Strigops habroptila (Kakapo): 115612018
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Entry
115612018 CDS
T08851
Symbol
ARHGEF4
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 4
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115612018 (ARHGEF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115612018 (ARHGEF4)
Membrane trafficking [BR:
shab04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115612018 (ARHGEF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
115612018
NCBI-ProteinID:
XP_030351662
LinkDB
All DBs
Position
8:8245935..8455408
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AA seq
2250 aa
AA seq
DB search
MKAKLTLTAYLTCWLLLTLCKKAYEKRLSASKKECQGSAVIKATGGTEESTSEKRQLHIQ
TPDPVENYISEGEFEDDLSSSTPSTIELEIRGSSQETDEDYFETLSHQSGSLSDVKTEPF
ESASDTESVSSDVTGETCLDSNCLLTERKNLRCSLPKAKAEKTLHALKCSRQPEFTQQVR
LEVSSKIKAAPSKTEFCIRSAKSEGEELGDEEPTLTSSTSNIESQVSEKGIVSQSNRKSV
AVLQSKADSESSKVHSCTNSVPVEDDVTRQKEHPAVLSIACLKANSENCLGFPKVQQFSF
QSDAASSCSLPNLHFETDGPNCKSYAETSDYKCELDSMSSIRCSRRNSVDSEKTTGKREK
HGSTDIMLTSDSFLYQSCFEPTSQPPLTRSEITESKTWHSVPENISAQSKTEYVENCIHL
TDKFRWSCSRIHLQGLDFEYTWKNLGRVTVNPEKIIKIEGKYGIERAFLNTDIDSNECQL
FQPEGSPQCVDYCLHSKSETCGLSPEAVGTCADSLSSIQIDACECNPEQNETSSALDCKP
VIINAEELISDQYKAEKDLEADRFPDATDVEFDIDDTENLTACHVGFPAVVENRDCDCSV
NCNSTGRIQQRGLKENGFESELSSMEIMVGEQSVDDSSNLDLGWKVPETPLQPGSSNTGA
ENKESMQQNTSCKTDALRSDSELVTNEHPAQKEKDEDSIFAVETTSGSDYINQRRHLMTL
PELKPALIIVSVEQKGLQCKTLNDNLPPEVVTETLSNIVNKDLTSAHTVSKTHDEPERVL
SESCSCEEQILAIHPIPRSAKLLPGTDTAEENPEVSQEKREKTYAVSSLGFTCSNSMVTS
AEVEFGSVAVSLDNDTLIAESQADGCEEVLLNSHSGSGVMISEKEPYRIKTGFESEIEQL
RKSQAETGENQVSKEEELKAHQGREEGSYIASAVTLEACSVSNLCQGDGANVDLQGPSVS
SEQSIARQESEGCNGSKEQIGICEEPSFREGKEGSAAEDTASPSKDSSLNLDVSDVFNYS
VKRETHNTCMLGLDNISTCSTNSEEMDDNSLHVMGSNSSLYKVQKPTKNGNSGKASRFLV
FSKMTSFRKSKTATAENQGSSSFFGCKAKLEELDAGKEDEDTESLQSFKSCSSGSVFHRK
ESYTSEYSDDDDLFYERPAGLFNRMSLRKASGSGRILMEDVDTNLTSSTLTAVKYADRQV
SSSSENNESEPVEFSGTRKSFPENEYKRNKTPEGKKFRTRLALAHKSLSSLFESKSPEKE
NSEQSSRVSVKNDKEKAKLRQSAWKAFLKSKEADGLKRPVLASLSPTQEGLNATSSHVMR
TSSVERQDSSNGHVFFKPQTANGSSTDTNYFDTSVEPVDVSSPAGIWRKRIQSHDMGMKY
SQSSDCDEQQEALSNSLNTSLEEYWMKSPFSPTDLPLPFNQSSPSCPQLSNSDGKDMPCR
PMSPKPQSPRSMSQHKSFRYPGRICATSMISLGNSSAVESSLEAPERPKTLKPRGSLLLS
VHSWDNEYQRDDSGISSQSQISLNTASSISDMLRDEESKQQCQTPPEKRPNEKWVPHRKR
RPSQVPPSPHPISTLESKAWRLSFLAPDEKAKEIPERRKRPKPLYKCFSFDDVWMERNQK
WKLEKETQPERGIQLRHLPEDQLKTGISPSIMSAVAFDILPLKLHPFSQSTPTGLDCVGW
KRRISSPVITDGALDKTALTDDVGSEEDLYEDFRSSNHRYGHPGGGGEQLAINELISDGS
VVYAEALWDHVTMDDQELGFKAGDVIEVMDATNKEWWWGRILDSEGWFPASFVRLRVNQD
EPMEDYPLKVEGGKEDDSSSGARRFGMGQTTKDQMRTNVINEIISTERDYIKHLKDICEG
YIKQCRKRADMFTEEQLKTIFGNIEDIYRCQKKFVKALEKKFNKDHPHLSEVGSCFLEYQ
TEFQIYSEYCNNHPNACMELSRLTKVNKYVYFFEACRLLQKMIDISLDGFLLTPVQKICK
YPLQLAELLKYTNPQHRDFKDVEAALNAMKNVARLINERKRRLENIDKIAQWQSSIEDWE
GEDVLVRSSELIYSGELTKISHPQAKSQQRMFFLFDHQLVCCKKDLLRRDILYYKSRINM
DDMEILDVEDGKDKDFNISVKNAFKLRCRDTEEVHLFCAKKPEQKQRWLKAFENERRQVQ
LDQETGFSITEVQKKQAMLNASKQHHTGKPKAVTRPYYDFLMRQKHPTLPTMVPQQQVFM
LAEPAQALELLAEHQQADTLPEMRAARVCA
NT seq
6753 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaaactcactctgacagcgtacctgacatgctggctgttgctgacactctgc
aagaaagcctatgagaaaagactctctgcttctaaaaaggagtgccaaggaagtgctgta
ataaaagctactggaggaacagaagagagtacttctgagaagaggcagctccacatccag
accccagaccccgttgaaaattacatcagtgaaggagagtttgaagatgatcttagttct
tctaccccgagcacgatagagctggagattcgtggatccagccaagaaacagatgaagat
tattttgagaccctgtcacatcagagtggatctttgtcagatgtgaaaactgagcctttt
gaaagtgcatcagacacagaatctgtttccagtgatgtaactggggaaacttgcttggat
tcaaactgccttttaactgaaagaaaaaatctgcgctgtagccttcctaaagcaaaggca
gaaaaaactcttcatgcactgaagtgctcaaggcaaccagaattcacccagcaggtgcgg
ttagaagtgtcctccaaaataaaagccgcaccgagcaagactgaattttgcatacgatct
gcaaagtcagaaggtgaagaattgggtgatgaagagccaacattaactagtagcacttcc
aacatagagagccaagtcagtgaaaagggtattgtttcacagtcaaatagaaagtctgta
gcagtactgcaaagtaaagcagattctgaaagcagtaaagtgcactcctgtaccaactca
gtacctgtagaagatgatgttacaagacagaaggaacatcctgcagtattaagcattgct
tgtttaaaagcaaactcagaaaactgtttgggttttcctaaggtacagcaattttccttc
cagtcagatgcagcatcaagctgtagtttgcctaatcttcattttgaaacagatggacct
aactgtaaaagttacgctgagacatctgactataagtgtgaattagattctatgtccagt
ataagatgcagcaggaggaactcagttgacagtgagaaaactacaggtaaaagggaaaaa
catggaagtacagacatcatgttgacatcagattcattcttgtaccagagttgctttgaa
ccaacgtctcagccaccactcacaaggtcagagattacagaaagtaaaacatggcacagt
gtacctgaaaatatcagtgctcaaagcaagacagaatatgtggagaactgtattcatctg
acagacaaatttagatggtcatgttccagaatacatcttcaagggctggattttgaatac
acttggaaaaacttaggaagggtaactgtcaaccctgaaaagataataaaaatagagggc
aaatatggcatagaaagagcttttcttaatactgacatagactcaaatgagtgtcagctt
tttcaaccagaaggttctccccagtgcgttgattattgtttgcactctaaatcagaaacg
tgtggccttagcccagaagcagtaggtacctgtgctgacagcttgtcttctatacagatt
gatgcttgtgagtgtaatccggaacaaaacgagacttcatctgccctggactgcaagcca
gtgatcataaatgctgaagaacttataagtgatcagtacaaagctgaaaaagatctggaa
gcagacagattccctgatgcaactgatgttgaatttgacattgatgacactgagaatcta
acagcttgtcatgtaggttttcctgctgttgtggaaaacagagattgtgattgttctgta
aactgcaactccactggtagaatacagcagagaggtttgaaggagaatggctttgaatct
gaactgtcaagtatggagatcatggtaggggaacaatcagtagatgactcttctaacctt
gacttgggttggaaagtcccggaaaccccgttgcagccaggtagtagtaacactggggca
gagaacaaagagtccatgcagcaaaatacaagttgcaaaactgatgccttaaggagtgac
tctgagctagtaacaaatgagcatcctgcacagaaagaaaaggatgaagacagcatcttt
gctgttgaaacgacttctggatcagattatataaaccagagaaggcatttaatgactctt
ccagagttaaagcctgccctaattatagtatctgtagaacagaaaggactacagtgcaag
acactgaacgataaccttcctcctgaagtggtaactgaaacattgagtaacatagtgaac
aaggatttgacatctgctcatactgtcagcaaaactcatgatgagccagagagagttctg
agtgaaagctgtagctgtgaagagcaaattctggccatccaccccattcctcgtagtgca
aagctacttcctggtacagatacagctgaggaaaacccagaagtttcacaagagaaaaga
gagaaaacgtatgcagtttcatccttagggtttacttgtagtaattccatggtaacgagt
gcagaagtggaatttgggagtgttgctgtatcactggacaatgatacacttattgcagaa
agtcaggcagatggatgtgaagaagtgcttttaaattcacatagtggaagtggtgttatg
atctctgagaaagagccctatagaataaagactggttttgaatcagagatagaacagctc
agaaagtcacaggctgaaacaggagaaaaccaggtgtctaaagaagaggaattaaaagca
catcaaggaagagaggaaggctcatacatagctagtgcagtaacactggaagcgtgcagc
gtaagcaatttgtgtcagggggatggtgctaatgttgatcttcaagggcccagcgtgagc
tctgaacaatcaatagccaggcaagaaagtgaaggctgtaatggttcaaaggaacaaata
ggtatttgtgaagaaccttcttttagggaaggaaaagagggctctgctgcagaagacaca
gctagcccgagcaaagacagttcactgaatctagatgtgtctgatgtctttaactattct
gtgaaaagggaaacccataacacttgcatgctgggcctggataatataagtacctgcagc
actaacagcgaggagatggatgacaattcattgcatgtcatgggaagtaacagcagtctc
tataaagtgcaaaagccaacaaagaatggcaatagtgggaaagcttccaggttcttggta
ttctcaaaaatgacatctttcaggaaaagtaagactgccacagcagaaaatcagggaagt
agcagcttctttggctgcaaggcaaagttggaagaactggatgctgggaaagaggacgaa
gacactgaaagtttacagtctttcaagagttgttcatctggctcagtcttccacaggaag
gaaagctacacctctgagtactctgatgatgatgatttattctatgagagacctgcagga
ttattcaacagaatgagcctgaggaaggcttctggttctggtcggatactgatggaagat
gtagatacaaatttaacttcttccacactgactgctgtcaaatatgcagatcggcaagtt
tcaagttcatctgaaaacaacgagagtgaacctgtggaattctctgggactagaaaatca
ttccctgaaaatgaatacaaaagaaataaaacccctgagggtaagaagttcaggacaagg
ttagccttggcacacaaatccctctcaagtttatttgaatccaaatctccagagaaagaa
aatagcgagcaaagctcaagagtatcagtgaaaaatgacaaggagaaagccaaacttcgc
cagagcgcctggaaagcttttctaaaaagcaaggaggcagatggactaaaaaggcctgtc
ttagcaagtttatcacccacacaggagggtcttaatgcaactagcagccatgtaatgaga
acatcatcagtagagcgacaggatagttccaatggacacgtgttttttaaaccacaaaca
gctaatggctcctcaacagacaccaactattttgacacctctgttgagcctgttgatgtc
tcttcacctgcaggtatatggagaaaacgaatacagtcccatgacatgggcatgaagtac
tcacagagctcagactgtgatgaacaacaggaggctctgagcaacagtttaaatacttcc
ctagaggagtactggatgaaatctccatttagccccactgacttgccattgccatttaat
cagtcaagtccatcatgtccccagctctcaaattctgatggtaaagacatgccttgtagg
cccatgagtcctaaaccacagagcccacgatccatgtctcagcacaagagcttccgctat
cctggaagaatatgtgccacttcgatgatctctcttgggaacagctctgcagttgaaagc
agtttggaggctcctgagagaccaaagacactgaaacccagaggtagtctcttactctct
gtacactcatgggacaacgaataccagagggatgacagtggcataagcagtcaatcccag
atcagcttaaacacggcttcttccattagtgacatgctccgagatgaggagtctaaacag
caatgtcaaacaccacctgaaaagaggccaaatgagaaatgggttccccatcgcaaaagg
aggccctcccaggttccaccatccccacaccctatctccacccttgagagcaaagcctgg
aggctttccttccttgctccagatgaaaaagccaaggagattccagagaggaggaagaga
cctaaacccctctataagtgcttcagcttcgatgatgtttggatggagaggaaccagaaa
tggaagctagagaaggagacacagccagagagagggattcagttgcgacatctcccagag
gaccagttaaaaactggaataagtccatccatcatgtctgctgttgcttttgacatccta
ccactgaaactgcatcccttttcccagagcactccgacaggcttagactgtgtgggctgg
aagcggcgcatctcctctcccgtgatcactgatggggcactggataagacagctctaaca
gacgatgtgggaagtgaggaggacctgtatgaggacttccggagctccaaccaccgctat
ggccaccctgggggaggcggagagcagcttgccatcaatgagctcatcagcgatggcagc
gtggtgtatgcagaagccctctgggaccatgtcacgatggatgaccaagagctgggattc
aaggccggggatgtcattgaagtaatggatgctaccaacaaggagtggtggtgggggagg
attctggacagcgaaggctggtttccagccagctttgtacggctgcgagtaaaccaggat
gagcccatggaagattatcccctgaaggtagagggtggcaaagaggacgactccagcagt
ggcgcccgccgctttgggatggggcagaccaccaaagaccagatgaggaccaatgtcatc
aatgagatcataagcacagagagagactacatcaagcatctgaaggacatttgtgagggt
tacattaagcagtgccgcaaaagagccgacatgtttacagaagaacagctgaagacaatc
tttgggaatatcgaggacatttacagatgccagaagaagtttgttaaagcactagagaag
aaattcaacaaagaccacccacacttgagtgaggttggctcgtgcttcttggaatatcaa
acagagtttcagatatactctgaatactgcaacaaccacccgaatgcctgcatggagctg
tcccgcctcaccaaagtcaacaagtacgtctacttcttcgaagcctgccgcctgctgcag
aagatgattgacatctctctggatgggtttctgctgactcctgtgcagaagatctgcaaa
tacccactgcaactggcggagctgctcaaatacaccaacccccagcacagggattttaaa
gatgttgaagctgccttaaatgccatgaagaacgttgctcggctcatcaacgagagaaag
cggcggctggagaacattgacaagattgctcagtggcagagttcgatagaggactgggag
ggtgaagacgtcctcgttagaagctcggaactcatctattctggagaattaaccaaaatc
tcccaccctcaagccaagagccaacagagaatgttcttcctcttcgatcaccagcttgtc
tgctgcaagaaggacctcctgcgccgggatatcttgtattacaagagtcggatcaacatg
gatgacatggaaatactggatgtagaagatgggaaggacaaggacttcaacatcagcgtg
aaaaatgcatttaagttgcgctgccgagacactgaggaagtccacttgttctgtgcaaaa
aagccagagcagaaacagcgctggctgaaggcatttgagaatgaaaggagacaggttcag
ctcgaccaggagacaggtttttcaattacagaggtgcagaaaaagcaggccatgctgaat
gccagcaagcagcaccatactgggaagcctaaagctgtcaccaggccatactatgacttc
ctgatgcgtcagaagcatcccaccctgcctactatggtccctcagcagcaggtcttcatg
ctggcagagcccgcgcaagccctcgaacttctggcagaacatcagcaggctgacaccctt
ccggaaatgagggcagcccgtgtttgtgcctga
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integrated database retrieval system
