Strigops habroptila (Kakapo): 115612087
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Entry
115612087 CDS
T08851
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115612087 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115612087 (WDR33)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
115612087 (WDR33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
ASA1
Beta-prop_WDR90_POC16_2nd
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
CFAP251_N
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
eIF2A
WD40_RFWD3
Beta-prop_SCAP
Collagen
Beta-prop_NOL10_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
115612087
NCBI-ProteinID:
XP_030351801
LinkDB
All DBs
Position
8:9398874..9467350
Genome browser
AA seq
1317 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYAPGDDLEPNSLAVIPGMGIPEQLKIAMEQEQMGKDESNDIEMTIPGLDWG
MEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPLPPPPEPLNDRKEDIKLEEKKKT
QAEIEQEMAALQYTNPQLLEQLKIERLAQKQAEQVQPPPPGGSLHGPQPFPGQGPMSQMP
QGFQQPLPQQMPMNMPQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGAAGPQGFMGPQGPP
GPQGPPQGMPRPQDLHGHQGMQRHPGPHGPMGPPGPQGNSGPQGHLGPQGLPGSQTHLGP
QGPPGPQGHMGPQGPPGGQGMQGPPGPRGMQGPLPHGMQGAPGSQGMQGPISQGPLMGLN
PRGMQGPPGPRDNQGPTPQGMMMGHPQEMRGPHMQSGLLGHGPQEMRGLQGPPPQGTMLG
PPQELRGPQGQQGPPQGSLVGPQGNMQGPQGQPNPSRGPHPSQGPLPFQQQKTPLLGDGP
RPPFNQDGQNPGPPPLIPGLGQQGGQGRLGPHNQGPGLNKGDSRGPPNHHMGPLSDRRHD
QNSGGPDHGPERGLFRGGQEWGDGRDSRGMPDRRGPHPDFHDDFDRPDDFRDDFHPDKRF
GHRLREFEGRGGPPLQDEKWRRGGPGPPFPPDHREFEGGGSNRGPPGAWEGRRPSDDRYP
RDPEDARFRGRRDESFRRGGPSRHEGRGPRGRDGFPGPEDFGPDDAFDSPDENSRGRDHG
VRGRGRGAVRGGRKGLLPTPDEFPRFEGGRKPESWDGNREPGPRPDHPPHDRHSPANRER
ASSLQGMDMASLPPRKRPWHDGPGTSDHREMDAPGGPPEERGKGRGNSQRASKSGRSSSL
DGDHHDGFHRDEAFGGGPAGGNNPSRGGRSGSNWGRGNNMNSGQSRRGSSRGGGRGR
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggccacagaaattggctccccgccacgatttttccacatgccgaggttccagcaccag
gcgcctcggcagttgttctacaaaagacctgattttgcacagcagcaagcaatgcaacag
cttacttttgatggaaagcggatgagaaaagctgtgaaccgaaaaaccatagactacaat
ccctctgtaattaaatatttggagaatagagtatggcagagagaccagcgagatatgcga
gcaatccagcctgatgcagggtattataatgatttggtccctcctataggaatgctgaac
aaccctatgaatgctgtcacaacaaaatttgttcggacatctactaataaagtaaaatgc
ccagtgtttgttgttaggtggactcctgaggggagacgtttggtcactggtgcatctagt
ggagagttcactttatggaatggactgactttcaattttgaaacgatattgcaggctcac
gacagccctgtaagggctatgacttggtcacacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggacatggagcagatgtgaaatgtgttgactggcatcctacaaagggattagttgta
tcaggaagtaaagatagccaacagcccattaagttctgggacccaaagactggccagagc
cttgccacactacatgctcataaaaacacagtgatggaggtgaaactgaatctgaatggc
aactggctgctaacagcttctcgtgatcatctctgtaagctctttgatattcgtaatctg
aaagaagaacttcaggtcttcaggggtcataaaaaggaggccacagctgtggcctggcat
cctgttcatgaagggctgtttgccagtggagggtctgatggctctttgttattctggcat
gttggggttgagaaggaggttggtggaatggaaatggcccatgagggaatgatctggagt
ctggcgtggcatccccttggacacattctctgttcgggctcaaatgatcataccagcaag
ttctggactagaaatcggcctggagataaaatgcgagatcgttacaacttgaatctgctg
cccgggatgtcagaggatggcgtggaatatgctccaggagatgatctagaaccaaacagc
ctagcagttattcctgggatgggaatacctgaacagttgaaaatagccatggagcaagag
cagatggggaaagatgagtccaatgacattgaaatgacaatcccaggactggattgggga
atggaggaagtaatgcaaaaggaccaaaagaaggtgccacagaaaaaagtgccctatgca
aaaccaataccagcacagtttcagcaggcatggatgcagaataaagttcctctgcctccc
ccacctgagccattgaatgatagaaaggaagatattaagctggaggagaaaaagaagaca
caggcagagattgaacaggaaatggcagcacttcagtacacaaacccacaacttttggag
caattgaagattgagagactcgcacagaagcaagctgagcaagtgcagccaccacctcca
ggaggctctcttcacggaccccagccttttccaggacaaggcccaatgtcacagatgcct
caaggatttcagcagcctcttcctcagcagatgccaatgaatatgcctcagatgggacct
cctggtccacaaggacagttcagacctccgggaccccaagggcaaatgggacctcagggt
cctccattacaccaaggagctgcaggtccacaagggttcatgggaccacaaggacctcca
gggccccaagggcctccgcaaggaatgccacggcctcaggatttacatggacatcaagga
atgcagagacatccaggccctcatggaccaatggggcctccaggcccacagggtaattct
ggcccacaaggccacttaggaccacagggtctacctgggtctcagactcatttaggacca
cagggtccacctggcccacaaggtcacatgggtcctcaaggtccccctggtggtcaagga
atgcaagggccacctggtccccgtggaatgcaaggacctcttcctcatggcatgcaagga
gctccgggatctcaagggatgcaaggccctatatctcaagggcctttgatgggacttaat
ccaagagggatgcagggtccaccaggacccagagataaccagggacctactccacaaggg
atgatgatgggtcatccgcaagaaatgagaggtcctcatatgcaaagtggtttactagga
catggtccccaggagatgagaggtctccagggacccccgcctcaaggtacaatgttagga
ccaccacaagaattgcgtgggccacagggccagcagggacctccacaaggctctttagta
gggcctcaaggaaacatgcaaggacctcagggacaaccaaacccttcaagggggccgcat
ccttcccagggccctctgcctttccagcagcagaaaacacctctgttgggtgacgggcct
cgtcccccatttaatcaggatggacagaacccaggtcctccaccactgataccaggactg
gggcagcagggaggacaaggtcgtcttggccctcacaaccaaggacctggtcttaataaa
ggtgactcccgtggtccaccaaaccatcacatgggccctctctcagatagaaggcacgac
cagaacagtggtggtcctgatcatgggcctgagagagggttgtttcgaggtggccaggag
tggggtgatggtagagacagcaggggcatgccagatagacgaggacctcacccagatttc
catgatgactttgatcgaccagatgacttccgtgacgacttccatccagataagagattt
ggccatcgattacgggaatttgaggggagaggaggcccaccattgcaagatgagaaatgg
agacgaggtggacctgggcctccctttcctcctgatcacagggaatttgaaggagggggt
tcaaaccgtgggcctcctggtgcttgggaaggacgcagaccttcagatgatagatatcca
cgggatcctgaggatgcacggttccgaggaagacgagatgagagcttcagaagaggaggc
ccctcaagacatgagggccggggacccagggggagagatggctttcctggccctgaagat
tttgggccagatgatgcttttgactctccagatgaaaactcaagaggaagggaccatggt
gttcgggggcgaggtcgtggtgctgttagaggaggccggaagggtttacttcctactcca
gatgaatttccacgctttgaaggagggcggaaaccagaatcctgggatggaaacagagaa
ccaggtcctcgtccagatcaccctcctcatgacaggcattctccagctaacagagaacgc
gcttcttcgctccagggcatggatatggcctcactgccaccacgtaaacgtccctggcat
gatggaccagggacctctgaccacagagaaatggatgctccaggtggacctccagaagag
aggggcaaaggacgaggaaattcacagagagcgtcaaaatctgggagatccagttcttta
gatggagaccatcacgatggattccacagagatgaagcttttggtggaggccctgcagga
ggcaataacccttctcgaggaggaaggagtggaagtaactggggaagaggaaataacatg
aactctggtcaatcaagaagaggatcatctaggggtggtggaaggggccgatag
DBGET
integrated database retrieval system
