Strigops habroptila (Kakapo): 115612632
Help
Entry
115612632 CDS
T08851
Symbol
DMXL2
Name
(RefSeq) LOW QUALITY PROTEIN: dmX-like protein 2
KO
K24155
rabconnectin-3a
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115612632 (DMXL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115612632 (DMXL2)
Membrane trafficking [BR:
shab04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115612632 (DMXL2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
115612632 (DMXL2)
RAVE complex
115612632 (DMXL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_IFT140_1st
EIF3I
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
115612632
NCBI-ProteinID:
XP_032776053
LinkDB
All DBs
Position
9:12416212..12469979
Genome browser
AA seq
3087 aa
AA seq
DB search
MHLHQVLTGAVNPGDNCYSVGSVEDIPFTAYGSGCDIVILADDFECVQIIPGAKHGNIQV
SCVECSQQQGRIAASYGNAVCIFEPLGINSHKRNSQLKCQWLKTGQFFLSSMTYNLAWDP
QGNRLLTATDFLQLWAPPSSDILEEDDDPDNQVKDDKVLPVLNDWKCVWQCKTAVSVHLM
AWSPDGEYFATAGKNDCLLKVWYPMTGWKSSLLPQENEEKKKSSGVVNFSFVYLAHPRAV
TGFSWRNISKYMPRGLVCNVLLTSCLDGICRLWAETLLPEDTLLGEQICETSTSSISSTV
SQSGKQKDKIQHALETIHELKNMRKGQRRSSVLVTHTDALPDQQGTHEVQRHISHHANAL
GHFHIAASINPNTDIPSVLAGTAFNIDEGNGGFVVHWLNNKEFNFTSSIEVFMQHLRKIS
EQVEEDFDVQAEKEEEMEEKEKGLHMKLDHELSMDRESETGTGTGSSEHEDGEREGSPKT
SLLTGPCMPLPTVLLDQKIELLVTEWNRNPDMLFTIHPIDGTFLVWHVKYLDEYTPGIFR
QVQVSFASRIPVAFPSGDASSLSKNIMMYACPVFVKDDSNVVYQKTVDFPDKTLANKGSS
FDQDSANVNIISPKVMMVSKHIDGSLNQWAVTFADKSAFTTVLTVSHKFRYCGHRFHLND
LACHSVLPLLLTSSHHNALLTPESDSSWDSDMINRKMDPIKHVKGSSRQQLKNAATRTFH
DPNAIYSELILWRVDPIGPLSYTGGVSELARINSLHTSAFSNVAWLPTLIPSYCLGTYCN
SASACFVASDGKNLRLYQAVVDARKLLDELSDPESSKLIGEVFNIVSQQSTARPGCIIEL
DAITNKCRSNTQLLHVFQEDFILGYKPHKEDVEGKETEIFFQPSQGYRPPPFSEKFYLVV
IEKDSNGCSVLQMWHLHLKSVQACLAKPTEATSPENKLSVPVQKTVVSSPNVSPGISPIP
RSSSIANLQTASKLILSSRLVYSQPLDLPAGVEVIRATPSAGHLSSSSIYPVCLAPYLIV
TSCSDNRVRFWRCTVETDLNSKNEERETYHWRKWPLMNDEGEDNSSTVSIVGRPVAVSCS
YTGRLAVAYKQPIQHNGFVSKEFSMHVCILECESTGGSEWVVEQTIHLDDLVKVGSVLDS
RVSVDSNLFVYSKSDAFLNKDKYLVPSIKHLVHLDWVSKEDGSHILTVGVGANIYMYGRL
SGIVTDQTSSKEGVAVITLPLGGSIKQGIKSKWVLLRSIDLVSSVDGTPSLPVSLSWVRD
GILVVGMDCEMHVYAQWKHAIRFGDGENDVFTTEDSTTQDPLKTSLIAKKTSIIDRAGIV
DDVFGTPTVIQDGGLFEAAHVLSPTLPQYHPTQLLELMDLGKVRRAKAILSHLVKCIAGE
VAIVKDTEAGEGTGPKRHLSRTISVSGSTAKDTITAGKDGTRDYTEIDSIPPLPLYALLA
ADQDATFVSEETSKIPQGSEDHAKRKTEDQYSDLFQIPSVTTEDFIDFEPEKRESKSKVI
NLSQYGPTYFGQEHASVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSTELDENRDKNY
SGRDTLDECGLRYLLAMRLHTCLLTSLPPLYRVQLLHQGLSTCHFAWAFHSEAEEELISM
IPAIQKGDPQWSELRAMGIGWWVRNINTLRRCIEKVAKASFQRNNDALDAALFYLAMKKK
AVVWGLFRSQNDEKMTAFFSHNFSEDRWRKAALKNAFALLGKQRFEQSAAFFLLAGSLKD
AIEVCLEKMEDIQLAMVIARLYESEFETSVTYTSILYEKILGCQKDGTGFSCTKLHSDPF
LRSIAYWIMKDYTRALDTLLEQTPKDDDENPVIVKSCNPVVFSFYNYLRTHPLLIRRYFS
SPEGTLATLGLKTEKSFVDKINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVRKKST
VAAESESPSTPIQAGVSDSKVLRDGAGSGDIDWSKPISTSFALENTVESSAQFDWSQPAV
KFDDEPLTLDWGEDKNGSDEEEKDVGIIMKNSKSDSKSGEDDERTSDTNIPQTPHEETCD
AGDTEVDVIAEQLKFRACLKILMTELRTLATGYEVDGGKLRFQLYNWLEKEIAAMHEICN
HDTGGKDYCKTYTKVNGDLLDQDDIMDKPDIVHMNGNQIERRRLQAKREHAERRKWWLQK
NQALLRVFLSYCSLHGAQGGGLASVRMELKFLLQESQQETTVKQLQSPLPLPTTLPLLSA
SIASTKTVIANPVLYLNNHIHDILYTIVQMKSPPHPHIEDVKVMKSVYTLHSLAASTFCI
HFINALCDSHIFSLQADANQFTGMVYQGLLLSDRRRLRTESIEEHATPNSSPAQWPGVSS
LINLLSSAQDEDQPKLNILLCEAVVAVYLSLLIHALATNSCNXIIRLAAHPLNSRMWAAV
FGGGVKLLVKPRRQSEIFHNISFSNYLNLAPPLPSEEMDKHRRRFNMRMLVPGRPVKDST
VPPPVPAERPSYKEKFIPPELSMWDYFMAKPFLPLSDSGVIYDSDESFHSDEEEDDDDAF
LSDTQIQEHKDANSYSWALLHLTMVKLVLHNIKNFFPIAGLEITDLPVTSPLGIAVIKNL
EHWEQILQDRMDQFEGPPPNYINTYPSDIGIGAGPAILRNKAMIEPENTPFKSKDYSALP
AKRLWHFLVKQEILQETFIRYIFTKKRKQSESVEDRVEQVKQNCVAEDHKNKVEADLGYP
GGKAKIIHKESDMIMAFAVNKANSNEIVLASTHDVQELDISALLAAQSFIWIGEEYDRES
KSSDDIDFRGSTTTLAQSAASSFGATQIQPSSSMPWLGSGQTSTGAGVLIKRNLNNVKRM
ASHPVHQYYLTGAQDGSVRMFEWTRPQQLVCFQQAGNARVTRMYFNSQGNKCGVADGEGF
LSIWQVNQTTSNPKPYLSWQCHSKTTSDFAFITSSSLVATSGQSNDNRNVCLWDSLASSG
NNLIHAFTCHDHGATVLQYAPKHQLLISGGRKGYICIFDIRQRQLLYTFHAHESAVKALA
LDPSEDYFVTGSAEGNMKVWRLTGYNLIHSFKNEHAKQSIFRNIGAGVTQIETVQGNRIF
SCGADGTLKMRVLPNAFNVPSSISDTL
NT seq
9264 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcaccaggtgctcaccggcgccgtcaaccccggggacaactgctactcggtg
ggcagcgtggaggacatcccctttacggcatatggctctggttgtgatattgttattctg
gcagatgactttgaatgtgtgcaaattattcctggtgctaaacatggaaatatccaggtc
agttgtgtggagtgctcccagcaacaaggcaggattgcagcatcatatggaaacgctgtt
tgcatttttgaaccgcttggtataaattctcacaaaagaaatagtcaactaaagtgtcag
tggcttaaaactgggcaattcttcctcagttctatgacttataacctggcatgggatcct
caaggtaacaggctgctgacagcaactgactttttgcaattgtgggcccctccatctagt
gacattctagaagaagatgatgatcctgacaatcaggtcaaagatgataaagttctccca
gttctaaatgactggaaatgtgtctggcagtgcaagactgctgtatcagtacatttgatg
gcatggtctcctgatggtgaatattttgcaacagctgggaaaaatgactgccttttaaag
gtttggtatcctatgactggttggaagtcatctcttctgccccaagagaatgaagaaaag
aaaaaaagctcaggggttgtcaacttctcatttgtttatttggcgcatcctcgagcagtg
acaggattttcatggcgtaacattagcaagtacatgcccaggggtttggtctgtaacgtg
ttactcacatcttgtcttgatggcatctgtcggctgtgggcagagacattgttaccagaa
gatactcttcttggtgagcagatctgtgaaaccagcacttctagcattagcagcactgtc
tctcaatctggaaagcaaaaggacaagatacagcatgcactagagacaattcatgagttg
aaaaatatgagaaaaggacaaaggagatcttcagttcttgttacccacacagatgcattg
ccagatcaacagggtactcatgaagttcagcgtcacatttcacatcacgcaaatgcactt
ggtcacttccatatagcagcaagcatcaaccctaatacagatattccatcagtcttggct
ggaacagcttttaatatagatgaaggaaatggaggcttcgttgttcactggttgaataat
aaagaatttaattttacatcctctattgaagtatttatgcagcatctaagaaaaatttct
gaacaagtagaagaagattttgatgttcaggctgaaaaggaagaagaaatggaagaaaaa
gagaaaggtttacatatgaaattagatcatgaattgtctatggatagagagtcagagaca
gggactggtacaggctcttcagaacatgaagatggagaaagagagggaagccccaaaaca
tctctactaacaggcccatgcatgcctcttccaacagttttgttagatcagaaaattgag
ttgctcgtaactgaatggaacagaaatccagatatgctttttactatccatcccattgat
ggtacctttttggtgtggcatgtgaaatacttagatgaatacactccaggcatctttcgg
caagttcaggtttcatttgcttctaggattcctgtcgcatttccatcaggagatgctagc
tccctgagcaaaaatattatgatgtacgcttgccccgtctttgtaaaagatgacagtaat
gttgtctatcagaagacagtggactttccagataagactctagcaaataaaggatcaagc
tttgaccaggatagtgcgaatgtgaatataatttctcccaaagtaatgatggtttccaaa
catatagatggctctctaaatcagtgggcagttacttttgctgataaatcagctttcact
actgtgctaactgtatcacataaatttaggtactgtggtcaccgttttcatctcaatgat
ctagcttgccattctgttttaccattactgctaacatcttctcatcataatgctctatta
actcctgaatcagacagttcctgggactctgatatgataaacagaaaaatggatccaatt
aaacatgtgaaaggttcttctaggcagcagcttaaaaatgcagcaacccgtacattccat
gacccaaatgcaatctatagtgaactgattctatggcgtgtagaccctataggaccttta
tcatacactggaggagtatccgaattggctcgaattaactctcttcatacctccgctttc
tctaacgtagcctggcttccaacacttattcccagctattgccttggtacatactgcaac
tctgctagtgcttgctttgttgcatctgatggcaaaaacttgagactctatcaagctgtt
gtagatgcacgaaaacttctagatgaattatctgaccctgaatcatctaaacttattggg
gaagtgtttaatattgtgagccaacaatctactgctcgaccaggatgcattattgaactt
gatgcaataactaacaaatgtcgctcaaacacacaattgcttcatgtctttcaagaagac
ttcattttgggatacaaaccgcataaggaagatgtggaagggaaagaaactgagatattt
ttccagccatcacaagggtatcgtccaccacctttctcagagaagttctacctagtagta
attgaaaaagatagcaatggctgctctgttcttcagatgtggcatcttcatctcaaatct
gtgcaagcctgtttagcaaagccaactgaagctacttcaccagagaataagcttagtgta
cctgtgcaaaagactgtagtttcttctccaaatgtatcacctggcataagtcctattcca
cgatcttcatcaattgctaatcttcagactgctagtaaactcattctgagctccaggctt
gtgtatagccaacctctggatcttcctgctggtgtagaagtaataagagcaactccttca
gcaggtcacctgagttcttcatcaatatacccagtctgccttgcaccttacctgatagta
acatcatgttcagacaacagagtgcggttctggagatgtactgtagagacagacctaaac
agcaaaaatgaagaaagggaaacatatcattggaggaaatggcctttaatgaatgatgaa
ggagaagacaacagcagtacagtgagcattgtaggaaggccagttgccgttagctgttct
tacacaggacgtcttgcagtagcatacaaacaacccatacagcataatggttttgtttcc
aaagaattttccatgcatgtttgtatacttgaatgtgagtctacaggaggatcagaatgg
gttgtggaacagacaattcatctggatgatttagttaaggttggaagtgtacttgattca
agagtcagtgtagatagtaatttatttgtttacagtaaatcagatgcttttttgaataaa
gacaaatacctggtgcctagtatcaagcatttggtgcatttggactgggtatcaaaagaa
gatggttcacatatattgacagttggagttggtgccaacatctacatgtacggaagactt
tcaggaattgtaacagatcaaactagcagcaaagagggagtagctgtcattactttacca
ctaggtggtagcataaaacaaggtataaagtcgaagtgggtgttgcttagatcaattgat
ttggtatcatctgtagatggcactccttcactgcctgtttctctgtcctgggtgagagat
ggtatactggtagtgggaatggactgtgaaatgcatgtttatgcccagtggaaacacgct
atcaggtttggtgatggagaaaatgatgtttttactactgaagactcaacaacacaagat
ccactcaaaacaagcctgatagcaaagaaaaccagtataattgatagggcaggtattgtg
gatgatgtttttggcactccaactgtaatacaggatggtggcctttttgaagctgctcat
gttctttcacctactctaccccagtatcatccaacccagttattagaacttatggatctg
ggtaaagttcgccgagccaaagccattctatcgcatttagttaaatgtattgcaggagaa
gttgcaattgttaaagacacagaagctggagaaggaactggtcctaaacgccatctttct
cgcaccattagtgtaagtggtagtactgcaaaggataccatcacagctggaaaagacggt
actcgagactatacagagatagactcaattcccccattgccactgtatgcgttgcttgct
gcagatcaagatgccacttttgtttctgaagaaacttctaaaatacctcagggctctgaa
gatcatgcgaagagaaaaactgaagatcagtactcagacctattccaaattccgtctgtt
acaactgaagactttattgattttgagcctgaaaagagggagagtaaatccaaagttatt
aatctgtcacagtatggtccgacttactttggccaagaacatgctagtgttctgtcaagc
cacctgatgcattcaagtctgccaggcctcactcgactggagcagatgttccttgtagct
ttggcagacactgtggccacaacaagcactgaactagatgagaacagagataagaattac
tcaggaagagatactttagatgaatgtggcttacgatacttgttggctatgcgcttgcac
acctgcctcctgacatcactcccacctctgtatcgagttcagctgcttcaccaaggcctt
tctacttgccattttgcgtgggcttttcattctgaggctgaggaggagttgatcagtatg
attcctgctatccagaagggagaccctcagtggtctgaattaagagctatgggtattggt
tggtgggtcaggaatatcaacacactccgaaggtgcattgagaaggttgcaaaagcttca
tttcagaggaacaatgatgctttagatgctgcacttttttaccttgctatgaagaaaaag
gcagtagtgtggggtctgtttaggtcccagaatgatgagaagatgactgcctttttcagc
cacaacttcagtgaagatagatggcgcaaagctgctttaaaaaatgcttttgctttgttg
ggcaaacaacgctttgaacaatcagctgcatttttcctgctagcaggttcactgaaagat
gctatagaggtttgtcttgagaaaatggaagacatccagttggctatggttattgctcgt
ttatatgaatcagagtttgaaacctccgtcacatacacctccattctttatgaaaagatt
ttgggctgccaaaaggatggaactgggttcagctgtactaaattgcattctgatccattt
ctgagaagcattgcatactggataatgaaagattacactagagcactggacacgttattg
gaacaaacacctaaagatgatgatgaaaacccagttatcgtcaagtcgtgcaatcctgtg
gtgttcagtttttacaattatcttcggacccaccctttgctcatccgaagatacttcagt
tcaccagaagggactttggccaccttaggtctaaaaactgagaaaagctttgttgataaa
attaatcttatagaaagaaagttattcttcactactgcaaatgctcattttaaagtgggc
tgccctgtactagctcttgaagtcctttccaaaattccaaaagtaagaaaaaagtctacg
gtagctgcagagagtgagtcacctagtactccaatacaggctggtgtttcagattccaaa
gtcctaagggatggtgctggaagtggtgatatagactggtcaaaaccaatttcaacttcc
tttgcattggaaaatactgttgaatcttcagcacagtttgactggagtcagccagccgta
aaatttgatgatgagccccttactcttgactggggtgaagacaaaaatgggtcagatgaa
gaggagaaggatgttggtataataatgaaaaactcaaaatctgattctaagagtggagaa
gatgatgagagaacctcagacaccaacatcccacaaacaccacatgaggagacttgtgat
gcaggagacactgaggttgatgttattgctgaacaactgaagttcagagcctgtttgaag
atccttatgactgagctgaggactttggctacaggttatgaagtagatggaggaaagctc
agatttcagctgtacaactggcttgaaaaagagattgctgctatgcatgaaatatgcaac
catgacacagggggcaaagactattgtaaaacgtataccaaagtaaatggggatctactt
gatcaagatgatattatggataagccagacattgttcatatgaacggcaaccagatcgaa
agacggaggttacaagcaaaacgagaacatgctgaaagacgaaagtggtggctgcagaag
aatcaagctcttctaagagtttttctaagttattgtagtcttcatggggcacaaggtggt
ggtttagcatctgtaagaatggagctgaagttcttgctgcaagagtcacagcaggaaact
actgtaaaacagcttcagtctcctcttccactacccacaacactaccgttgctttctgca
agcatagcatccacaaaaacagtgatagctaatcctgtgctatatttaaacaaccacatc
catgatattctttacactattgtgcagatgaaatcaccaccacatcctcatattgaagat
gtcaaggtaatgaaaagcgtgtacacacttcattctttagcagcttccactttctgcatc
cattttatcaacgcattatgtgacagccatatatttagccttcaagcagacgcaaatcag
tttacagggatggtttatcaaggactgcttttgagtgatcgacgcagactgaggacagaa
agcattgaagagcatgcaactccaaactcatctcctgctcagtggcctggcgtgagttca
cttataaatctcttaagttcagctcaggatgaagatcaaccaaagttaaacatcctactt
tgtgaagctgttgtagctgtctacctgagtctccttatacatgcccttgcaactaattca
tgtaatnngattattcgactagcagctcatcctttgaacagtcgaatgtgggctgctgtt
tttggaggaggagtgaaacttcttgtaaaacctcgaaggcagtcagaaatattccataac
atcagcttttcaaattacctgaatttagcaccacctcttccgtcagaagaaatggataaa
catcgccgtcggtttaatatgagaatgctagtgccgggaagaccagtaaaagatagcact
gtaccaccacctgtacctgcagaaagaccctcttacaaagaaaagtttatccctccagaa
ctcagcatgtgggactactttatggcaaagccatttcttcctctctcagacagtggtgtt
atatatgactccgatgaaagctttcacagtgatgaggaggaagacgatgatgatgccttc
ctctctgatacacagatccaggaacacaaagatgccaattcttacagctgggctcttctg
catctgacaatggtaaaattagttctgcacaatattaagaacttctttcccattgctggt
ctggaaatcactgatctgcctgtaacatcaccattgggcattgctgtaataaaaaatttg
gaacactgggaacaaattcttcaagatagaatggaccagtttgaaggcccaccaccaaac
tacatcaatacttatcctagtgacattggcataggtgcaggaccagctattctccgcaat
aaagcaatgattgaaccagaaaacacaccattcaaatcaaaggattattcagcacttcca
gcaaaaaggctctggcattttcttgtgaagcaagaaattcttcaggagactttcataaga
tacatattcacaaagaaaagaaaacaaagtgagtctgtagaagatcgtgtggagcaggtc
aaacaaaactgcgtagcagaagatcacaaaaacaaggttgaagcagatcttggctaccct
ggaggaaaagcaaaaatcattcacaaagaatcagatatgataatggcatttgcagttaat
aaggcaaacagcaatgaaattgttttggcgtctacacatgatgttcaagaacttgatatt
tccgctctactggctgctcagtcatttatatggattggggaagaatatgacagagagtct
aaaagttctgatgatattgactttcgtggttctaccacaacactagctcagtctgctgca
tcatcttttggagccactcagatacagccatcttcgtctatgccatggttaggcagtggt
caaactagcactggagctggtgtgcttattaaaagaaatctgaataatgtcaagagaatg
gcttcacatccagtccatcagtattatcttacaggagcacaagatggtagtgttcgaatg
tttgagtggacaaggccacagcaattggtatgcttccagcaggctgggaatgccagggtt
acaagaatgtatttcaattcccagggcaataaatgcggtgttgctgatggtgaaggattt
ctaagtatttggcaagtaaaccaaaccacctcaaatcctaaaccctatctgagttggcag
tgccacagtaaaaccacaagtgactttgcatttataacctcctcaagcctagttgctaca
tcgggacagtccaatgataacagaaatgtgtgcctctgggacagtttggcttcatctggt
aacaatcttatacatgccttcacttgccatgatcacggtgcaacagtacttcagtacgca
cctaaacatcaactgctaatttctggaggtaggaagggatacatctgcatctttgacatc
agacagaggcaactcctttacaccttccatgcgcacgagtcagctgtgaaggcccttgcc
ctggacccttctgaggactattttgtcacaggctcagcagaaggcaacatgaaggtgtgg
agactgactggctataatttaattcattcatttaaaaatgaacatgctaagcagtccatt
ttcagaaacattggtgctggtgtcacccagattgaaactgtgcaaggcaatcgtattttc
tcctgtggagcagatggcacactgaaaatgagggttcttcccaatgctttcaatgtacct
tcaagcatttctgacactctgtag
DBGET
integrated database retrieval system
