KEGG T08851: 115612083

Strigops habroptila (Kakapo): 115612083

Entry

115612083         CDS       T08851

Symbol

POLR2D

Name

(RefSeq) DNA-directed RNA polymerase II subunit RPB4

K03012

DNA-directed RNA polymerase II subunit RPB4

Organism

shab Strigops habroptila (Kakapo)

Pathway

shab03020

RNA polymerase

shab03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:shab00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115612083 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    115612083 (POLR2D)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shab03021]
    115612083 (POLR2D)
   03400 DNA repair and recombination proteins [BR:shab03400]
    115612083 (POLR2D)
Transcription machinery [BR:shab03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     115612083 (POLR2D)
DNA repair and recombination proteins [BR:shab03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      115612083 (POLR2D)

SSDB

Motif

Pfam:

RNA_pol_Rpb4 Tfb4 Maelstrom

Other DBs

NCBI-GeneID:

115612083

NCBI-ProteinID:

XP_030351782

UniProt:

A0A672UEG9

LinkDB

Position

8:9393017..9397025

AA seq 142 aa
MAAGGSDPRAADVEEDASQLVFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEEAKALIPSLEG
RFEDEELQQILDDIQTKRSFQY

NT seq 429 nt +upstreamnt +downstreamnt
atggcggcgggcggcagcgacccgcgagcggcggacgtggaggaggacgcctcgcagctc
gtcttccccaaagaatttgaaactgcggaaactcttctaaattcagaagtacatatgctg
cttgagcatcgtaagcaacagaatgagagtgcagaagacgagcaggagctttcagaggtc
ttcatgaagaccttgaactacacagcgcgcttcagccgcttcaaaaaccgggaaaccatt
gccagtgtccgaagtttgctgctccagaaaaagctccataaatttgaattggcatgtttg
gctaacttgtgtccagagacagctgaggaggcaaaagcattgattcctagcctggagggc
cggtttgaagatgaggagttacagcagattcttgatgacattcagactaaacgcagcttc
cagtattaa

DBGET integrated database retrieval system