Strigops habroptila (Kakapo): 115612056
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Entry
115612056 CDS
T08851
Symbol
RXRG
Name
(RefSeq) retinoic acid receptor RXR-gamma isoform X1
KO
K08526
retinoid X receptor gamma
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03320
PPAR signaling pathway
shab04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115612056 (RXRG)
03320 PPAR signaling pathway
115612056 (RXRG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115612056 (RXRG)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
shab03310
]
115612056 (RXRG)
Transcription factors [BR:
shab03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
115612056 (RXRG)
Nuclear receptors [BR:
shab03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
115612056 (RXRG)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
115612056
NCBI-ProteinID:
XP_030351737
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Position
8:complement(42648329..42687299)
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AA seq
482 aa
AA seq
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MVESAEETGHRLEMQPGTQSYSLETGSFPHFYSPVHASSTSVSLSSSLSSGNSVDGHHNY
LEAPANASRALPSPMNAIGSPVNALGSPYRVITSSIGSHPVSLSSAPGMNFVTHASPQLN
VLNNVSSSEDVKPLPGLPGIGNMNYPSTSPGSLAKHICAICGDRSSGKHYGVYSCEGCKG
FFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRSRERSE
NEAESTSSGSEDMPVERILEAELAVEPKTEAYSDVNTESSTNDPVTNICHAADKQLFTLV
EWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSA
GVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSSPSEVESLREKVYATL
EAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQ
VT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggttgaatctgctgaagagacaggacacaggttggaaatgcagccgggcacacagtct
tattccctggagacgggctccttccctcacttctattcccctgtccatgccagctccaca
tctgtgagcctgtcgtcaagcctttcctcgggaaattcggtggatgggcaccacaactac
ctcgaggcccctgcgaacgcctcccgggcgctgccatcccccatgaatgccatcgggtct
ccagtgaacgcgctgggctcaccatacagggtgatcacatcctccattggctcgcacccc
gtctcactgtcttcagccccgggcatgaattttgtgacgcatgcaagcccacagctcaat
gtcttgaacaatgtcagcagctcagaggatgtcaaacccttgccaggtctcccggggatt
gggaacatgaattatccatctacaagcccaggatccttagccaaacacatctgtgccatc
tgtggggacaggtcctcagggaagcactacggggtgtacagctgtgagggctgcaaaggc
ttcttcaagaggacaatccggaaggacctgatctacacctgccgtgacaacaaggactgc
ctcatagacaaacgccaacgcaaccgttgccagtactgccgctatcagaagtgcctcgca
atgggcatgaagagggaagctgtgcaggaggagagacagaggagcagggagcggagtgag
aacgaggccgagtccacaagcagtggaagtgaggacatgcctgtggagaggatcctggaa
gctgagctggcagttgaacccaagacagaggcatacagcgatgtgaacacagagagctcg
acaaatgaccctgttaccaacatatgccatgcagctgacaagcagctcttcacacttgtt
gagtgggccaagcgaatcccccacttctctgacttgacactggaagatcaagtcattctc
ctccgggcaggatggaatgagctgctcattgcctcattctcccatcgctccgtgtcagtg
caagacggcatccttctggccacaggcttgcatgtgcaccgcagcagtgctcacagtgct
ggtgtgggctccatctttgacagggttttgacagaactggtgtccaaaatgaaagacatg
cagatggataagtcggagctggggtgcctgcgagccattgtcctgtttaacccagatgct
aagggtttgtccagcccttcagaagtggaatcactgagggagaaggtctatgccacgctg
gaagcctacacaaagcagaagtacccggagcagccagggcggtttgccaaactccttctg
cgtctgccggcactgcggtctattgggctgaagtgcctggagcacctcttcttcttcaag
ctgattggagacacccccattgacaccttcctcatggagatgctggagacaccccttcag
gtcacttga
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