Strigops habroptila (Kakapo): 115612492
Help
Entry
115612492 CDS
T08851
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04140
Autophagy - animal
shab04148
Efferocytosis
shab05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115612492 (VPS41)
04148 Efferocytosis
115612492 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115612492 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115612492 (VPS41)
Membrane trafficking [BR:
shab04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
115612492 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
WD40_Prp19
zf_RING_Vps8_fungal
Beta-prop_EML_2
Beta-prop_HPS5
TPR_PEP5_VPS11
Vps39_1
ANAPC4_WD40
zf_RING_Vps8
WD40_WDHD1_1st
Frtz
Beta-prop_RIG_2nd
zf-RING_5
Beta-prop_IFT140_2nd
TPR_GEMI5
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
115612492
NCBI-ProteinID:
XP_030352674
UniProt:
A0A672UCW1
LinkDB
All DBs
Position
1:150946474..151046047
Genome browser
AA seq
854 aa
AA seq
DB search
MAEAEEKETRSTEESTDESEEDESEEEPKLKYERLSNGVTEILQKDAASCMTVHEKFLAL
GTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSAEEFH
ETFDCPIKIVAVHPHFVRSHFKQFVTGGKKLLLYERGWMNRWKPSVLHEGEGNIRNVKWR
GHLIAWANNMGVKILDMISKQRITNVPRDDISLRPDMYPCSLCWKDNLTLIIGWGNSVKI
CSVKERHASEMRDLPNRYVEIVFQFDTEFYISGLAPLCDQLVVLSYVKEISEKTEVECCA
RPRLDIVQPLPESCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIISPRDVVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKTIKKHKILDIGLAYINHLVEKGEYDLAARKCQK
ILGKNTELWEFEVYKFKEIGQLKAISRYLPRRDPVLKPLIYEMVLHEFLESDYEGFATLI
KEWPGDLYNNTIIVQAVVDHLKKDPQNRTLLRTLAELYTYDQRYGRALEIYLTLRHKDVF
QLIHKHNLFSSIRDKIVLLMDFDSEKAVDMLLDNEDKISIDRVVEELENRPELQHVYLHK
LFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELRDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
KGVLVDEENICESCLSPILPSDASKSFNVVVFHCRHMFHKECLPVSNTVSCVQFCNICSA
KHRGPGSAILEMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagccgaggagaaggaaaccaggtctactgaggaatcaacagatgaatctgag
gaagatgagagtgaagaagaaccaaagctgaagtatgaacggctttctaatggagtcacc
gaaattctccagaaggatgcagccagctgcatgacagtccatgaaaagtttttggcactg
ggaacacattatggcaaagtttatttgcttgatgtccaggggaacatcacacagaagttt
gatgttagcccagtgaagataaatcagatcagcctggatgaaagtggagaacacatgggt
gtttgctcagaagatggcaaggtgcaggtgtttggactgtattcagcggaagagtttcat
gagacgtttgactgtcctattaagattgttgctgttcatcctcattttgtaagatcccac
ttcaagcaatttgtaacaggaggaaaaaagttgctgttatatgagagaggctggatgaac
agatggaagccttcggttttgcatgaaggggaaggaaatataagaaatgtaaaatggaga
ggacacttgattgcttgggccaataatatgggtgtgaagatacttgacatgatctccaag
caaagaattaccaacgtgcctcgagatgacataagccttcgtccagatatgtatccctgc
agcctttgctggaaggataatttaacgctgattattggctggggaaattcagtaaagatt
tgctcagtgaaagagcggcatgccagtgaaatgcgtgaccttccaaaccgctatgtggaa
atagttttccagtttgacacggaattctatatcagtggactcgcccctctctgtgaccag
ctcgttgtcctttcatatgtaaaggagatttccgaaaagacggaagtggagtgttgtgca
aggcctagactggatatcgtacaacccctaccagagtcctgtgaagagatctcttctgat
gcactaacagtacgaggatttcaggaaaatgaatgtagagattatcatttagagtattca
gaaggggaatcactcttttatatcatcagcccaagagatgtggttgtggctaaagagcgg
gaccaagatgaccacattgactggcttcttgaaaagaagaaatacgaagaagctttgatg
gcagctgagatcagtcagaaaactataaaaaagcacaagattttggacattggcttagcc
tatataaatcacctcgtggagaaaggagagtatgacctggctgctcgaaagtgccagaaa
attcttggcaaaaacacagaactctgggaatttgaagtttacaagtttaaagaaataggt
cagcttaaggcaattagtcgttatttgcccagacgggatccagttttgaaacctctgatc
tatgaaatggtcctgcatgagtttttggagagtgactatgaggggtttgcaaccctgata
aaagagtggcctggagatctgtacaataacacaatcatagttcaagctgtagtggatcac
ctgaagaaagatccacagaacaggactttgctacgaacgcttgcagaattgtatacttat
gaccaacgctatggcagagccctagaaatctacttaactctgaggcacaaggatgtcttc
cagttgatccacaagcacaatcttttcagttcgatcagagacaaaattgtcctactcatg
gattttgattcagagaaagcagtagacatgcttttggataatgaagataaaatttctatt
gacagagttgttgaagaactagaaaacaggcctgagctacagcatgtttatttgcacaag
cttttcaaaagagaccaccataaaggccaacgatatcacgagaaacagatcagcctttat
gctgaatacgaccgtccaaacttactgccgtttctcagagacagcacacactgtccccta
gagaaggctcttgagatctgccaacagaggaactttgtagaagagacagtctatcttctg
agcagaatgggaaatagccgcagtgccttaaagatgataatggaagaattgcgagatgta
gataaagcaattgaattcgccaaggaacaagatgatggagaactttgggaagatctcatt
ttatattctatcgacaaaccaccttttattactggcttgttgaacaatattggaacccat
gttgatcccattctgttgatccaccgcattaaggaaggcatggagattcctaatttgaga
gactcgctagtgaaaattcttcaggactacaacttgcagatcttgctgcgggaaggttgc
aagaagatccttgttgctgattctctttcgttgttaaagaagatgcatcggactcagatg
aagggcgttctagtagatgaggagaacatctgtgaatcatgcctgtctccaatacttcct
tcagatgcatccaagtccttcaacgtggtagtgttccactgcagacacatgtttcacaaa
gagtgcctcccggtatctaacacagtatcttgtgtccagttctgcaacatatgcagtgcc
aagcaccgagggccaggaagtgcaatcctggagatgaagaaatag
DBGET
integrated database retrieval system
