Strigops habroptila (Kakapo): 115612662
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Entry
115612662 CDS
T08851
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115612662 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115612662 (ATRX)
03036 Chromosome and associated proteins [BR:
shab03036
]
115612662 (ATRX)
Transcription factors [BR:
shab03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
115612662 (ATRX)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
115612662 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
115612662
NCBI-ProteinID:
XP_030353091
LinkDB
All DBs
Position
9:complement(25182717..25264325)
Genome browser
AA seq
2424 aa
AA seq
DB search
MTAEPVSESKLNTLVQKLHDFLAHSSEESEDANSPPALSKTKTIGKSREPKSSPASMENN
REEGSSSSERTKSLGSSRSKRKPTVVTKYVGSDDEQILDETVNEDISNENSENDVDMQSL
PKGTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEAPKKRGEEGLHGIVSCTACGQQVN
HFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAF
CKKCILRNLGRKELSTILDENNQWHCYICHPEPLLDLVTACDSVFENLEQLLQQNKKKIR
VESEKSKIYDHTVKFSPKRNNSSCNGEEKKIDDSYSGSLTYSYKALLVPKDLLKKTKKLV
ETTANLNSSFVNFLKNAAENVEKSPAMQLCQLKAFKSVLNDMKKAHLALKEGLNLEIQAL
NVKLKDKNTKEKKPDVRSEKNEVKKDEGKEHVALKEDDALKTQKKVVSEEPESEPMDQSV
PAVEQTDNKRTSGEEKKSGRSEEPQYEPNSTEALDMDIVSIPSSVPEDIFETLESAMEIQ
IASDEQDNGNTGPDHETLNSNAKLNTPVKDTKGGTKLKSSAKGTKELIVKLTPVSISEST
VKAEDQDSNLEKGGKDADVVPKAENCDSVKQNHNAGSEPSTENETVSPVEESDLRRSPRV
KTTPLRRQTDISPLTSNSEEDSNDTCNEKRKRKSSKQPRGKNDKRNSSDSTADGPRPNKL
SKSKKPYASEHSSDSDEMPAVLKEVAMMSRSSSDIDSNSEAPTNDQKTSKFLKNQPVKDE
NGKRKRKSSSSGSDLDAKRGKSAKNPAAAKKKRQNYSDSSNYDSELEKEIKILSKIESAK
KAKKKYSRKEDSYDSSEEEQRKKVNSKRRINLKKQRAKSSEDDGAEKSSPEKEMNHSSKD
KKLGKGSAAKERTNRDLKENAAKGKHDESSDVEKSSVEKEESSKGVKLTEVEKGKDLKKK
KAQEDSSSESTEKSVKKEHDSDSSKDRLKNKKESESKVKKSEKLKTESYKKEQDDSSSDV
EKSSPEKGSCNSSENDKTKNKPVVKDKKRRNLRERVSKRVQLDLSSDAEKSPLKEESSSE
DVVRRKTHAETKEKKKISHKKKISKKEQNDSSSSDEESYEDNKKKMKRGSMKESKKGNLK
KKVSKKVVVTSSSSSDKEENDEQNSTGDGSSDEQKIMPVTENLMLSAGTGFCQSSGDEGE
TKSRAVPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDASSDDDSDKGKKKTGKQIE
NTGDDEENEKEDNSESDSEEEEESKKPRYRHRLLRHKLTVSDGESGEEKKAKPKEKKEGK
RRNRRKVSSDDSNDSEFHESAVSEEVSESEDDQRPRTRSAKKAEAEENQRSYKQKKKRRR
IKVQEDSSSENNNKSNSENEENDDSKSPGKGRKKIRKIIKDDKLRTETQNALKEEEERRK
RIAEREREREKLREVIEIEDASPLKCPITTKLVLDEDEETKEPLVQVHRSIVTRLKPHQV
DGVQFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFRTALVV
CPLNTALNWLNEFEKWQEGLEDDEKLEVCELATVKRPQERSYMLQRWQDDGGVMIIGYEM
YRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRII
LTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTLVDVRVMKKRAH
ILYEMLAGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQCKLYQYYLDHLTGVGGSNEGGR
GKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDDFIASDSDETSMSLSSD
DYAKKKKSKGKKAKKECSSSGSGSDNDVEVIKVWNSRSRGGGEGNAEELGNNPASVTKSE
EGKATSSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSL
ISLDLIEDFLELANREKTEKPIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETNV
RGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQNKPVFVYRFLAQ
GTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDT
PMLPKDTILAELLQIHKEYIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMR
FNMPAGTNMLPTNFNSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAARIQ
PLEDIISTIWKENVTLTESQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQRI
LMNRRLQQQYNQQQQQQMSYQQAAMSHLMMPKPPNLIMNPSNYQQIDMRGMYQSVSGGMQ
PPPLQRAPPPMRGKNPGPSQGKSM
NT seq
7275 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagagcccgtgagtgaaagcaagttgaatacgttagtgcagaaacttcatgac
ttcttggctcactcatcagaagaatctgaggacgcaaactctcctccagcgttatctaaa
accaaaaccataggtaaaagtagagaacctaaaagtagcccagcatcaatggagaacaac
agagaagagggcagtagttcttcagaaagaaccaaatccttgggatcatcacgttcaaaa
aggaaacctacagttgtaacaaaatatgttggatcagatgatgaacaaatcttagatgaa
actgtaaatgaagatatttcaaatgaaaactcagaaaacgatgttgatatgcaaagcttg
cctaaaggtacagtggttgtacagcctgagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaaataccgttaaaatgaaacctgaagctcccaaaaag
cgtggagaggaaggactacatggaattgtaagctgtacagcttgtggccaacaggtgaac
cattttcaaaaggattcaatctatagacatcctacactgaaagttcttatttgtaagact
tgctacaaatattacatgagcgatgacattagccgtgattctgatggaatggatgaacag
tgtaggtggtgtgctgaaggtggaaatctgatttgctgtgacttctgccataacgccttc
tgtaaaaagtgcattttgcgcaacctgggtcgaaaggagctatcgactatactggatgag
aataaccagtggcactgttatatttgccatccagagcctttattggacttggtcactgca
tgtgacagtgtctttgaaaatctagaacagttactgcaacaaaacaaaaaaaagatcaga
gttgaaagtgaaaaaagtaaaatctatgatcacacagtcaagttttctccaaagagaaat
aactcaagttgtaacggggaagaaaaaaaaatagatgattcctattcgggttcactaacg
tattcttataaagcactcctggtgccaaaagacttgcttaagaaaacaaaaaagctggtt
gaaacgacagcaaatctcaattctagctttgtaaactttttgaaaaacgctgcagaaaat
gtagaaaaaagcccagctatgcaactttgtcagctaaaagcttttaaatctgtgttgaat
gacatgaaaaaagctcatctggcactaaaagaaggtctgaacctggaaattcaagctttg
aatgttaaactcaaagataaaaataccaaagagaaaaaacctgatgttagatcagaaaaa
aacgaggtgaaaaaagatgaaggaaaggaacatgtggcattaaaagaggacgacgctcta
aagacacagaagaaagttgtatcagaagagcctgagagtgagcccatggatcaaagtgtt
ccagcagtggaacaaacggataacaagcgtacttctggtgaagagaaaaagtctggcaga
agcgaagaacctcagtatgaacctaatagtacagaggcgttagacatggatatagtgtcc
attccctcatctgttcctgaagatatttttgagactctggaatctgctatggagattcag
attgcatcagatgagcaagacaatggaaatacaggacctgatcatgagactctaaattca
aatgcaaaattgaacactcctgtgaaagataccaaaggtggtaccaagttaaaatcatca
gctaaaggaacaaaagaattgattgtaaaattgactcctgtttccatttcagagtctaca
gttaaagctgaagatcaggacagcaatctagaaaagggaggtaaggatgcagatgtagta
cctaaagcagaaaactgtgattctgtaaagcaaaaccataatgctggcagtgagccttcc
acagagaatgaaactgtctcccctgtagaggaatctgatctcaggagatcaccacgtgtg
aagaccacaccgctgaggcgccaaacagacatcagtcctttaacgtcaaactcggaagaa
gacagcaatgacacgtgtaatgaaaaacgcaagagaaaatcatcaaagcaaccaaggggg
aaaaatgacaaaagaaattcctctgacagtactgctgatggtcccaggcctaataaactt
tctaaatccaaaaagccatatgcatcagagcacagctcggactctgatgagatgccagct
gttcttaaagaagtagctatgatgagccgcagttcttcagacattgatagcaatagtgaa
gccccaacgaatgatcagaagacgtcaaaatttctaaagaatcaaccagtgaaggatgaa
aacggcaaacgaaaaagaaaaagttccagctctgggtcagatttggatgctaaaagaggc
aaatcagcaaaaaatcctgccgctgctaaaaagaaacgacagaactattcggattcttca
aactatgattctgagttagaaaaagaaataaaaatcctgagtaaaattgagtctgcaaaa
aaagctaagaaaaaatactcccgaaaagaagatagttacgattcctctgaggaagagcag
aggaaaaaggtaaatagtaagagaaggataaatctgaagaagcagagagctaaatcttct
gaagatgacggtgctgaaaagtcttccccagagaaggagatgaatcattcttctaaagat
aaaaaacttggcaaggggtcagctgctaaggaaaggacaaacagagacttaaaagaaaac
gctgcaaagggaaagcatgatgagtcttctgatgttgagaagtcttcagtggagaaagag
gagagttctaaaggtgtgaagctaactgaagttgagaagggcaaggatttgaaaaagaaa
aaggcacaagaagattcgtcttcagagagcactgagaaatctgtgaagaaagagcacgat
tctgattcttcgaaagacagattgaagaataaaaaggaatcagaaagcaaagtgaagaaa
tctgaaaaactgaaaacagaaagttacaagaaagaacaagatgattcctcttccgatgtt
gaaaagtcatctccagagaaaggaagttgcaattcttctgagaatgacaaaacgaagaat
aagccagtggtgaaagataagaaaaggaggaatttaagagagagagtatctaagagagtg
cagcttgatttatcctctgatgctgagaaatctcccctaaaagaggagagttcctctgaa
gatgtcgtgaggaggaaaacccacgctgaaactaaagaaaagaagaaaatcagtcacaaa
aagaaaatttccaagaaggaacagaatgactcgtcctcttctgatgaggagtcttatgaa
gacaataagaaaaagatgaaaagagggtcaatgaaagaaagtaaaaagggtaacttaaaa
aagaaagtgtcaaaaaaggtggttgtcacttcctcttcctcgtctgataaggaagaaaat
gatgaacagaattcaacaggtgatggaagcagcgatgagcagaaaattatgccagtgact
gaaaacttaatgttgtctgctggtacaggattttgtcagtcatcaggagatgagggagag
actaaatcaagggctgttccaatggaggaggaggaagatgatgatgatgacgatcctgag
aatagaattgccaagaaaatgcttttagaagaaatcaaagccaatctttcctctgatgag
gatgcatcttcagatgatgactcggataaaggaaaaaagaaaactggaaagcaaattgaa
aacacaggagatgatgaagagaatgaaaaggaagataattctgaatcagattcagaggag
gaagaagaatccaagaagcctcgatacagacacaggctgctgaggcacaagctgacagtg
agcgacggagaatctggtgaagaaaaaaaggcaaaaccaaaagagaaaaaagaagggaag
cgcagaaatagaaggaaagtgagcagcgacgattcaaatgactccgagtttcatgaatct
gcagttagcgaagaggtcagtgagtctgaagatgaccagcgtccaagaacaagatctgcc
aagaaagctgaggcagaagagaaccagcgcagttacaagcagaaaaagaaacgaaggcgt
atcaaggttcaggaggattcttcaagtgaaaacaacaataagagtaattctgagaatgag
gaaaatgatgattccaaatctcctggaaaaggcaggaagaaaataaggaaaattattaaa
gatgataagcttagaacagagacacaaaatgcacttaaagaagaagaagaaagaagaaaa
cgtatagcagaaagagaacgggagagagagaaactgagagaggtgatagagatagaagat
gcttcacctctgaaatgtcccattacaactaagctggttttggatgaagatgaagaaacc
aaagaaccattagtgcaggttcacaggagtatagttaccagactgaaaccacaccaagta
gatggtgttcagttcatgtgggattgctgttgtgaatctgttaaaaaaaccaagacatct
cctggttctggatgcattctcgctcactgtatgggtctggggaaaacgttacaggtagtg
agttttcttcacacagtcttgctctgtgacaagctggattttcggacagctcttgtagtg
tgtccactgaacactgccttgaactggttgaatgagttcgagaaatggcaagaaggttta
gaagatgatgaaaaactagaggtctgtgaactagcaactgtgaaacgccctcaagagaga
agctacatgctccagcgttggcaggatgatggaggtgtgatgataataggctatgagatg
tatcggaatcttgcacaaggcaggaatgtgaagagtaggaaacttaaagaaatatttaat
aaagctttagttgatccaggccccgactttgttgtttgtgatgaagggcacatactaaaa
aacgaagcatctgctgtttccaaggcaatgaattctattcgatccaggagaagaataatt
cttacaggaacaccactgcaaaataatcttatagaatatcactgcatggttaactttatt
aaggagaatttgcttggttcaattaaggaattccgaaatcgatttataaatccaatccag
aacggtcagtgcgcagactctactctggtggatgtcagagtaatgaagaagcgtgcacat
attctctatgagatgttagctggatgtgttcagaggaaagattacacagcattaacaaag
ttcctcccaccaaaatacgagtatgttctagaagttcggatgacacctattcagtgcaaa
ctctaccaatactacttggatcatttgacaggtgtaggtggtagcaatgaaggtggaaga
ggcaaggctggagctaaactattccaggatttccagatgttgagcagaatctggactcac
ccttggtgtttgcagctggactatattagcaaagaaaataagggctattttgatgaagac
agtatggatgacttcatcgcttcagattccgatgaaacttcaatgagcttaagttctgat
gattatgccaagaaaaaaaaatccaaggggaaaaaagcaaagaaagagtgtagctcaagc
ggaagcggcagcgataacgatgttgaagtcattaaagtctggaattcaagatctcgggga
ggtggagaaggaaatgcagaagaacttggaaacaaccctgcatctgttacaaaatcagag
gaaggcaaagctacatcctcttccaaccctggtagcccagcgccagattggtacaaagat
tttgtcactgatgcagatgctgaagtgttggaacattctgggaagatggtgcttctcttt
gaaatccttcgaatggcagaggagcttggagacaaagtcctagtgtttagccagtcccta
atatctctggatttgatagaagattttctggagctggccaacagggagaaaactgagaag
cctatttataaaggtgaaggaaaatggttcagaaacattgattactatcgcttagatggt
tcaactacagctcagtcaagaaagaaatgggctgaggaatttaatgatgaaactaatgtg
agaggccgcttgtttattatatccactaaagcaggttccctcggaattaatctcgtggct
gctaacagagtaatcatctttgatgcatcttggaacccatcctatgacatccagagtatt
ttcagggtttatcgctttgggcagaacaagcctgtgtttgtgtacaggtttttggctcag
ggaacaatggaagacaagatctatgatcgtcaggtaacaaagcagtcattgtctttccgg
gttgtcgaccaacagcaagtggaacgtcattttactatgaatgagcttacagagctgtac
acctttgagccagatttgctggatgatcctaattcagaaaagaaaaagaagagagataca
ccaatgctgccaaaagacacaattctggccgaattgcttcaaatccataaagagtatata
gttggatatcacgaacatgattcactcctggaccataaggaggaagaggaactcactgaa
gaagaaaggaaggcagcgtgggcagaatatgaagcagaaaagaagggcttgaccatgcgt
ttcaatatgccagctgggaccaatatgcttcccacaaacttcaactctcaaactccatat
attcctttcaatttgggtgctctgtcagccatgagtaatcagcagctggaggaccttatt
aatcaaggcagagagaaagttgtggaagcaaccaacagtgtaactgcggcaagaattcag
ccccttgaagacatcatttcaaccatatggaaagaaaacgtaaccctcacagagagccaa
gtgcaggccctggcactaagcagacaggcaagccaggagcttgatgtcaagcgccgagaa
gccatctataacgacgtccttactaaacaacagatgttgatcagttgcgttcagaggata
cttatgaacagaagactacagcagcagtacaatcagcagcagcagcagcagatgtcgtac
cagcaagcagcaatgagtcacctcatgatgccaaagcctccaaatttgatcatgaatcct
tccaactaccaacagatagatatgagaggaatgtatcagtcagtgtctggtggtatgcag
ccaccaccattacaacgagcaccacccccaatgagaggcaaaaatccagggccttcccaa
gggaaatcaatgtga
DBGET
integrated database retrieval system
