPSGFGFTLRGDSDVDKNDYPDLIVGAFGAGKAVVYRARPVVT
VNAQLILNPMIVNPDNKTCQLPGSQLLVACFTVRVCADFEGQSISDEIVLKGELQLDALK
QKGAVKRTLFFDYHQSHHYFSIAIERQKQLHCQDFLVYLRDETEYRDKLSPININLNYSL
DESSFEDSLTVKPILNYYQESSLTEQAYILVDCGEDNLCIPDLQLSAMPDKDQLIIGEEN
YVMLIINPRNDGEGAYEAELHIKIPPEXDYTGVERNNKALRVLSCDYKMENETRMVVCDL
GNPMVAGANFSTGIRFSVQHFENADFSINFELQIKSSNKINPTSNLVNLHINISAAAQVQ
IRGVSHPPTIILPLHNWEPKDEPTKEEELGPLVEHIYELHNIGPSAINNTVLHVGWPVSS
REEFLLYILHIQTHGPLHCQTSSPINTMQIKFAIPQDTPELAAFLYNSTISHYIRRREVT
VAEPHRKNSAKILNCTNVKCILISCTVGQLERGKSAALKIRSRLWAQTFLERKNDLYTLS
SNVSFKVKSMPYKVQPAKLPEGSIAIRTSVVWSTPNVSFVIPLWVIILAILLGLLVLAML
TLALWKCGFFDRARPPQDDMADRQQLTNNKTTDA
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcctcagccgcgggtgccgcgcccgccgccggcagcggccgtgcccgctgctc
ctcctgtcagcgctgctctgggcgccggcgctggtggccttcaacctggacgaggagaag
ctgacggtgtacagcgggcccccgggcagctacttcgggtactcggtggacttctacatc
cccgaccacagcacggtcagtgtcctggtgggagctcccaaagccaacaccacgcagcca
gacatagtggaaggaggagcggtgtactactgcggctggcccgccacccagtgcaggcag
ataccctttgataacaccaacaacaggaaaattaaagtcaatggcaccagggaacctatt
gagtttaagacaaatcagtggtttggggcaacagtcaaagctcataaggagaaagttgtg
gcttgtgctcccttatatcattggagaactcttaaagacagccctgaaaaggaccctgtt
ggcacctgctatgtagcaattcagaacttcagtgcctatgctgaatattcaccttgtcgc
aacagcaatgcagatcctgaaggacaaggcttttgtcaagcaggtttcagcttagatttt
tacaagaatggagacctgatagtaggcgggcctggtagtttttattggcaaggtcaggta
atcactgcaagtattgtggatatcattgcaaattattccttcaaggatattctgaggaaa
ctggcacgagagaagcaaacaggagtggcaccaccgtcatatgacgacaattacatggga
tactcggtggctgctggggaatttactggggattctgaacaagagttggttgctggagtc
ccaaggggtgcgcagaactttggctatgtctcaattattaattcttcagacttgaccttt
atccagaatttcactggtgaacagatggcgtcttattttgggtacactgttgcagtatct
gatgttaacaatgatggtttagatgatatcttagttggcgcccctctctttatggaacga
gaatttgagagcaaacctaaagaagttgggcaagtttatctgtacctgcaagaaagtgct
ttcctcttccaagatgcacaaattctgacaggcactgaagtgtttggtagatttggcagt
gcaattacacaccttggagatctcaatcaagatggatataatgacattgctattggtgca
ccatttgcaggagaagatagaagaggaaaagtgctaatttacaatggatacagtaatggg
ttaaataccagcccttcccaggttctcaatggagcctgggcctcacagtccatgccttcg
ggatttggcttcactctaagaggagactcagatgtagacaagaatgattacccagattta
attgtaggtgcatttggagctggaaaagcagttgtttacagagccagacctgtggtgaca
gtgaatgctcagctcattctgaaccccatgattgtgaatccagacaataaaacttgtcag
ctccctggctctcagcttttagtggcctgcttcactgtaagagtctgtgcagattttgaa
ggtcaaagtatttcagatgagatagtgctgaaaggtgaattgcaattagatgcgttgaaa
cagaaaggagctgttaagaggaccctcttctttgattaccatcagtcacatcattacttc
tctattgcgatagaaagacagaaacagctccattgccaggactttcttgtttatctcaga
gatgaaacagaatatagagataaactatctcccatcaatataaacttgaattatagtttg
gatgaatccagttttgaagatagcttgactgtgaagccaatactgaactattaccaggaa
agctcattaacagaacaggcttacattctggttgactgtggggaggacaacttgtgcatt
cctgacttgcagctttctgctatgccggataaagatcaactaataattggagaagaaaac
tatgtcatgctcataataaatccacggaatgatggggaaggagcctatgaagctgaacta
catataaagattccacctgagncagattacactggggttgaacgcaacaacaaggcactg
cgtgtattgagctgtgattacaagatggaaaatgaaactagaatggtggtttgtgacctt
gggaaccccatggtggctggcgcaaacttctctacaggcattcgattttctgttcagcat
tttgaaaatgcagatttcagcatcaattttgagctgcaaataaaaagttctaacaagatt
aatcccaccagcaatttggttaacctccatatcaacatcagtgctgcagctcaagtacag
atcagaggagtgtctcaccccccaacaattattttgccacttcacaactgggaacccaaa
gatgaacctacaaaagaagaagaacttggtcctttagtagaacatatttatgagcttcac
aacataggaccaagtgccatcaacaatacagttctccatgttggctggcctgtgtccagt
cgagaagaatttcttctttacattcttcatattcagacacatggaccattgcactgtcaa
accagctctcctattaatacaatgcaaataaagtttgctattccacaagacactcctgaa
cttgctgcttttttatataattccacaatttctcattacatcaggagaagggaagtcaca
gtggcagaacctcacaggaaaaactctgcaaaaatattgaactgtacaaatgtgaagtgt
atcctgatttcctgtactgtgggacaactggaaagagggaagagtgcagcactgaaaatc
aggtcccggctatgggcccaaacattcctggagagaaagaatgatctctatactctctct
tccaatgtgtccttcaaagttaagagcatgccatataaagtacaaccagcaaagctcccc
gagggaagcatagccatcagaacatctgtcgtttggtccactccaaatgtctcctttgta
atccctttatgggttataatactagcaatacttcttggactactggtactagctatgttg
actttagccttatggaagtgtggcttctttgacagagctagacctcctcaagatgacatg
gctgacaggcaacaactgacaaataacaagactactgatgcatag
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