KEGG   Strigops habroptila (Kakapo): 115612180
Entry
115612180         CDS       T08851                                 
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
shab  Strigops habroptila (Kakapo)
Pathway
shab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115612180 (PRPF38B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:shab03041]
    115612180 (PRPF38B)
Spliceosome [BR:shab03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    115612180 (PRPF38B)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    115612180 (PRPF38B)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 115612180
NCBI-ProteinID: XP_030352044
UniProt: A0A672UMK0
LinkDB
Position
8:13773383..13783066
AA seq 547 aa
MANNSPAVGAGNCQGQQAAQHQPGAVPPAQQQLQSGAPKPAASGKQGNVLPLWGNEKTMN
LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR
GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDW
FESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKAIDQQIKSRP
RKIKKDGKEGMEEIDRHVERRRSRSPRRSISPRRSPRRSRSRSHHREGHGSSSFDRELER
ERERQRLEREAKEREKERRRSRSTDRTLERRRSRSRDRYRSRSRSRDRKGDRRDRDRERE
KENERSRKKERDYDKERGSEREKDRSRERSKERKSKGDTEERRHKDDKDDKKHRDDKRDS
KKERKHSRSRSRERKHRSRSRSKNTGKRSRSRSKEKSSKHKNESKDKSNKRSRSRSRGRT
DSVEKSRKRDQSPSKEKPRKRSRSKERSHKHDHSDSKDHSEKHDRRRSQSTEQESQEKQQ
KNKDETV
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggccaacaacagccccgccgtcggcgctgggaactgccaggggcagcaggcggcccag
caccagcctggcgccgtcccgccggcccagcagcagctgcagagcggagcccccaagccg
gcggcctcaggcaagcagggcaacgtgctgccgctgtggggcaacgagaagaccatgaat
ctgaaccccatgatcctcaccaacatcctctcgtcgccctacttcaaggtgcagctctac
gagctcaagacttaccacgaagtggtggacgagatctacttcaaggttacacatgttgaa
ccatgggaaaaggggagcagaaaaacagcaggccagacagggatgtgtggaggggtgcgt
ggtgttggaactggaggaattgtgtctactgccttttgtctgctctacaaattatttaca
ctgaaactcactcgtaagcaagtgatgggccttataactcatacagactccccatatatt
agggctcttggatttatgtatattaggtacacacagccacctacagatctatgggactgg
tttgaatcctttcttgatgatgaagaggacctggatgtgaaggcaggtgggggttgtgtt
atgaccatcggggagatgcttcgttccttcctcaccaagcttgaatggttttccacgttg
tttccaagaattcctgtgccagtccagaaagccattgaccagcaaattaaaagcagacct
agaaaaatcaagaaagatggcaaggagggaatggaagaaatagaccggcacgtggaacgt
agacgttcaaggtctccaagacgatccatcagtcccaggaggtctcccagaagatccaga
agcagaagtcatcatcgggaaggccatggatcatctagctttgatagagaactagaaaga
gaaagagaacggcaacgattagaacgtgaagctaaggagagagaaaaagaaaggcggaga
tctcgaagcaccgatcgcacactagaacggaggcgaagcagaagcagggacagatacaga
agccgtagtcgaagtcgtgacaggaaaggagatagaagagacagggatagggagcgagag
aaagagaatgaacggagccggaaaaaggagagagattatgataaggaaagaggtagcgag
agggaaaaagatcgctctagagaaagatcaaaagaaaggaaaagtaagggtgatacagaa
gagagaagacacaaagatgacaaggatgacaagaaacaccgggatgacaagagggattcc
aaaaaagagagaaaacatagtagaagtcgaagcagggaaagaaagcacaggagtaggagc
cgaagtaagaatacagggaagcgcagcagaagcaggagcaaagagaaatcaagtaaacat
aaaaatgaaagtaaagataagtcaaataaacgaagtagaagcagaagcagaggaagaaca
gatagtgttgagaagtccagaaaacgagaccagagtcccagcaaagaaaagcctagaaag
cgtagcagaagcaaagaacgttcccacaaacatgatcacagcgacagcaaggaccattcg
gaaaaacacgaccgtcgaaggagccaaagtacggaacaagagagccaagaaaagcaacag
aaaaacaaagatgagactgtgtga

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